BLASTX nr result

ID: Bupleurum21_contig00006005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00006005
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278077.1| PREDICTED: uncharacterized protein LOC100264...    93   3e-17
emb|CAN82449.1| hypothetical protein VITISV_006434 [Vitis vinifera]    92   6e-17
ref|XP_002281841.1| PREDICTED: uncharacterized protein LOC100260...    74   1e-11
emb|CBI27810.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002516276.1| conserved hypothetical protein [Ricinus comm...    59   6e-07

>ref|XP_002278077.1| PREDICTED: uncharacterized protein LOC100264608 [Vitis vinifera]
          Length = 275

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 54/107 (50%), Positives = 69/107 (64%)
 Frame = -1

Query: 477 MSIAFESNNNDRIDRSGYVHGMKFKSIYDPADSGRFTGDRMLKSSPAVVSERADEADSCS 298
           MSIAFES     I+RSG+VHGM   SI+D  ++G F+ DR     P+ V ER +  DSCS
Sbjct: 1   MSIAFESGGGSGIERSGFVHGMSCISIFDSPEAGVFSSDRRF---PSGVEEREEGLDSCS 57

Query: 297 SSSIGKNSDVTXXXXXXXXXXXXXEVQSSFKGPLDCLDSLEEVLPVK 157
           SSSIG+NSD +             EVQSS+KGPL+ +D+LE+VL VK
Sbjct: 58  SSSIGRNSDAS-GGSSEGEDSGETEVQSSYKGPLETMDALEDVLVVK 103


>emb|CAN82449.1| hypothetical protein VITISV_006434 [Vitis vinifera]
          Length = 275

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 54/107 (50%), Positives = 68/107 (63%)
 Frame = -1

Query: 477 MSIAFESNNNDRIDRSGYVHGMKFKSIYDPADSGRFTGDRMLKSSPAVVSERADEADSCS 298
           MSIAFES     I+RSG+VHGM   SI+D  ++G F  DR     P+ V ER +  DSCS
Sbjct: 1   MSIAFESGGGSGIERSGFVHGMSCISIFDSPEAGVFXXDRRF---PSGVEEREEGLDSCS 57

Query: 297 SSSIGKNSDVTXXXXXXXXXXXXXEVQSSFKGPLDCLDSLEEVLPVK 157
           SSSIG+NSD +             EVQSS+KGPL+ +D+LE+VL VK
Sbjct: 58  SSSIGRNSDAS-GGSSEGEDSGETEVQSSYKGPLETMDALEDVLVVK 103


>ref|XP_002281841.1| PREDICTED: uncharacterized protein LOC100260963 [Vitis vinifera]
           gi|147857682|emb|CAN82883.1| hypothetical protein
           VITISV_008557 [Vitis vinifera]
          Length = 281

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
 Frame = -1

Query: 477 MSIAFESNNNDRIDRSGYVHGMKFKSIYDPADSGRFTGDRMLKSS---PAVVSERADEAD 307
           MSIA + ++N RI+ SG++HGM   SI++  +    TGDR   +     A   ER +E D
Sbjct: 1   MSIALDRSSN-RIEGSGFMHGMSCISIFESPEL--LTGDRRFPAGGEMAAKAEEREEELD 57

Query: 306 SCSSSS-IGKNSDVTXXXXXXXXXXXXXEVQSSFKGPLDCLDSLEEVLPVK 157
           SCSSSS IGKNSDV+              VQSS+K PLD +++LEEVLP++
Sbjct: 58  SCSSSSSIGKNSDVSGMSSDQEDSGETE-VQSSYKRPLDSMNALEEVLPLR 107


>emb|CBI27810.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 39/82 (47%), Positives = 52/82 (63%)
 Frame = -1

Query: 402 SIYDPADSGRFTGDRMLKSSPAVVSERADEADSCSSSSIGKNSDVTXXXXXXXXXXXXXE 223
           SI+D  ++G F+ DR     P+ V ER +  DSCSSSSIG+NSD +             E
Sbjct: 5   SIFDSPEAGVFSSDRRF---PSGVEEREEGLDSCSSSSIGRNSDAS-GGSSEGEDSGETE 60

Query: 222 VQSSFKGPLDCLDSLEEVLPVK 157
           VQSS+KGPL+ +D+LE+VL VK
Sbjct: 61  VQSSYKGPLETMDALEDVLVVK 82


>ref|XP_002516276.1| conserved hypothetical protein [Ricinus communis]
           gi|223544762|gb|EEF46278.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 238

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
 Frame = -1

Query: 477 MSIAFESNNNDRIDRSGYVHGMKFKSIYDPADSGRFTGDRMLKSSPAVVSERADEAD--- 307
           MSIAFE ++ D I  S Y+H +  + +      G F  D+     PAV   R +E D   
Sbjct: 1   MSIAFERSSGDSIQNSAYIHRIPPRFL-----GGVFREDQRF---PAVERRREEEEDDDS 52

Query: 306 -----SCSSSSIGKNSDVTXXXXXXXXXXXXXEVQSSFKGPLDCLDSLEEVLPVK 157
                S SSSSI +N+D               EV SSFKGPLD +++LEEVLP+K
Sbjct: 53  TSSSSSSSSSSIVRNND------------EESEVDSSFKGPLDTMNTLEEVLPIK 95


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