BLASTX nr result

ID: Bupleurum21_contig00006030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006030
         (1425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632816.1| PREDICTED: protein KIAA0664 homolog [Vitis v...   326   1e-86
emb|CAN72877.1| hypothetical protein VITISV_010381 [Vitis vinifera]   325   2e-86
ref|XP_002517675.1| eukaryotic translation initiation factor 3 s...   272   1e-70
ref|XP_003533069.1| PREDICTED: uncharacterized protein LOC100801...   224   4e-56
ref|XP_003604357.1| Tetratricopeptide-like helical domain-contai...   223   1e-55

>ref|XP_003632816.1| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
          Length = 1702

 Score =  326 bits (835), Expect = 1e-86
 Identities = 188/381 (49%), Positives = 243/381 (63%), Gaps = 3/381 (0%)
 Frame = +1

Query: 1    GTPKPDASIASKGHLSVSDLLDFISPDQDAKGGDAQRK-RRAKVWPVGDKSQQVQNEEKS 177
            GTPKPDASIASKGHLSVSDLLD+ISPDQD+KGGDAQRK RRAKV  V DK  Q Q +  +
Sbjct: 1104 GTPKPDASIASKGHLSVSDLLDYISPDQDSKGGDAQRKQRRAKVVHVSDKFHQAQTDAMT 1163

Query: 178  SDAIVPASIETRSAATELSKVEDRPDMVVPKEPKDIGIGKYDSVFTE-EAVQEATSDEGW 354
             D ++  + E  +A  E +  E + D V PKEP D G  + +   T  E++QE  SDEGW
Sbjct: 1164 KDIVLHDNREKTTAVVEENTEEMKLDTVPPKEPTDNGNTRTEQTVTLIESIQETISDEGW 1223

Query: 355  QEANSKIRTGNGATRKYGRGRPDLAKLKIGKADYLNPRDSSHRREAMLQGKKTTPRTVLT 534
            QEANSK R+GN ++R+  R RP+LAKL + +++Y N R+SSHRRE     ++TTP+TV T
Sbjct: 1224 QEANSKGRSGNISSRRISRRRPELAKLNVSRSEYSNFRESSHRREINTSAQRTTPKTVST 1283

Query: 535  DPSKQRQPKILNSSSGEDTPKLQEKSLVSKISATQVSKVSPTXXXXXXXXXXXXXYKEVA 714
              +  +Q K+++  SGED  K Q K+ VSKIS+   +  +               YKEVA
Sbjct: 1284 HSAPLKQRKVISPCSGEDLNKPQAKTPVSKISSAPATLTA--------MASKSVSYKEVA 1335

Query: 715  VAPPGTVLKPLLEKVEDIKDVKTDTQICHS-PSEKLKENDNTKITLEEAIPDDKATKXXX 891
            VAPPGT+LKPLLEKVE+  + KT+ Q+ ++  + K +E+D   + +EEA+PDD+ TK   
Sbjct: 1336 VAPPGTILKPLLEKVEEKTEEKTEIQMSNTLETSKGEESDKVMVEVEEAVPDDEDTKGSA 1395

Query: 892  XXXXXXXXXXXXXXXXXVGKVEDSGDQDNSVETNGSKLSAAAEPFNPGGFPLTHPLTSVP 1071
                               +V    DQ+  +ETNGSKLSAAA PFNPG   L H L+S  
Sbjct: 1396 DGSVTESEKPASEPE----EVSSPDDQEKPMETNGSKLSAAAPPFNPGAHSLIHTLSSAA 1451

Query: 1072 VTSVYDVIASQGMLAEPVGFP 1134
            VTSVYDV ASQGMLAEP+  P
Sbjct: 1452 VTSVYDVTASQGMLAEPMELP 1472


>emb|CAN72877.1| hypothetical protein VITISV_010381 [Vitis vinifera]
          Length = 1658

 Score =  325 bits (832), Expect = 2e-86
 Identities = 187/381 (49%), Positives = 243/381 (63%), Gaps = 3/381 (0%)
 Frame = +1

Query: 1    GTPKPDASIASKGHLSVSDLLDFISPDQDAKGGDAQRK-RRAKVWPVGDKSQQVQNEEKS 177
            GTPKPDASIASKGHLSVSDLLD+ISPDQD+KGGDAQRK RRAKV  V DK  Q Q +  +
Sbjct: 1060 GTPKPDASIASKGHLSVSDLLDYISPDQDSKGGDAQRKQRRAKVVHVSDKFHQAQTDAMT 1119

Query: 178  SDAIVPASIETRSAATELSKVEDRPDMVVPKEPKDIGIGKYDSVFTE-EAVQEATSDEGW 354
             D ++  + E  +A  E +  E + D V PKEP D G  + +   T  E++QE  SDEGW
Sbjct: 1120 KDIVLHDNREKTTAVVEENTEEMKLDTVPPKEPTDNGNTRTEQTVTLIESIQETISDEGW 1179

Query: 355  QEANSKIRTGNGATRKYGRGRPDLAKLKIGKADYLNPRDSSHRREAMLQGKKTTPRTVLT 534
            QEANSK R+GN ++R+  R RP+LAKL + +++Y N R++SHRRE     ++TTP+TV T
Sbjct: 1180 QEANSKGRSGNISSRRISRRRPELAKLNVSRSEYSNFRENSHRREINTSAQRTTPKTVST 1239

Query: 535  DPSKQRQPKILNSSSGEDTPKLQEKSLVSKISATQVSKVSPTXXXXXXXXXXXXXYKEVA 714
              +  +Q K+++  SGED  K Q K+ VSKIS+   +  +               YKEVA
Sbjct: 1240 HSAPLKQRKVISPCSGEDLNKPQAKTPVSKISSAPATLTA--------MASKSVSYKEVA 1291

Query: 715  VAPPGTVLKPLLEKVEDIKDVKTDTQICHS-PSEKLKENDNTKITLEEAIPDDKATKXXX 891
            VAPPGT+LKPLLEKVE+  + KT+ Q+ ++  + K +E+D   + +EEA+PDD+ TK   
Sbjct: 1292 VAPPGTILKPLLEKVEEKTEEKTEIQMSNTLETSKGEESDKVMVEVEEAVPDDEDTKGSA 1351

Query: 892  XXXXXXXXXXXXXXXXXVGKVEDSGDQDNSVETNGSKLSAAAEPFNPGGFPLTHPLTSVP 1071
                               +V    DQ+  +ETNGSKLSAAA PFNPG   L H L+S  
Sbjct: 1352 DGSVTESEKPASEPE----EVSSPDDQEKPMETNGSKLSAAAPPFNPGAHSLIHTLSSAA 1407

Query: 1072 VTSVYDVIASQGMLAEPVGFP 1134
            VTSVYDV ASQGMLAEP+  P
Sbjct: 1408 VTSVYDVTASQGMLAEPMELP 1428


>ref|XP_002517675.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223543307|gb|EEF44839.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1454

 Score =  272 bits (696), Expect = 1e-70
 Identities = 164/380 (43%), Positives = 222/380 (58%), Gaps = 2/380 (0%)
 Frame = +1

Query: 1    GTPKPDASIASKGHLSVSDLLDFISPDQDAKGGDAQRK-RRAKVWPVGDKSQQVQNEEKS 177
            GTPKPDASIASKGHLSVSDLLD+ISPDQD++G +AQRK RR KV    DK  Q   +E  
Sbjct: 868  GTPKPDASIASKGHLSVSDLLDYISPDQDSRGSEAQRKQRRVKVLQNSDKGHQ---DETV 924

Query: 178  SDAIVPASIETRSAATELSKVEDRPDMVVPKEPKDIG-IGKYDSVFTEEAVQEATSDEGW 354
             DA+V   +E  ++    +  E + +++  +E +  G +  + S+   E V+E T+DEGW
Sbjct: 925  EDAMVHDGMENATSLVNGNSEEVKLEIIQIEESEKKGNVAIHSSIVASEVVEEMTTDEGW 984

Query: 355  QEANSKIRTGNGATRKYGRGRPDLAKLKIGKADYLNPRDSSHRREAMLQGKKTTPRTVLT 534
            QEAN + R GN A RK GR RP L KL + ++DY N RDS+HRRE +    K+  R + T
Sbjct: 985  QEANPRGRLGNAAGRKSGRRRPALEKLNVNRSDYSNFRDSNHRRELISSAPKSISRAMTT 1044

Query: 535  DPSKQRQPKILNSSSGEDTPKLQEKSLVSKISATQVSKVSPTXXXXXXXXXXXXXYKEVA 714
            +    +Q K+  +S  ED+ KLQ+K+ V K  ++  S  +               YKEVA
Sbjct: 1045 ELIPPKQSKLRGTSVMEDSVKLQQKACVPKPLSSPASVTT--------MASKSVSYKEVA 1096

Query: 715  VAPPGTVLKPLLEKVEDIKDVKTDTQICHSPSEKLKENDNTKITLEEAIPDDKATKXXXX 894
            VAPPGTVLKP LE VE+      + + C    E + E  +  I++ + + D+  T     
Sbjct: 1097 VAPPGTVLKPSLEMVEESNVKTPEGETCSIQCEMVNEEGSKNISVADNLLDNADT----- 1151

Query: 895  XXXXXXXXXXXXXXXXVGKVEDSGDQDNSVETNGSKLSAAAEPFNPGGFPLTHPLTSVPV 1074
                            + ++  S +Q+ S ETNGSKLSAAAEPFNPG   + HP+ SV V
Sbjct: 1152 DGIGDSGTQSENSSSELDEISSSYNQEKSNETNGSKLSAAAEPFNPGALSMVHPVNSVAV 1211

Query: 1075 TSVYDVIASQGMLAEPVGFP 1134
            TS+YDV ASQGML+EPV  P
Sbjct: 1212 TSIYDVRASQGMLSEPVAPP 1231


>ref|XP_003533069.1| PREDICTED: uncharacterized protein LOC100801625 [Glycine max]
          Length = 1640

 Score =  224 bits (571), Expect = 4e-56
 Identities = 162/394 (41%), Positives = 217/394 (55%), Gaps = 19/394 (4%)
 Frame = +1

Query: 1    GTPKPDASIASKGHLSVSDLLDFISPDQDAKGGDAQRK-RRAKVWPVGDKSQQVQNEEKS 177
            GTPKPDASIASKGHLSVSDLLDFISP  D KG DA+ K RRAK+    D + Q  ++  +
Sbjct: 1053 GTPKPDASIASKGHLSVSDLLDFISP--DPKGNDARSKQRRAKILSTSDDNSQEHDDAIA 1110

Query: 178  SDAIVPASIETRSAATELSKVED---RPDMVVPKEPKDIGIGKYDSVFTEEAVQEATSDE 348
            +++I+  + +   + TE+ K+E+   + D  V KE  D    +Y  V T E V EA+SDE
Sbjct: 1111 NESILFDNSKDAPSMTEV-KIEETNGKLDSQVQKENGD--FTRYGPV-TSEPVYEASSDE 1166

Query: 349  GWQEANSKIRTGNGATRKYG-RGRPDLAKLKIGKADYLNPRDSSHRREAMLQGKKTTPRT 525
            GWQEANSK R+GN A RK+G R RP L+KL +  ++    R+ S R E     ++  P+ 
Sbjct: 1167 GWQEANSKGRSGNAANRKFGHRKRPHLSKLSVNGSNNYIYREGSSRNEITSPPQRGVPKV 1226

Query: 526  VLTDPSKQRQPKILNSSSGEDTPKLQEKSLVSKISATQVSKVSPTXXXXXXXXXXXXXYK 705
            +L   S  RQ K  N +  ED+     K+ VSKIS+  +S ++               YK
Sbjct: 1227 MLDMSSPSRQSKSRNLTLNEDSVNHSTKASVSKISSPALSSLA----------SKSISYK 1276

Query: 706  EVAVAPPGTVLKPLLEKVEDIKDVKTDTQIC--------------HSPSEKLKENDNTKI 843
            EVA+APPGTVLKPLLEK E +  V  + +IC               S +  + +ND T+ 
Sbjct: 1277 EVALAPPGTVLKPLLEKAE-MDKVNAEDEICGNIAVTSINEGTCQSSITNTVSQNDETEE 1335

Query: 844  TLEEAIPDDKATKXXXXXXXXXXXXXXXXXXXXVGKVEDSGDQDNSVETNGSKLSAAAEP 1023
            T  E  P  +++                     + KV  + DQ+   ETNGSKLSAAA+P
Sbjct: 1336 T-HEIEPQQESS------------------GSELEKV-CASDQEKPTETNGSKLSAAAKP 1375

Query: 1024 FNPGGFPLTHPLTSVPVTSVYDVIASQGMLAEPV 1125
            FNPG   ++H L S   TS+YD   SQGM  EPV
Sbjct: 1376 FNPGMLSMSHHLNSASFTSMYDTDVSQGMHVEPV 1409


>ref|XP_003604357.1| Tetratricopeptide-like helical domain-containing protein [Medicago
            truncatula] gi|355505412|gb|AES86554.1|
            Tetratricopeptide-like helical domain-containing protein
            [Medicago truncatula]
          Length = 1663

 Score =  223 bits (568), Expect = 1e-55
 Identities = 159/378 (42%), Positives = 198/378 (52%), Gaps = 3/378 (0%)
 Frame = +1

Query: 1    GTPKPDASIASKGHLSVSDLLDFISPDQDAKGGDAQRK-RRAKVWPVGDKSQQVQNEEKS 177
            GTPK D SIASKGHLSVSDLLDFISPD D+KG DAQRK RR K+ P+ D + Q  ++   
Sbjct: 1100 GTPKTDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQRRPKILPISDNNSQEHDDTPI 1159

Query: 178  SDAIVPASIETRSAATELSKVEDRPDMVVPKEPKDI-GIGKYDSVFTEEAVQEATSDEGW 354
             D IV       +A     K+E+       +EPK I  +  +  V T EAV E +SDEGW
Sbjct: 1160 VDDIVIVDNAKDAAKAVEGKIEEPKAKHGTEEPKKIVDLSMHKPVVTVEAVYETSSDEGW 1219

Query: 355  QEANSKIRTGNGATRKYG-RGRPDLAKLKIGKADYLNPRDSSHRREAMLQGKKTTPRTVL 531
            QEANSK R+GN A RK G R RP L+KL +  +D    +++S+R +  L  +K  P+   
Sbjct: 1220 QEANSKGRSGNAANRKSGRRQRPVLSKLTVKGSDNHMYKEASYRNDTTLH-QKAAPKVAS 1278

Query: 532  TDPSKQRQPKILNSSSGEDTPKLQEKSLVSKISATQVSKVSPTXXXXXXXXXXXXXYKEV 711
               S  R+ K         TP    K+L SKIS+T  S  S               YKEV
Sbjct: 1279 AMLSPSRKSK---------TP----KALSSKISSTPASLSS--------LASKSISYKEV 1317

Query: 712  AVAPPGTVLKPLLEKVEDIKDVKTDTQICHSPSEKLKENDNTKITLEEAIPDDKATKXXX 891
            A APPGTVLKPLLEK E  K V  + ++  +       N +T    +E  P D  T    
Sbjct: 1318 AAAPPGTVLKPLLEKTETEK-VNDENEMPKNEGSVETSNADTVPQKDEKEPSDADT---- 1372

Query: 892  XXXXXXXXXXXXXXXXXVGKVEDSGDQDNSVETNGSKLSAAAEPFNPGGFPLTHPLTSVP 1071
                             + KV  S DQ  S ETNGSKLSAAA+PF+PG    +  L  VP
Sbjct: 1373 --DPQQDESEQDNSSSELEKVSPSSDQAKSSETNGSKLSAAAKPFSPGTLSASRHLNPVP 1430

Query: 1072 VTSVYDVIASQGMLAEPV 1125
              S+YD   S G+L EPV
Sbjct: 1431 PASIYDANVSPGILVEPV 1448


Top