BLASTX nr result

ID: Bupleurum21_contig00004989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004989
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310260.1| predicted protein [Populus trichocarpa] gi|2...   435   e-120
ref|XP_003629403.1| Tm-1^GCR26 protein [Medicago truncatula] gi|...   427   e-117
emb|CBI17463.3| unnamed protein product [Vitis vinifera]              427   e-117
gb|AFK35337.1| unknown [Medicago truncatula]                          424   e-116
ref|XP_002865070.1| hypothetical protein ARALYDRAFT_496963 [Arab...   421   e-115

>ref|XP_002310260.1| predicted protein [Populus trichocarpa] gi|222853163|gb|EEE90710.1|
            predicted protein [Populus trichocarpa]
          Length = 655

 Score =  435 bits (1119), Expect = e-120
 Identities = 223/290 (76%), Positives = 243/290 (83%)
 Frame = -1

Query: 999  ISYSLSDYPDAKPETLQRKQTILQQLNNQXXXXXXXXXXXXXXXXXXKFEEAGGVDLIVV 820
            I YS S+YPDA+PETLQ+ Q ILQ L +Q                  KFEEAGGVDLIV+
Sbjct: 366  ICYSPSNYPDARPETLQKTQAILQHLKDQIDKGFPIIGAGAGTGISAKFEEAGGVDLIVL 425

Query: 819  YNSGRFRMAGRGSLAGLLPFADANAVVLDMANXXXXXXXXXXXLAGVCGTDPFRRMDYFL 640
            YNSGRFRMAGRGSLAGLLPFADANA+V+DMAN           LAGVCGTDPFRRMDYFL
Sbjct: 426  YNSGRFRMAGRGSLAGLLPFADANAIVIDMANEVLPVVKEVPVLAGVCGTDPFRRMDYFL 485

Query: 639  KQLESIGFSGVQNFPTVGLFDGNFRQNLEETGMGYGLEVEMIGKAHKMGFLTTPYAFNQV 460
            KQ+ESIGF GVQNFPTVGLFDGNFRQNLEETGMGYGLEV+MI KAHKMG LTTPYAFN+ 
Sbjct: 486  KQVESIGFCGVQNFPTVGLFDGNFRQNLEETGMGYGLEVQMIEKAHKMGLLTTPYAFNES 545

Query: 459  ESDAMAKAGADIIVAHMGLTTAGSIGAKTAVSLDESVSRVQAIADAAHRINPDTIVLCHG 280
            E+  MAK GADIIVAHMGLTT+GSIGAKTAVSLDESV +VQAIADAAH+INP+ IVLCHG
Sbjct: 546  EAREMAKVGADIIVAHMGLTTSGSIGAKTAVSLDESVFQVQAIADAAHKINPNVIVLCHG 605

Query: 279  GPISGPKEAEFILKRTDGVHGFYGASSLERLPVEQAIKTTVQQYKAISIK 130
            GPISGPKEAEFIL RT GVHGFYGASS+ERLPVEQAI +T++QYK+ISIK
Sbjct: 606  GPISGPKEAEFILNRTKGVHGFYGASSMERLPVEQAITSTMKQYKSISIK 655


>ref|XP_003629403.1| Tm-1^GCR26 protein [Medicago truncatula] gi|355523425|gb|AET03879.1|
            Tm-1^GCR26 protein [Medicago truncatula]
          Length = 753

 Score =  427 bits (1099), Expect = e-117
 Identities = 222/291 (76%), Positives = 240/291 (82%)
 Frame = -1

Query: 1005 GNISYSLSDYPDAKPETLQRKQTILQQLNNQXXXXXXXXXXXXXXXXXXKFEEAGGVDLI 826
            G I Y+ S++PDAKPETL++ Q ILQQ  +Q                  KFEEAGGVDLI
Sbjct: 462  GTIVYAPSEFPDAKPETLEKTQLILQQFKDQIDKGIPIIGAGAGTGISAKFEEAGGVDLI 521

Query: 825  VVYNSGRFRMAGRGSLAGLLPFADANAVVLDMANXXXXXXXXXXXLAGVCGTDPFRRMDY 646
            V+YNSGRFRMAGRGSLAGLLPFADANAVVLDMAN           LAGVC TDPFRRMD+
Sbjct: 522  VLYNSGRFRMAGRGSLAGLLPFADANAVVLDMANEVLPVVKKVPVLAGVCATDPFRRMDH 581

Query: 645  FLKQLESIGFSGVQNFPTVGLFDGNFRQNLEETGMGYGLEVEMIGKAHKMGFLTTPYAFN 466
            FLKQ+ES GFSGVQNFPTVGL+DGNFRQNLEETGMGY LEVEMI KAHKMG LTTPYAFN
Sbjct: 582  FLKQVESTGFSGVQNFPTVGLYDGNFRQNLEETGMGYSLEVEMIQKAHKMGLLTTPYAFN 641

Query: 465  QVESDAMAKAGADIIVAHMGLTTAGSIGAKTAVSLDESVSRVQAIADAAHRINPDTIVLC 286
            Q E+  MAK GADIIVAHMGLTT GSIGAKTAVSL+ESV  VQAIADAAHRINP+ IVLC
Sbjct: 642  QHEAIEMAKVGADIIVAHMGLTTTGSIGAKTAVSLEESVVLVQAIADAAHRINPNAIVLC 701

Query: 285  HGGPISGPKEAEFILKRTDGVHGFYGASSLERLPVEQAIKTTVQQYKAISI 133
            HGGPISGP+EAEFILKRT GVHGFYGASS+ERLPVEQAI +TV+QYK+ISI
Sbjct: 702  HGGPISGPEEAEFILKRTKGVHGFYGASSMERLPVEQAITSTVKQYKSISI 752


>emb|CBI17463.3| unnamed protein product [Vitis vinifera]
          Length = 756

 Score =  427 bits (1097), Expect = e-117
 Identities = 218/297 (73%), Positives = 245/297 (82%)
 Frame = -1

Query: 1020 NIQDRGNISYSLSDYPDAKPETLQRKQTILQQLNNQXXXXXXXXXXXXXXXXXXKFEEAG 841
            N+     I YS SD+PDA+PETLQR ++I+Q+L +Q                  KFEEAG
Sbjct: 460  NLLGNETICYSPSDFPDARPETLQRTRSIIQRLKDQISKGKPIIGAGAGTGISAKFEEAG 519

Query: 840  GVDLIVVYNSGRFRMAGRGSLAGLLPFADANAVVLDMANXXXXXXXXXXXLAGVCGTDPF 661
            GVDLI++YNSGRFRMAGRGSLAGLLPFADANAVV+DMA+           LAGVCGTDPF
Sbjct: 520  GVDLIIIYNSGRFRMAGRGSLAGLLPFADANAVVVDMASEVLPVVKEVPVLAGVCGTDPF 579

Query: 660  RRMDYFLKQLESIGFSGVQNFPTVGLFDGNFRQNLEETGMGYGLEVEMIGKAHKMGFLTT 481
            RRMD FLKQLE IGF GVQNFPTVGL DGNFRQNLEETGMGYGLEV+MIGKAHKMG LTT
Sbjct: 580  RRMDSFLKQLELIGFVGVQNFPTVGLIDGNFRQNLEETGMGYGLEVQMIGKAHKMGLLTT 639

Query: 480  PYAFNQVESDAMAKAGADIIVAHMGLTTAGSIGAKTAVSLDESVSRVQAIADAAHRINPD 301
            PYAFN+ E+  MAKAGADIIVAHMGLTT+GSIGAKT+VS+++SV RVQAIADAAH INP+
Sbjct: 640  PYAFNRDEAVGMAKAGADIIVAHMGLTTSGSIGAKTSVSIEDSVVRVQAIADAAHSINPE 699

Query: 300  TIVLCHGGPISGPKEAEFILKRTDGVHGFYGASSLERLPVEQAIKTTVQQYKAISIK 130
             IVLCHGGPISGP+EAEF+LKRT GVHGFYGASS+ERLPVE+AI +TVQQYK+I IK
Sbjct: 700  VIVLCHGGPISGPQEAEFVLKRTKGVHGFYGASSMERLPVERAITSTVQQYKSIRIK 756


>gb|AFK35337.1| unknown [Medicago truncatula]
          Length = 655

 Score =  424 bits (1091), Expect = e-116
 Identities = 221/291 (75%), Positives = 239/291 (82%)
 Frame = -1

Query: 1005 GNISYSLSDYPDAKPETLQRKQTILQQLNNQXXXXXXXXXXXXXXXXXXKFEEAGGVDLI 826
            G I Y+ S++PDAKPETL++ Q ILQQ  +Q                  KFEEAGGVDLI
Sbjct: 364  GTIVYAPSEFPDAKPETLEKTQLILQQFKDQIDKGIPIIGAGAGTGISAKFEEAGGVDLI 423

Query: 825  VVYNSGRFRMAGRGSLAGLLPFADANAVVLDMANXXXXXXXXXXXLAGVCGTDPFRRMDY 646
            V+YNSGRFRMAGRGSLAGLLP ADANAVVLDMAN           LAGVC TDPFRRMD+
Sbjct: 424  VLYNSGRFRMAGRGSLAGLLPSADANAVVLDMANEVLPVVKKVPVLAGVCATDPFRRMDH 483

Query: 645  FLKQLESIGFSGVQNFPTVGLFDGNFRQNLEETGMGYGLEVEMIGKAHKMGFLTTPYAFN 466
            FLKQ+ES GFSGVQNFPTVGL+DGNFRQNLEETGMGY LEVEMI KAHKMG LTTPYAFN
Sbjct: 484  FLKQVESTGFSGVQNFPTVGLYDGNFRQNLEETGMGYSLEVEMIQKAHKMGLLTTPYAFN 543

Query: 465  QVESDAMAKAGADIIVAHMGLTTAGSIGAKTAVSLDESVSRVQAIADAAHRINPDTIVLC 286
            Q E+  MAK GADIIVAHMGLTT GSIGAKTAVSL+ESV  VQAIADAAHRINP+ IVLC
Sbjct: 544  QHEAIEMAKVGADIIVAHMGLTTTGSIGAKTAVSLEESVVLVQAIADAAHRINPNAIVLC 603

Query: 285  HGGPISGPKEAEFILKRTDGVHGFYGASSLERLPVEQAIKTTVQQYKAISI 133
            HGGPISGP+EAEFILKRT GVHGFYGASS+ERLPVEQAI +TV+QYK+ISI
Sbjct: 604  HGGPISGPEEAEFILKRTKGVHGFYGASSMERLPVEQAITSTVKQYKSISI 654


>ref|XP_002865070.1| hypothetical protein ARALYDRAFT_496963 [Arabidopsis lyrata subsp.
            lyrata] gi|297310905|gb|EFH41329.1| hypothetical protein
            ARALYDRAFT_496963 [Arabidopsis lyrata subsp. lyrata]
          Length = 757

 Score =  421 bits (1082), Expect = e-115
 Identities = 218/291 (74%), Positives = 241/291 (82%), Gaps = 1/291 (0%)
 Frame = -1

Query: 999  ISYSLSDYPDAKPETLQRKQTILQQLNNQXXXXXXXXXXXXXXXXXXKFEEAGGVDLIVV 820
            I YS +D+P+AKPETL+R QTIL +L +Q                  KFEEAGG+DLIV+
Sbjct: 467  IPYSPTDFPNAKPETLERTQTILGRLRDQIEKGIPIIGGGAGTGISAKFEEAGGIDLIVI 526

Query: 819  YNSGRFRMAGRGSLAGLLPFADANAVVLDMANXXXXXXXXXXXLAGVCGTDPFRRMDYFL 640
            YNSGRFRMAGRGSLAGLLPFADANAVVL+MAN           LAGVC TDPFRRMDYFL
Sbjct: 527  YNSGRFRMAGRGSLAGLLPFADANAVVLEMANEVLPVVKAVPVLAGVCATDPFRRMDYFL 586

Query: 639  KQLESIGFSGVQNFPTVGLFDGNFRQNLEETGMGYGLEVEMIGKAHKMGFLTTPYAFNQV 460
            KQLESIGF GVQNFPTVGLFDGNFRQNLEETGMGY LEV+MI +AHKMG LTTPYAFN  
Sbjct: 587  KQLESIGFVGVQNFPTVGLFDGNFRQNLEETGMGYDLEVKMISEAHKMGLLTTPYAFNPK 646

Query: 459  ESDAMAKAGADIIVAHMGLTTAGSIGAKTAVSLDESVSRVQAIADAAHRINPDTIVLCHG 280
            E + MAKAGADIIVAHMGLTT+G+IGAKTAVS++ESV RVQAIADAA R NPD IVLCHG
Sbjct: 647  EGEEMAKAGADIIVAHMGLTTSGNIGAKTAVSVEESVVRVQAIADAARRFNPDIIVLCHG 706

Query: 279  GPISGPKEAEFILKRTDG-VHGFYGASSLERLPVEQAIKTTVQQYKAISIK 130
            GPISGP+EAEF+LKRT G VHGFYGASS+ERLPVEQAI +TVQ+YK+I+IK
Sbjct: 707  GPISGPEEAEFVLKRTQGCVHGFYGASSMERLPVEQAITSTVQKYKSIAIK 757


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