BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004967
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143762.1| PREDICTED: cytochrome b-c1 complex subunit R...   164   8e-39
gb|AFK37420.1| unknown [Lotus japonicus]                              164   1e-38
gb|AFK46510.1| unknown [Medicago truncatula]                          163   1e-38
ref|XP_003624512.1| Ubiquinol-cytochrome c reductase iron-sulfur...   163   1e-38
sp|P51134.1|UCRI4_TOBAC RecName: Full=Cytochrome b-c1 complex su...   160   2e-37

>ref|XP_004143762.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
           mitochondrial-like [Cucumis sativus]
           gi|449516924|ref|XP_004165496.1| PREDICTED: cytochrome
           b-c1 complex subunit Rieske-2, mitochondrial-like
           [Cucumis sativus]
          Length = 274

 Score =  164 bits (415), Expect = 8e-39
 Identities = 86/122 (70%), Positives = 99/122 (81%), Gaps = 2/122 (1%)
 Frame = +3

Query: 189 FRSITSLSNSFSIVPHHFH--RGFTADVALSKDENNLIPEIPPTVTALKDPSSKIVYDSS 362
           FRS     ++F I PH     RGF +D   S  ENNL+P++P T+ A+K+P+SKIVYD  
Sbjct: 40  FRS-AGFFHTFPIRPHFDRNSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEY 98

Query: 363 NHERFPPGDPSKRAAAYFVLTGGRFVYASLIRLLILKFVVSMSASKDVLALASLEVDLSS 542
           NHERFPPGDPSKRA AYFVL+GGRFVYASLIRLL+LKFV+SMSASKDVLALASLEVDLSS
Sbjct: 99  NHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSS 158

Query: 543 IE 548
           IE
Sbjct: 159 IE 160


>gb|AFK37420.1| unknown [Lotus japonicus]
          Length = 273

 Score =  164 bits (414), Expect = 1e-38
 Identities = 86/115 (74%), Positives = 95/115 (82%), Gaps = 2/115 (1%)
 Frame = +3

Query: 210 SNSFSIVPHHF--HRGFTADVALSKDENNLIPEIPPTVTALKDPSSKIVYDSSNHERFPP 383
           S+ FS+ P  F   RGF  +  +   EN+LIPEIP TV A+K+PSSKIVYD  NHERFPP
Sbjct: 45  SDPFSLRPEFFLPFRGFATESLVHTKENSLIPEIPATVAAVKNPSSKIVYDDHNHERFPP 104

Query: 384 GDPSKRAAAYFVLTGGRFVYASLIRLLILKFVVSMSASKDVLALASLEVDLSSIE 548
           GDPSKRA  YFVLTGGRFVYASLIRLL+LKFV+SMSASKDVLALASLEVDLSSIE
Sbjct: 105 GDPSKRAFTYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIE 159


>gb|AFK46510.1| unknown [Medicago truncatula]
          Length = 273

 Score =  163 bits (413), Expect = 1e-38
 Identities = 85/115 (73%), Positives = 96/115 (83%), Gaps = 2/115 (1%)
 Frame = +3

Query: 210 SNSFSIVPHHF--HRGFTADVALSKDENNLIPEIPPTVTALKDPSSKIVYDSSNHERFPP 383
           S+ FSI P  F   RGF  +  +   EN++IPEIP TV+A+K+PSSKIVYD  NHERFPP
Sbjct: 45  SDPFSIHPEFFLPFRGFATESLIHTKENSIIPEIPATVSAVKNPSSKIVYDEYNHERFPP 104

Query: 384 GDPSKRAAAYFVLTGGRFVYASLIRLLILKFVVSMSASKDVLALASLEVDLSSIE 548
           GDPSKRA AYFVLTGGRF YASLIRLL+LKFV+SMSASKDVLA+ASLEVDLSSIE
Sbjct: 105 GDPSKRAFAYFVLTGGRFAYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIE 159


>ref|XP_003624512.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Medicago
           truncatula] gi|355499527|gb|AES80730.1|
           Ubiquinol-cytochrome c reductase iron-sulfur subunit
           [Medicago truncatula]
          Length = 273

 Score =  163 bits (413), Expect = 1e-38
 Identities = 85/115 (73%), Positives = 96/115 (83%), Gaps = 2/115 (1%)
 Frame = +3

Query: 210 SNSFSIVPHHF--HRGFTADVALSKDENNLIPEIPPTVTALKDPSSKIVYDSSNHERFPP 383
           S+ FSI P  F   RGF  +  +   EN++IPEIP TV+A+K+PSSKIVYD  NHERFPP
Sbjct: 45  SDPFSIHPEFFLPFRGFATESLIHTKENSIIPEIPATVSAVKNPSSKIVYDEYNHERFPP 104

Query: 384 GDPSKRAAAYFVLTGGRFVYASLIRLLILKFVVSMSASKDVLALASLEVDLSSIE 548
           GDPSKRA AYFVLTGGRF YASLIRLL+LKFV+SMSASKDVLA+ASLEVDLSSIE
Sbjct: 105 GDPSKRAFAYFVLTGGRFAYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIE 159


>sp|P51134.1|UCRI4_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-4,
           mitochondrial; AltName: Full=Complex III subunit 5-4;
           AltName: Full=Rieske iron-sulfur protein 4; Short=RISP4;
           AltName: Full=Ubiquinol-cytochrome c reductase
           iron-sulfur subunit 4; Flags: Precursor
           gi|530054|gb|AAA20833.1| Rieske iron-sulfur protein
           [Nicotiana tabacum]
          Length = 236

 Score =  160 bits (404), Expect = 2e-37
 Identities = 84/121 (69%), Positives = 99/121 (81%)
 Frame = +3

Query: 186 GFRSITSLSNSFSIVPHHFHRGFTADVALSKDENNLIPEIPPTVTALKDPSSKIVYDSSN 365
           G  S+TS  NSFSI+      GF+++      +  L+P++PPTV A+K+P+SKIVYD  N
Sbjct: 9   GLASVTS--NSFSIIS-----GFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHN 61

Query: 366 HERFPPGDPSKRAAAYFVLTGGRFVYASLIRLLILKFVVSMSASKDVLALASLEVDLSSI 545
           HER+PPGDPSKRA AYFVLTGGRFVYASL+RLLILKFV+SMSASKDVLALASLEVDLSSI
Sbjct: 62  HERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSI 121

Query: 546 E 548
           E
Sbjct: 122 E 122