BLASTX nr result

ID: Bupleurum21_contig00005169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005169
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ47423.1| Beta-1,2-xylosyltransferase [Solanum tuberosum]       117   8e-25
gb|AAZ68035.1| putative beta 1,2-xylosyltransferase [Nicotiana t...   115   3e-24
emb|CAF25343.1| putative beta-(1,2)-xylosyltransferase [Nicotian...   115   3e-24
emb|CAF25342.1| putative putative beta-(1,2)-xylosyltransferase ...   115   3e-24
ref|XP_002300350.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23

>emb|CAJ47423.1| Beta-1,2-xylosyltransferase [Solanum tuberosum]
          Length = 522

 Score =  117 bits (294), Expect = 8e-25
 Identities = 58/100 (58%), Positives = 69/100 (69%), Gaps = 16/100 (16%)
 Frame = -2

Query: 281 SCEAYFGNGFTRRFDLLNSS----------------SGWFRCFRSDTLMTSVCEGGMIRM 150
           SCE YFGNGFTR+ DLL +S                 GWFRCF S+TL +S+CEGG+IRM
Sbjct: 86  SCEGYFGNGFTRKIDLLKTSPEIHRKFGENRDSGGGGGWFRCFFSETLQSSICEGGVIRM 145

Query: 149 NPGKINMSSGGEALESVIGRTEEDELPVFRSGAFDILVQQ 30
           NP KI MS GGE LE VIGR EE+ELP+F +GAF+I V +
Sbjct: 146 NPEKILMSKGGEKLEKVIGRGEEEELPIFENGAFEIEVNE 185


>gb|AAZ68035.1| putative beta 1,2-xylosyltransferase [Nicotiana tabacum]
           gi|77540265|gb|ABA86987.1| putative
           beta(1,2)-xylosyltransferase [Nicotiana tabacum]
          Length = 523

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/97 (59%), Positives = 68/97 (70%), Gaps = 15/97 (15%)
 Frame = -2

Query: 281 SCEAYFGNGFTRRFDLLNSS---------------SGWFRCFRSDTLMTSVCEGGMIRMN 147
           SCE YFGNGFT + DLL +S                GWFRCF S+TL +S+CEGG IRMN
Sbjct: 88  SCEGYFGNGFTLKVDLLKTSPELHQKFGENTVSGDGGWFRCFFSETLQSSICEGGAIRMN 147

Query: 146 PGKINMSSGGEALESVIGRTEEDELPVFRSGAFDILV 36
           P +I MS GGE LESVIGR+E+DELPVF++GAF I V
Sbjct: 148 PDEILMSRGGEKLESVIGRSEDDELPVFKNGAFQIKV 184


>emb|CAF25343.1| putative beta-(1,2)-xylosyltransferase [Nicotiana tabacum]
          Length = 516

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/97 (59%), Positives = 68/97 (70%), Gaps = 15/97 (15%)
 Frame = -2

Query: 281 SCEAYFGNGFTRRFDLLNSS---------------SGWFRCFRSDTLMTSVCEGGMIRMN 147
           SCE YFGNGFT + DLL +S                GWFRCF S+TL +S+CEGG IRMN
Sbjct: 81  SCEGYFGNGFTLKVDLLKTSPEFHRKFGENTVSGDGGWFRCFFSETLQSSICEGGAIRMN 140

Query: 146 PGKINMSSGGEALESVIGRTEEDELPVFRSGAFDILV 36
           P +I MS GGE LESVIGR+E+DELPVF++GAF I V
Sbjct: 141 PDEILMSRGGEKLESVIGRSEDDELPVFKNGAFQIKV 177


>emb|CAF25342.1| putative putative beta-(1,2)-xylosyltransferase [Nicotiana tabacum]
          Length = 523

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/97 (59%), Positives = 68/97 (70%), Gaps = 15/97 (15%)
 Frame = -2

Query: 281 SCEAYFGNGFTRRFDLLNSS---------------SGWFRCFRSDTLMTSVCEGGMIRMN 147
           SCE YFGNGFT + DLL +S                GWFRCF S+TL +S+CEGG IRMN
Sbjct: 88  SCEGYFGNGFTLKVDLLKTSPELHQKFGENTVSGDGGWFRCFFSETLQSSICEGGAIRMN 147

Query: 146 PGKINMSSGGEALESVIGRTEEDELPVFRSGAFDILV 36
           P +I MS GGE LESVIGR+E+DELPVF++GAF I V
Sbjct: 148 PDEILMSRGGEKLESVIGRSEDDELPVFKNGAFQIKV 184


>ref|XP_002300350.1| predicted protein [Populus trichocarpa] gi|222847608|gb|EEE85155.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  113 bits (283), Expect = 1e-23
 Identities = 54/88 (61%), Positives = 67/88 (76%)
 Frame = -2

Query: 281 SCEAYFGNGFTRRFDLLNSSSGWFRCFRSDTLMTSVCEGGMIRMNPGKINMSSGGEALES 102
           SCEAYFGNGF RR D+L  S GWFRC  S+TL +S+CEGG +RM P +I MS GGE +E 
Sbjct: 89  SCEAYFGNGFGRRIDVL-LSGGWFRCLYSETLRSSICEGGSVRMVPERIKMSRGGERIEE 147

Query: 101 VIGRTEEDELPVFRSGAFDILVQQSRRR 18
           VIGR+EE+ELP F +GAF+IL   +R +
Sbjct: 148 VIGRSEEEELPDFENGAFEILGSTARSK 175


Top