BLASTX nr result

ID: Bupleurum21_contig00005402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005402
         (1191 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269715.1| PREDICTED: 25.3 kDa vesicle transport protei...   191   3e-84
gb|ABB29953.1| unknown [Solanum tuberosum]                            188   7e-84
gb|AEB71558.1| synaptobrevin/VAMP-like protein [Solanum chacoense]    188   7e-84
emb|CAN69529.1| hypothetical protein VITISV_027247 [Vitis vinifera]   190   9e-84
ref|XP_004141719.1| PREDICTED: 25.3 kDa vesicle transport protei...   184   3e-83

>ref|XP_002269715.1| PREDICTED: 25.3 kDa vesicle transport protein [Vitis vinifera]
           gi|297742963|emb|CBI35830.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score =  191 bits (486), Expect(2) = 3e-84
 Identities = 94/102 (92%), Positives = 98/102 (96%)
 Frame = -3

Query: 595 DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDHVSQMSSRLTS 416
           DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD VSQMSSRLTS
Sbjct: 117 DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTS 176

Query: 415 ESSKYADKAKDLNRQALIRKWAPVAVVLGIVILLFWVRKKIW 290
           ES  YADKA+DLNRQALIRKWAPVA+VLG+V LLFW+RKKIW
Sbjct: 177 ESRIYADKARDLNRQALIRKWAPVAIVLGVVFLLFWIRKKIW 218



 Score =  148 bits (373), Expect(2) = 3e-84
 Identities = 79/129 (61%), Positives = 85/129 (65%)
 Frame = -2

Query: 1052 MVKLTMIARVTDGLPLVEGLDDDRDIQNVDLYKQQVXXXXXXXXXXXXXXXXXXXXXXXX 873
            MVKLT+IARVTDGLPL EGLDD RD+++ + YKQQV                        
Sbjct: 1    MVKLTLIARVTDGLPLAEGLDDGRDLKDAEFYKQQVKALFKNLSKGQNEPSRMSIETGPY 60

Query: 872  XXXXXXXXXXXXXXXHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLANEFERVNGSQIETA 693
                           HYIIEGRVCYLTMCDRAYPKKLAFQYLEDL NEFERVNG+QIETA
Sbjct: 61   IF-------------HYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGNQIETA 107

Query: 692  ARPYAFIKF 666
            ARPYAFIKF
Sbjct: 108  ARPYAFIKF 116


>gb|ABB29953.1| unknown [Solanum tuberosum]
          Length = 218

 Score =  188 bits (478), Expect(2) = 7e-84
 Identities = 93/102 (91%), Positives = 97/102 (95%)
 Frame = -3

Query: 595 DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDHVSQMSSRLTS 416
           DTFIQKTKKLYQDTRTQRNI+KLNDELYEVHQIMTRNVQEVLGVGEKLD VSQMSSRLTS
Sbjct: 117 DTFIQKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTS 176

Query: 415 ESSKYADKAKDLNRQALIRKWAPVAVVLGIVILLFWVRKKIW 290
           ES  YADKAKDLNRQALIRKWAPVA+VLG+VIL FW+R KIW
Sbjct: 177 ESRIYADKAKDLNRQALIRKWAPVAIVLGVVILFFWLRTKIW 218



 Score =  150 bits (378), Expect(2) = 7e-84
 Identities = 80/129 (62%), Positives = 83/129 (64%)
 Frame = -2

Query: 1052 MVKLTMIARVTDGLPLVEGLDDDRDIQNVDLYKQQVXXXXXXXXXXXXXXXXXXXXXXXX 873
            MVKLT+IARVTDGLPL EGLDD RD+QN D YKQQV                        
Sbjct: 1    MVKLTLIARVTDGLPLAEGLDDGRDVQNADFYKQQVKALFKNLSMRQNDASRMSIETGPY 60

Query: 872  XXXXXXXXXXXXXXXHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLANEFERVNGSQIETA 693
                           HYIIEG VCYLTMCDR+YPKKLAFQYLEDL NEFER NGSQIETA
Sbjct: 61   VF-------------HYIIEGHVCYLTMCDRSYPKKLAFQYLEDLKNEFERANGSQIETA 107

Query: 692  ARPYAFIKF 666
            ARPYAFIKF
Sbjct: 108  ARPYAFIKF 116


>gb|AEB71558.1| synaptobrevin/VAMP-like protein [Solanum chacoense]
          Length = 218

 Score =  188 bits (478), Expect(2) = 7e-84
 Identities = 93/102 (91%), Positives = 97/102 (95%)
 Frame = -3

Query: 595 DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDHVSQMSSRLTS 416
           DTFIQKTKKLYQDTRTQRNI+KLNDELYEVHQIMTRNVQEVLGVGEKLD VSQMSSRLTS
Sbjct: 117 DTFIQKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTS 176

Query: 415 ESSKYADKAKDLNRQALIRKWAPVAVVLGIVILLFWVRKKIW 290
           ES  YADKAKDLNRQALIRKWAPVA+VLG+VIL FW+R KIW
Sbjct: 177 ESRIYADKAKDLNRQALIRKWAPVAIVLGVVILFFWLRTKIW 218



 Score =  150 bits (378), Expect(2) = 7e-84
 Identities = 80/129 (62%), Positives = 83/129 (64%)
 Frame = -2

Query: 1052 MVKLTMIARVTDGLPLVEGLDDDRDIQNVDLYKQQVXXXXXXXXXXXXXXXXXXXXXXXX 873
            MVKLT+IARVTDGLPL EGLDD RD+QN D YKQQV                        
Sbjct: 1    MVKLTLIARVTDGLPLAEGLDDGRDVQNADFYKQQVKALFKNLSMRQNDASRMSIETGPY 60

Query: 872  XXXXXXXXXXXXXXXHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLANEFERVNGSQIETA 693
                           HYIIEG VCYLTMCDR+YPKKLAFQYLEDL NEFER NGSQIETA
Sbjct: 61   IF-------------HYIIEGHVCYLTMCDRSYPKKLAFQYLEDLKNEFERANGSQIETA 107

Query: 692  ARPYAFIKF 666
            ARPYAFIKF
Sbjct: 108  ARPYAFIKF 116


>emb|CAN69529.1| hypothetical protein VITISV_027247 [Vitis vinifera]
          Length = 218

 Score =  190 bits (482), Expect(2) = 9e-84
 Identities = 93/102 (91%), Positives = 97/102 (95%)
 Frame = -3

Query: 595 DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDHVSQMSSRLTS 416
           DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD VSQMSSRLTS
Sbjct: 117 DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTS 176

Query: 415 ESSKYADKAKDLNRQALIRKWAPVAVVLGIVILLFWVRKKIW 290
           ES  YADKA+DLNRQALIRKWAPVA+V G+V LLFW+RKKIW
Sbjct: 177 ESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWIRKKIW 218



 Score =  148 bits (373), Expect(2) = 9e-84
 Identities = 79/129 (61%), Positives = 85/129 (65%)
 Frame = -2

Query: 1052 MVKLTMIARVTDGLPLVEGLDDDRDIQNVDLYKQQVXXXXXXXXXXXXXXXXXXXXXXXX 873
            MVKLT+IARVTDGLPL EGLDD RD+++ + YKQQV                        
Sbjct: 1    MVKLTLIARVTDGLPLAEGLDDGRDLKDAEFYKQQVKALFKNLSKGQNEPSRMSIETGPY 60

Query: 872  XXXXXXXXXXXXXXXHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLANEFERVNGSQIETA 693
                           HYIIEGRVCYLTMCDRAYPKKLAFQYLEDL NEFERVNG+QIETA
Sbjct: 61   IF-------------HYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGNQIETA 107

Query: 692  ARPYAFIKF 666
            ARPYAFIKF
Sbjct: 108  ARPYAFIKF 116


>ref|XP_004141719.1| PREDICTED: 25.3 kDa vesicle transport protein-like [Cucumis
           sativus]
          Length = 231

 Score =  184 bits (467), Expect(2) = 3e-83
 Identities = 90/102 (88%), Positives = 95/102 (93%)
 Frame = -3

Query: 595 DTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDHVSQMSSRLTS 416
           DT+IQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD VSQMSSRLTS
Sbjct: 130 DTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTS 189

Query: 415 ESSKYADKAKDLNRQALIRKWAPVAVVLGIVILLFWVRKKIW 290
           ES  YADKA+DLNRQALIRKWAPVA+V G+V LLFW + KIW
Sbjct: 190 ESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSKIW 231



 Score =  152 bits (383), Expect(2) = 3e-83
 Identities = 81/131 (61%), Positives = 87/131 (66%)
 Frame = -2

Query: 1058 IRMVKLTMIARVTDGLPLVEGLDDDRDIQNVDLYKQQVXXXXXXXXXXXXXXXXXXXXXX 879
            ++MVKLTMIARVTDGLPL EGLDD RD+Q+ + YKQQV                      
Sbjct: 12   LKMVKLTMIARVTDGLPLAEGLDDGRDMQDAEFYKQQVKALFKNLSRGQNEASRMSVETG 71

Query: 878  XXXXXXXXXXXXXXXXXHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLANEFERVNGSQIE 699
                             HYIIEGRVCYLTMCDRAYPKKLAFQYLEDL NEFERVNG+QIE
Sbjct: 72   PYVF-------------HYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIE 118

Query: 698  TAARPYAFIKF 666
            TAARPYAFIKF
Sbjct: 119  TAARPYAFIKF 129


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