BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006009
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...   232   6e-59
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...   231   1e-58
ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ...   229   5e-58
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin...   226   3e-57
ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Sela...   223   2e-56

>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  232 bits (591), Expect = 6e-59
 Identities = 105/110 (95%), Positives = 108/110 (98%)
 Frame = -2

Query: 665 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEAADNNCVYRNEIHHSVGERTQVLQ 486
           MSTMKFCRECNNILYPKED+EQKILLYACRNCDHQE A+NNCVYRNEIHHSVGERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQ 60

Query: 485 DVAADPTLPRTKSVRCAVCNHGEAVFFQATARGEEGMTLFFVCCNPNCGH 336
           DVAADPTLPRTKSVRCA CNHGEAVFFQATARGEEGMTLFFVCCNPNCG+
Sbjct: 61  DVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGY 110


>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score =  231 bits (589), Expect = 1e-58
 Identities = 103/110 (93%), Positives = 108/110 (98%)
 Frame = -2

Query: 665 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEAADNNCVYRNEIHHSVGERTQVLQ 486
           MSTMKFCRECNNILYPKED+++KILLYACRNCDHQE ADNNCVYRNEIHH+VGERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ 60

Query: 485 DVAADPTLPRTKSVRCAVCNHGEAVFFQATARGEEGMTLFFVCCNPNCGH 336
           DVAADPTLPRTK+VRCA CNHGEAVFFQATARGEEGMTLFFVCCNPNCGH
Sbjct: 61  DVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGH 110


>ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula]
           gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase,
           subunit C11/M/9 [Medicago truncatula]
           gi|217075262|gb|ACJ85991.1| unknown [Medicago
           truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA
           polymerase II subunit RPB9 [Medicago truncatula]
           gi|388497558|gb|AFK36845.1| unknown [Medicago
           truncatula]
          Length = 114

 Score =  229 bits (583), Expect = 5e-58
 Identities = 104/110 (94%), Positives = 106/110 (96%)
 Frame = -2

Query: 665 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEAADNNCVYRNEIHHSVGERTQVLQ 486
           MSTMKFCRECNNILYPKED+EQKILLYACRNCDHQEAADN CVYRNEIHHSV ERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60

Query: 485 DVAADPTLPRTKSVRCAVCNHGEAVFFQATARGEEGMTLFFVCCNPNCGH 336
           DVAADPTLPRTK+VRC  CNHGEAVFFQATARGEEGMTLFFVCCNPNCGH
Sbjct: 61  DVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGH 110


>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
           gi|255627167|gb|ACU13928.1| unknown [Glycine max]
          Length = 114

 Score =  226 bits (576), Expect = 3e-57
 Identities = 101/110 (91%), Positives = 106/110 (96%)
 Frame = -2

Query: 665 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEAADNNCVYRNEIHHSVGERTQVLQ 486
           MS MKFCRECNNILYPKED++QK+LL+ACRNCDHQE ADN CVYRNEIHHSVGERTQVLQ
Sbjct: 1   MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQ 60

Query: 485 DVAADPTLPRTKSVRCAVCNHGEAVFFQATARGEEGMTLFFVCCNPNCGH 336
           DVAADPTLPRTKSVRC+ CNHGEAVFFQATARGEEGMTLFFVCCNPNCGH
Sbjct: 61  DVAADPTLPRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGH 110


>ref|XP_002976415.1| hypothetical protein SELMODRAFT_232741 [Selaginella moellendorffii]
           gi|302811122|ref|XP_002987251.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300145148|gb|EFJ11827.1| hypothetical protein
           SELMODRAFT_125489 [Selaginella moellendorffii]
           gi|300156045|gb|EFJ22675.1| hypothetical protein
           SELMODRAFT_232741 [Selaginella moellendorffii]
          Length = 115

 Score =  223 bits (569), Expect = 2e-56
 Identities = 99/110 (90%), Positives = 104/110 (94%)
 Frame = -2

Query: 665 MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEAADNNCVYRNEIHHSVGERTQVLQ 486
           MSTMKFCRECNNILYPKED++QKILLYACRNCDHQE ADNNCVYRNE+HHS GERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNEVHHSAGERTQVLQ 60

Query: 485 DVAADPTLPRTKSVRCAVCNHGEAVFFQATARGEEGMTLFFVCCNPNCGH 336
           DVA+DPTLPRTKSVRC  C HGEAVFFQAT RGEEGMTLFFVCCNPNCG+
Sbjct: 61  DVASDPTLPRTKSVRCVRCKHGEAVFFQATTRGEEGMTLFFVCCNPNCGY 110