BLASTX nr result

ID: Bupleurum21_contig00004973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004973
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arab...   402   e-110
gb|AFK39131.1| unknown [Lotus japonicus]                              402   e-110
ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana] g...   400   e-109
emb|CBI38885.3| unnamed protein product [Vitis vinifera]              399   e-109
ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vin...   399   e-109

>ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arabidopsis lyrata subsp.
           lyrata] gi|297327840|gb|EFH58260.1| hypothetical protein
           ARALYDRAFT_903960 [Arabidopsis lyrata subsp. lyrata]
          Length = 239

 Score =  402 bits (1034), Expect = e-110
 Identities = 202/233 (86%), Positives = 223/233 (95%), Gaps = 2/233 (0%)
 Frame = -2

Query: 796 DLQESGWEELRKEARKIEGDLDVKLSSYAKLGARYTQSGYVDAASPTAGSGRSWKSTEME 617
           DLQESGWEELR+EARKIEGDLDVKLSSYAKLGAR+TQ GYVDA SPT GSGRSWKS EME
Sbjct: 7   DLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDAGSPTVGSGRSWKSMEME 66

Query: 616 IQSLLEKLLDVNDSMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMKEHA 437
           IQSLLEKLLD+NDSMSRCAASAAPTTSVTQKLARHRDILHE+TQEFRRIKGNINSM+EHA
Sbjct: 67  IQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSMREHA 126

Query: 436 ELLTSVREDISEYKASG--SPRMQLLRERAAIHGNISHMDEVISQAQATRAVLGSQRAMF 263
           ELL+SVR+DISEYKASG  SP +Q+LRERA+IHG+ISH+D+VI QAQATRAVLGSQR++F
Sbjct: 127 ELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQRSLF 186

Query: 262 GDVQGKVKLLGEKFPIVRGLIGSIRRKRSRDTLILAAVIAACTLFLIIYWLSK 104
            DVQGKVK LG+KFP++RGL+GSI+RKRSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 187 SDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>gb|AFK39131.1| unknown [Lotus japonicus]
          Length = 239

 Score =  402 bits (1032), Expect = e-110
 Identities = 203/233 (87%), Positives = 220/233 (94%), Gaps = 2/233 (0%)
 Frame = -2

Query: 796 DLQESGWEELRKEARKIEGDLDVKLSSYAKLGARYTQSGYVDAASPTAGSGRSWKSTEME 617
           +LQESGWEELRKEARKIEGDLDVKLSSYAKLGAR+TQ GYVD  SP  GS RSWKS EME
Sbjct: 7   ELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKSMEME 66

Query: 616 IQSLLEKLLDVNDSMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMKEHA 437
           IQSLLEKLLD+NDSMSRCAASA P TSVTQKLARHRDILHEFTQEFRRIKGNINSM+EHA
Sbjct: 67  IQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHA 126

Query: 436 ELLTSVREDISEYKASG--SPRMQLLRERAAIHGNISHMDEVISQAQATRAVLGSQRAMF 263
           ELLTSVR+DIS++K SG  SPRMQLLRERAAIHG+ISH+D+VISQAQATR+VLGSQRA+F
Sbjct: 127 ELLTSVRDDISDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQRALF 186

Query: 262 GDVQGKVKLLGEKFPIVRGLIGSIRRKRSRDTLILAAVIAACTLFLIIYWLSK 104
           GDVQGKVK+LG+KFPI+R L+GSIRRKRSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 187 GDVQGKVKVLGDKFPIIRSLLGSIRRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana]
           gi|13898895|gb|AAK48905.1|AF357529_1 Golgi SNARE 12
           protein [Arabidopsis thaliana] gi|2583133|gb|AAB82642.1|
           putative cis-Golgi SNARE protein [Arabidopsis thaliana]
           gi|88196757|gb|ABD43021.1| At2g45200 [Arabidopsis
           thaliana] gi|330255430|gb|AEC10524.1| Golgi SNARE 12
           protein [Arabidopsis thaliana]
          Length = 239

 Score =  400 bits (1027), Expect = e-109
 Identities = 200/233 (85%), Positives = 222/233 (95%), Gaps = 2/233 (0%)
 Frame = -2

Query: 796 DLQESGWEELRKEARKIEGDLDVKLSSYAKLGARYTQSGYVDAASPTAGSGRSWKSTEME 617
           DLQESGWEELR+EARKIEGDLDVKLSSYAKLGAR+TQ GYVD  SPT GSGRSWKS EME
Sbjct: 7   DLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKSMEME 66

Query: 616 IQSLLEKLLDVNDSMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMKEHA 437
           IQSLLEKLLD+NDSMSRCAASAAPTTSVTQKLARHRDILHE+TQEFRRIKGNINS++EHA
Sbjct: 67  IQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSLREHA 126

Query: 436 ELLTSVREDISEYKASG--SPRMQLLRERAAIHGNISHMDEVISQAQATRAVLGSQRAMF 263
           ELL+SVR+DISEYKASG  SP +Q+LRERA+IHG+ISH+D+VI QAQATRAVLGSQR++F
Sbjct: 127 ELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQRSLF 186

Query: 262 GDVQGKVKLLGEKFPIVRGLIGSIRRKRSRDTLILAAVIAACTLFLIIYWLSK 104
            DVQGKVK LG+KFP++RGL+GSI+RKRSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 187 SDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>emb|CBI38885.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  399 bits (1024), Expect = e-109
 Identities = 202/233 (86%), Positives = 217/233 (93%), Gaps = 2/233 (0%)
 Frame = -2

Query: 796 DLQESGWEELRKEARKIEGDLDVKLSSYAKLGARYTQSGYVDAASPTAGSGRSWKSTEME 617
           DLQESGWEELRKEARKIEGDLDVKLSSYAKLGAR+TQ GYVD  SPT  S RSWKS EME
Sbjct: 6   DLQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVSSSRSWKSMEME 65

Query: 616 IQSLLEKLLDVNDSMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMKEHA 437
           IQSLLEKLLD ND+MSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGN+NSM+EHA
Sbjct: 66  IQSLLEKLLDTNDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNMNSMREHA 125

Query: 436 ELLTSVREDISEYKASG--SPRMQLLRERAAIHGNISHMDEVISQAQATRAVLGSQRAMF 263
           ELL+SVR+DISEYKASG  SPRMQLLRERAAIHG+ISH+D+VISQAQ TRA L SQR +F
Sbjct: 126 ELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSISHIDDVISQAQTTRAALNSQRTLF 185

Query: 262 GDVQGKVKLLGEKFPIVRGLIGSIRRKRSRDTLILAAVIAACTLFLIIYWLSK 104
           GD QGKVKLL +KFPI+RGL+GSIRR+RSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 186 GDFQGKVKLLSDKFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK 238


>ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vinifera]
          Length = 239

 Score =  399 bits (1024), Expect = e-109
 Identities = 202/233 (86%), Positives = 217/233 (93%), Gaps = 2/233 (0%)
 Frame = -2

Query: 796 DLQESGWEELRKEARKIEGDLDVKLSSYAKLGARYTQSGYVDAASPTAGSGRSWKSTEME 617
           DLQESGWEELRKEARKIEGDLDVKLSSYAKLGAR+TQ GYVD  SPT  S RSWKS EME
Sbjct: 7   DLQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVSSSRSWKSMEME 66

Query: 616 IQSLLEKLLDVNDSMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNINSMKEHA 437
           IQSLLEKLLD ND+MSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGN+NSM+EHA
Sbjct: 67  IQSLLEKLLDTNDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNMNSMREHA 126

Query: 436 ELLTSVREDISEYKASG--SPRMQLLRERAAIHGNISHMDEVISQAQATRAVLGSQRAMF 263
           ELL+SVR+DISEYKASG  SPRMQLLRERAAIHG+ISH+D+VISQAQ TRA L SQR +F
Sbjct: 127 ELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSISHIDDVISQAQTTRAALNSQRTLF 186

Query: 262 GDVQGKVKLLGEKFPIVRGLIGSIRRKRSRDTLILAAVIAACTLFLIIYWLSK 104
           GD QGKVKLL +KFPI+RGL+GSIRR+RSRDTLIL+AVIAACTLFLIIYWLSK
Sbjct: 187 GDFQGKVKLLSDKFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK 239


Top