BLASTX nr result

ID: Bupleurum21_contig00005974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005974
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278564.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   299   9e-79
ref|XP_002513536.1| ubiquitin-conjugating enzyme E2 C, putative ...   290   6e-76
ref|XP_004140207.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   284   2e-74
ref|NP_001238641.1| uncharacterized protein LOC100527864 [Glycin...   283   4e-74
ref|XP_002314089.1| predicted protein [Populus trichocarpa] gi|1...   282   1e-73

>ref|XP_002278564.1| PREDICTED: ubiquitin-conjugating enzyme E2 19 [Vitis vinifera]
            gi|147820972|emb|CAN74597.1| hypothetical protein
            VITISV_003479 [Vitis vinifera]
            gi|297734957|emb|CBI17191.3| unnamed protein product
            [Vitis vinifera]
          Length = 177

 Score =  299 bits (765), Expect = 9e-79
 Identities = 147/170 (86%), Positives = 153/170 (90%), Gaps = 4/170 (2%)
 Frame = +3

Query: 579  NNNRQMNN----VASAKQPLPTVNSVDTQSVLKRLQSELMSLMMSGDPGVSAFPEEDNIF 746
            NN+ Q NN    VA+ KQPLP   SVDTQSVLKRLQSELM+LMMSGD G+SAFPEEDNIF
Sbjct: 5    NNSYQDNNNNPAVAATKQPLPPAKSVDTQSVLKRLQSELMALMMSGDGGISAFPEEDNIF 64

Query: 747  VWKGTITGSKDTVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDIYGNICLDILQD 926
             WKGTI GSKDTVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVD+YGNICLDILQD
Sbjct: 65   CWKGTINGSKDTVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDVYGNICLDILQD 124

Query: 927  KWSSAYDVRTILISIQSLLGEPNTSSPLNNQAAALWENQEEYRKMVEKLY 1076
            KWSSAYDVRTIL+SIQSLLGEPN SSPLN QAAALW NQEEYRKMV KLY
Sbjct: 125  KWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAALWSNQEEYRKMVMKLY 174


>ref|XP_002513536.1| ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis]
            gi|223547444|gb|EEF48939.1| ubiquitin-conjugating enzyme
            E2 C, putative [Ricinus communis]
          Length = 179

 Score =  290 bits (741), Expect = 6e-76
 Identities = 139/157 (88%), Positives = 146/157 (92%)
 Frame = +3

Query: 606  ASAKQPLPTVNSVDTQSVLKRLQSELMSLMMSGDPGVSAFPEEDNIFVWKGTITGSKDTV 785
            A +KQ +PTV +VDTQSVLKRLQSELM+LMMSG+ G+SAFPEEDNIF WKGTITGSKDTV
Sbjct: 18   APSKQTVPTVKTVDTQSVLKRLQSELMALMMSGESGISAFPEEDNIFCWKGTITGSKDTV 77

Query: 786  FEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILI 965
            FEGTEYKLSLSFP DYPFKPPKVKFET CFHPNVD+YGNICLDILQDKWSSAYDVRTILI
Sbjct: 78   FEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICLDILQDKWSSAYDVRTILI 137

Query: 966  SIQSLLGEPNTSSPLNNQAAALWENQEEYRKMVEKLY 1076
            SIQSLLGEPN SSPLN QAA LW NQEEYRKMVEKLY
Sbjct: 138  SIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 174


>ref|XP_004140207.1| PREDICTED: ubiquitin-conjugating enzyme E2 19-like [Cucumis sativus]
            gi|449482542|ref|XP_004156314.1| PREDICTED:
            ubiquitin-conjugating enzyme E2 19-like [Cucumis sativus]
          Length = 181

 Score =  284 bits (727), Expect = 2e-74
 Identities = 135/158 (85%), Positives = 144/158 (91%)
 Frame = +3

Query: 603  VASAKQPLPTVNSVDTQSVLKRLQSELMSLMMSGDPGVSAFPEEDNIFVWKGTITGSKDT 782
            V+ AKQ LP   + D+QSVLKRLQSELM+LMMSGD G+SAFPEEDNIF WKGTITGSK+T
Sbjct: 18   VSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKET 77

Query: 783  VFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTIL 962
            VFEGTEY+LS SFP DYPFKPPKVKFETGCFHPNVD+YGNICLDILQDKWSSAYDVRTIL
Sbjct: 78   VFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTIL 137

Query: 963  ISIQSLLGEPNTSSPLNNQAAALWENQEEYRKMVEKLY 1076
            +SIQSLLGEPN SSPLN QAA LW NQEEYRKMVEKLY
Sbjct: 138  LSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 175


>ref|NP_001238641.1| uncharacterized protein LOC100527864 [Glycine max]
            gi|255633400|gb|ACU17057.1| unknown [Glycine max]
          Length = 180

 Score =  283 bits (725), Expect = 4e-74
 Identities = 136/173 (78%), Positives = 148/173 (85%)
 Frame = +3

Query: 567  LYNHNNNRQMNNVASAKQPLPTVNSVDTQSVLKRLQSELMSLMMSGDPGVSAFPEEDNIF 746
            ++ +  + Q N    AKQPL    +VD+QSVLKRLQSELM+LMMSGD G+SAFPEEDNIF
Sbjct: 7    IHGNTESAQSNIAPPAKQPLHPAKAVDSQSVLKRLQSELMALMMSGDSGISAFPEEDNIF 66

Query: 747  VWKGTITGSKDTVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDIYGNICLDILQD 926
             WKGTITGSKDTVFEGTEYKLSLSFP DYPFKPPKVKFET CFHPN D++GNICLDILQD
Sbjct: 67   FWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETTCFHPNFDVHGNICLDILQD 126

Query: 927  KWSSAYDVRTILISIQSLLGEPNTSSPLNNQAAALWENQEEYRKMVEKLYNHA 1085
            KWSSAYDVRTIL+SIQSLLGEPN SSPLN Q A LW NQEEYRKMVE+LY  A
Sbjct: 127  KWSSAYDVRTILLSIQSLLGEPNISSPLNQQVAQLWSNQEEYRKMVERLYKSA 179


>ref|XP_002314089.1| predicted protein [Populus trichocarpa] gi|118482900|gb|ABK93364.1|
            unknown [Populus trichocarpa] gi|222850497|gb|EEE88044.1|
            predicted protein [Populus trichocarpa]
          Length = 179

 Score =  282 bits (721), Expect = 1e-73
 Identities = 134/155 (86%), Positives = 143/155 (92%)
 Frame = +3

Query: 612  AKQPLPTVNSVDTQSVLKRLQSELMSLMMSGDPGVSAFPEEDNIFVWKGTITGSKDTVFE 791
            +KQ +P+  +VDTQSVLKRLQSELM+LMMSG+ G+SAFPE DNIF WKGTITGSKDTVFE
Sbjct: 19   SKQTVPSAKTVDTQSVLKRLQSELMALMMSGESGISAFPEGDNIFCWKGTITGSKDTVFE 78

Query: 792  GTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDIYGNICLDILQDKWSSAYDVRTILISI 971
            GTEYKLSLSFP DYPFKPPKVKFET CFHPNVD+YGNICLDILQDKWSSAYDVRTIL+SI
Sbjct: 79   GTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSI 138

Query: 972  QSLLGEPNTSSPLNNQAAALWENQEEYRKMVEKLY 1076
            QSLLGEPN SSPLN QAA LW NQEEYRKMVEKLY
Sbjct: 139  QSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 173


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