BLASTX nr result

ID: Bupleurum21_contig00004985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004985
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270196.1| PREDICTED: protein SENSITIVE TO PROTON RHIZO...   102   3e-20
ref|XP_002327330.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
gb|ADL36633.1| C2H2L domain class transcription factor [Malus x ...    84   2e-14
ref|XP_002526844.1| hypothetical protein RCOM_0686820 [Ricinus c...    77   2e-12
ref|XP_004139705.1| PREDICTED: protein SENSITIVE TO PROTON RHIZO...    76   3e-12

>ref|XP_002270196.1| PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 isoform 1
           [Vitis vinifera] gi|359493099|ref|XP_003634509.1|
           PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1
           isoform 2 [Vitis vinifera]
           gi|359493101|ref|XP_003634510.1| PREDICTED: protein
           SENSITIVE TO PROTON RHIZOTOXICITY 1 isoform 3 [Vitis
           vinifera] gi|147859485|emb|CAN81435.1| hypothetical
           protein VITISV_010700 [Vitis vinifera]
          Length = 527

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
 Frame = -3

Query: 341 ETWTKLPSSTQLELRKKVPPDQQSFNNFN--SQESMQKWDDPSIIDYSTRIEEQYPEFSQ 168
           +TWT+  SS       ++P DQQSF NF+   Q+   KW+DPS++DYS RIE  + EF+Q
Sbjct: 10  DTWTQSSSSGN-----ELPKDQQSFTNFSLQQQQHQHKWEDPSVLDYSVRIEPAFQEFNQ 64

Query: 167 APRIPCTFTCNNDDQMKILGQLDGQMNGIRDAIRNCEWDPRVMLTNLSIMEDKIH 3
                 +  CN + Q+K L + D QMN + +  R  +WDPRVML+NLS +E KIH
Sbjct: 65  TSATSSSLPCNPNSQIKNLNREDCQMNEMLEPNRIQDWDPRVMLSNLSFLEQKIH 119


>ref|XP_002327330.1| predicted protein [Populus trichocarpa] gi|222835700|gb|EEE74135.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/113 (44%), Positives = 66/113 (58%)
 Frame = -3

Query: 341 ETWTKLPSSTQLELRKKVPPDQQSFNNFNSQESMQKWDDPSIIDYSTRIEEQYPEFSQAP 162
           + W   PSS+   L +K+  +  SF NFN Q+  QKWDD SI+DY  RIE  + EF+QA 
Sbjct: 10  DAWAN-PSSSSNGLPRKMALENPSFTNFNLQQQEQKWDDTSILDYGIRIEPPFREFNQAS 68

Query: 161 RIPCTFTCNNDDQMKILGQLDGQMNGIRDAIRNCEWDPRVMLTNLSIMEDKIH 3
                 + N ++Q K+L Q DGQ N      +  +WDPR ML NLS +E KIH
Sbjct: 69  ESEYLLSSNCNNQPKVLDQEDGQNNEALQTSKLQDWDPRSMLNNLSFLEQKIH 121


>gb|ADL36633.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 527

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/113 (34%), Positives = 65/113 (57%)
 Frame = -3

Query: 341 ETWTKLPSSTQLELRKKVPPDQQSFNNFNSQESMQKWDDPSIIDYSTRIEEQYPEFSQAP 162
           +TW     ST  ++   +  D  SF NFNSQ+  ++W+ PS++DY  R+E  + +F Q  
Sbjct: 9   DTWEN--PSTGNDVTNTISSDHPSFTNFNSQQHQREWERPSVLDYEMRMEPSFLKFHQPS 66

Query: 161 RIPCTFTCNNDDQMKILGQLDGQMNGIRDAIRNCEWDPRVMLTNLSIMEDKIH 3
               ++TCN+ +  KI  Q  G+M+ ++   +  +WD R+ L NL+ +E KIH
Sbjct: 67  DSQTSYTCNSKNDTKIPDQEGGKMHEVQQPNKIQDWDARMTLNNLTFLEQKIH 119


>ref|XP_002526844.1| hypothetical protein RCOM_0686820 [Ricinus communis]
           gi|223533848|gb|EEF35579.1| hypothetical protein
           RCOM_0686820 [Ricinus communis]
          Length = 357

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/113 (36%), Positives = 62/113 (54%)
 Frame = -3

Query: 341 ETWTKLPSSTQLELRKKVPPDQQSFNNFNSQESMQKWDDPSIIDYSTRIEEQYPEFSQAP 162
           ETW    SS+   L + +  ++ SF NF+SQ+  QKW+D +I  Y  R +  + EF+   
Sbjct: 10  ETWAN-SSSSGSGLPEHLSTEKPSFANFSSQQDQQKWEDTAI--YGIRTDPPFQEFNLPS 66

Query: 161 RIPCTFTCNNDDQMKILGQLDGQMNGIRDAIRNCEWDPRVMLTNLSIMEDKIH 3
                   N DDQ+KI+ + D  +N      +  +WDP+ ML+NLS +E KIH
Sbjct: 67  ETQTLLPSNPDDQIKIMDEEDSHINEALQINKIPDWDPKAMLSNLSFLEQKIH 119


>ref|XP_004139705.1| PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like
           [Cucumis sativus] gi|449516603|ref|XP_004165336.1|
           PREDICTED: LOW QUALITY PROTEIN: protein SENSITIVE TO
           PROTON RHIZOTOXICITY 1-like [Cucumis sativus]
          Length = 512

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/90 (42%), Positives = 54/90 (60%)
 Frame = -3

Query: 272 SFNNFNSQESMQKWDDPSIIDYSTRIEEQYPEFSQAPRIPCTFTCNNDDQMKILGQLDGQ 93
           SF N N Q+  QKW D SI+DY+  +++ + EF +      + TCN + Q++IL +   Q
Sbjct: 18  SFPNGNVQQPPQKWPDTSILDYA--MDQPFQEFQEQTESKASLTCNPNQQIEILDKDSNQ 75

Query: 92  MNGIRDAIRNCEWDPRVMLTNLSIMEDKIH 3
           MN    A +  +WDPR ML NLS +E KIH
Sbjct: 76  MNAALLASKIQDWDPRAMLNNLSFLEQKIH 105


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