BLASTX nr result

ID: Bupleurum21_contig00005849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005849
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ84544.1| unknown [Medicago truncatula]                          485   e-165
ref|XP_003619878.1| Dihydropyrimidine dehydrogenase [Medicago tr...   484   e-165
ref|XP_002283095.1| PREDICTED: NAD-dependent dihydropyrimidine d...   479   e-165
emb|CAN75682.1| hypothetical protein VITISV_038955 [Vitis vinifera]   479   e-165
ref|XP_003528976.1| PREDICTED: NAD-dependent dihydropyrimidine d...   479   e-164

>gb|ACJ84544.1| unknown [Medicago truncatula]
          Length = 424

 Score =  485 bits (1248), Expect(2) = e-165
 Identities = 237/259 (91%), Positives = 248/259 (95%)
 Frame = +1

Query: 1   PDLSVNVNGLNMPNPFVIGSGPPGTNYKVMKKAFDEGWGAVIAKTVSLDAAKVVNVTPRY 180
           PDLSV VNGL+MPNPFVIGSGPPGTNY VMK+AFDEGWG VIAKTVSLDAAKV+NVTPRY
Sbjct: 47  PDLSVKVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAAKVINVTPRY 106

Query: 181 ARLRADANGSGLGQIIGWQNIELISDRPLETMLQEFKQLKKEYPDRILIASIMEECNKAS 360
           ARLRA+ANGS  G+IIGWQNIELISDRPLETML+EFKQLK+EYPDRILIASIMEE NKA+
Sbjct: 107 ARLRANANGSAKGEIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAA 166

Query: 361 WEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCELLGEVCGWINAKATVPVWAK 540
           WEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDC LL EVCGWINAKATVPVWAK
Sbjct: 167 WEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAK 226

Query: 541 MTPNITDITQPARVALESGCEGIAAINTIMSVMGINLNTLHPEPCVEGYSTPGGYSAKAV 720
           MTPNITDI+QPARVAL SGCEGIAAINTIMSVMGINLNTL PEPCVEGYSTPGGYSAKAV
Sbjct: 227 MTPNITDISQPARVALSSGCEGIAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAV 286

Query: 721 HPIALAKVMSIAQMMKSDF 777
           HPIAL KVMSIA+MMKS+F
Sbjct: 287 HPIALGKVMSIAKMMKSEF 305



 Score =  124 bits (311), Expect(2) = e-165
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +2

Query: 884  DYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMVHGYGLVEKLCTELKDFMKKHNFSSI 1063
            +YSLSAIGGVETGGDAAEFILLGANTVQVCTGVM+HGYGLV+KL  ELKDFMKKHNF+SI
Sbjct: 309  NYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLSLELKDFMKKHNFTSI 368

Query: 1064 EEFRGMSL 1087
            E+FRG SL
Sbjct: 369  EDFRGASL 376


>ref|XP_003619878.1| Dihydropyrimidine dehydrogenase [Medicago truncatula]
           gi|355494893|gb|AES76096.1| Dihydropyrimidine
           dehydrogenase [Medicago truncatula]
          Length = 424

 Score =  484 bits (1247), Expect(2) = e-165
 Identities = 236/259 (91%), Positives = 248/259 (95%)
 Frame = +1

Query: 1   PDLSVNVNGLNMPNPFVIGSGPPGTNYKVMKKAFDEGWGAVIAKTVSLDAAKVVNVTPRY 180
           PDLSV VNGL+MPNPFVIGSGPPGTNY VMK+AFDEGWG VIAKTVSLDAAKV+NVTPRY
Sbjct: 47  PDLSVKVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAAKVINVTPRY 106

Query: 181 ARLRADANGSGLGQIIGWQNIELISDRPLETMLQEFKQLKKEYPDRILIASIMEECNKAS 360
           ARLRA+ANGS  G+IIGWQNIELISDRPLETML+EFKQLK+EYPDRILIASIMEE NKA+
Sbjct: 107 ARLRANANGSAKGEIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAA 166

Query: 361 WEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCELLGEVCGWINAKATVPVWAK 540
           WEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDC LL EVCGWINAKATVPVWAK
Sbjct: 167 WEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAK 226

Query: 541 MTPNITDITQPARVALESGCEGIAAINTIMSVMGINLNTLHPEPCVEGYSTPGGYSAKAV 720
           MTPNITDI+QPARVAL SGCEG+AAINTIMSVMGINLNTL PEPCVEGYSTPGGYSAKAV
Sbjct: 227 MTPNITDISQPARVALSSGCEGVAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAV 286

Query: 721 HPIALAKVMSIAQMMKSDF 777
           HPIAL KVMSIA+MMKS+F
Sbjct: 287 HPIALGKVMSIAKMMKSEF 305



 Score =  124 bits (311), Expect(2) = e-165
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = +2

Query: 884  DYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMVHGYGLVEKLCTELKDFMKKHNFSSI 1063
            +YSLSAIGGVETGGDAAEFILLGANTVQVCTGVM+HGYGLV+KL  ELKDFMKKHNF+SI
Sbjct: 309  NYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLSLELKDFMKKHNFTSI 368

Query: 1064 EEFRGMSL 1087
            E+FRG SL
Sbjct: 369  EDFRGASL 376


>ref|XP_002283095.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
           PreA [Vitis vinifera]
          Length = 421

 Score =  479 bits (1234), Expect(2) = e-165
 Identities = 232/261 (88%), Positives = 247/261 (94%)
 Frame = +1

Query: 1   PDLSVNVNGLNMPNPFVIGSGPPGTNYKVMKKAFDEGWGAVIAKTVSLDAAKVVNVTPRY 180
           PDLSV VNGL+MPNPFVIGSGPPGTNY VMK+AFDEGWGAVIAKTVSLDAAKV+NVTPRY
Sbjct: 45  PDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRY 104

Query: 181 ARLRADANGSGLGQIIGWQNIELISDRPLETMLQEFKQLKKEYPDRILIASIMEECNKAS 360
           ARLR  ANGS  GQIIGW+NIELISDRPLETML+EFKQLK+EYPDRILIASIMEE +KA+
Sbjct: 105 ARLRVGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYDKAA 164

Query: 361 WEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCELLGEVCGWINAKATVPVWAK 540
           WEELIDRVEQTGIDA+EINFSCPHGMPERKMGAAVGQDC LL EVCGWINAKATVPVWAK
Sbjct: 165 WEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAK 224

Query: 541 MTPNITDITQPARVALESGCEGIAAINTIMSVMGINLNTLHPEPCVEGYSTPGGYSAKAV 720
           MTPNITDITQPARVAL SGCEG++AINTIMSVMGINLNTL PEPCVEGYSTPGGYS KAV
Sbjct: 225 MTPNITDITQPARVALSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSCKAV 284

Query: 721 HPIALAKVMSIAQMMKSDFAD 783
           HPIAL KVMSIA+MMK++F +
Sbjct: 285 HPIALGKVMSIAKMMKAEFGE 305



 Score =  128 bits (321), Expect(2) = e-165
 Identities = 61/68 (89%), Positives = 65/68 (95%)
 Frame = +2

Query: 884  DYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMVHGYGLVEKLCTELKDFMKKHNFSSI 1063
            DYSLS IGGVETGGDAAEFILLGANTVQVCTGVM+HGYGLV+KLC+ELKDFMK HNFSSI
Sbjct: 306  DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCSELKDFMKMHNFSSI 365

Query: 1064 EEFRGMSL 1087
            E+FRG SL
Sbjct: 366  EDFRGASL 373


>emb|CAN75682.1| hypothetical protein VITISV_038955 [Vitis vinifera]
          Length = 401

 Score =  479 bits (1234), Expect(2) = e-165
 Identities = 232/261 (88%), Positives = 247/261 (94%)
 Frame = +1

Query: 1   PDLSVNVNGLNMPNPFVIGSGPPGTNYKVMKKAFDEGWGAVIAKTVSLDAAKVVNVTPRY 180
           PDLSV VNGL+MPNPFVIGSGPPGTNY VMK+AFDEGWGAVIAKTVSLDAAKV+NVTPRY
Sbjct: 25  PDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRY 84

Query: 181 ARLRADANGSGLGQIIGWQNIELISDRPLETMLQEFKQLKKEYPDRILIASIMEECNKAS 360
           ARLR  ANGS  GQIIGW+NIELISDRPLETML+EFKQLK+EYPDRILIASIMEE +KA+
Sbjct: 85  ARLRVGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYDKAA 144

Query: 361 WEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCELLGEVCGWINAKATVPVWAK 540
           WEELIDRVEQTGIDA+EINFSCPHGMPERKMGAAVGQDC LL EVCGWINAKATVPVWAK
Sbjct: 145 WEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAK 204

Query: 541 MTPNITDITQPARVALESGCEGIAAINTIMSVMGINLNTLHPEPCVEGYSTPGGYSAKAV 720
           MTPNITDITQPARVAL SGCEG++AINTIMSVMGINLNTL PEPCVEGYSTPGGYS KAV
Sbjct: 205 MTPNITDITQPARVALSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSCKAV 264

Query: 721 HPIALAKVMSIAQMMKSDFAD 783
           HPIAL KVMSIA+MMK++F +
Sbjct: 265 HPIALGKVMSIAKMMKAEFGE 285



 Score =  128 bits (321), Expect(2) = e-165
 Identities = 61/68 (89%), Positives = 65/68 (95%)
 Frame = +2

Query: 884  DYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMVHGYGLVEKLCTELKDFMKKHNFSSI 1063
            DYSLS IGGVETGGDAAEFILLGANTVQVCTGVM+HGYGLV+KLC+ELKDFMK HNFSSI
Sbjct: 286  DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCSELKDFMKMHNFSSI 345

Query: 1064 EEFRGMSL 1087
            E+FRG SL
Sbjct: 346  EDFRGASL 353


>ref|XP_003528976.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
           PreA-like [Glycine max]
          Length = 424

 Score =  479 bits (1232), Expect(2) = e-164
 Identities = 230/259 (88%), Positives = 246/259 (94%)
 Frame = +1

Query: 1   PDLSVNVNGLNMPNPFVIGSGPPGTNYKVMKKAFDEGWGAVIAKTVSLDAAKVVNVTPRY 180
           PDLSV VNGL MPNPFVIGSGPPGTNY VMK+AFDEGWGAVIAKTVSLDAAKV+NVTPRY
Sbjct: 47  PDLSVTVNGLRMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRY 106

Query: 181 ARLRADANGSGLGQIIGWQNIELISDRPLETMLQEFKQLKKEYPDRILIASIMEECNKAS 360
           ARLRA ANGS  G+IIGW+NIELISDRPLETML+EFKQLK+EYPDRILIASIMEE NKA+
Sbjct: 107 ARLRAGANGSAKGEIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAA 166

Query: 361 WEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCELLGEVCGWINAKATVPVWAK 540
           WEELIDRVEQTG+DA EINFSCPHGMPERKMGAAVGQDC LL EVCGWINAKAT+PVWAK
Sbjct: 167 WEELIDRVEQTGVDAFEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATIPVWAK 226

Query: 541 MTPNITDITQPARVALESGCEGIAAINTIMSVMGINLNTLHPEPCVEGYSTPGGYSAKAV 720
           MTPNITDI+QPAR+AL SGCEG++AINTIMSVMGINLNTL PEPCVEGYSTPGGYSA+AV
Sbjct: 227 MTPNITDISQPARIALSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSARAV 286

Query: 721 HPIALAKVMSIAQMMKSDF 777
           HPIAL KVMSIA+MMKS+F
Sbjct: 287 HPIALGKVMSIAKMMKSEF 305



 Score =  126 bits (316), Expect(2) = e-164
 Identities = 59/68 (86%), Positives = 67/68 (98%)
 Frame = +2

Query: 884  DYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMVHGYGLVEKLCTELKDFMKKHNFSSI 1063
            +Y+LSAIGGVETGGDAAEFILLGANTVQVCTGVM+HGYGLV+KLC EL+DFMKKHNF+SI
Sbjct: 309  NYTLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCLELQDFMKKHNFTSI 368

Query: 1064 EEFRGMSL 1087
            E+FRG+SL
Sbjct: 369  EDFRGVSL 376


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