BLASTX nr result

ID: Bupleurum21_contig00004958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004958
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like ex...    67   2e-09
ref|XP_002283404.1| PREDICTED: uncharacterized protein LOC100252...    63   2e-08
ref|XP_002323311.1| predicted protein [Populus trichocarpa] gi|2...    62   7e-08
ref|XP_002308043.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002526721.1| conserved hypothetical protein [Ricinus comm...    60   3e-07

>ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2-like
           [Cucumis sativus]
          Length = 1159

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/40 (82%), Positives = 34/40 (85%)
 Frame = +3

Query: 24  MLDLFFAVAFSAVPLTLYFPPIRSLCLFVESLEQLFHQTA 143
           ML LFFAVAFSAVPLTLY PPIRSL LFVE+LE L H TA
Sbjct: 1   MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLHHTA 40


>ref|XP_002283404.1| PREDICTED: uncharacterized protein LOC100252006 [Vitis vinifera]
          Length = 66

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +3

Query: 24  MLDLFFAVAFSAVPLTLYFPPIRSLCLFVESLEQLFHQTA 143
           ML L FAVAFSAVPLTLY PPIRSL LFVE++E LF QTA
Sbjct: 1   MLQLLFAVAFSAVPLTLYVPPIRSLNLFVETVETLFRQTA 40


>ref|XP_002323311.1| predicted protein [Populus trichocarpa] gi|222867941|gb|EEF05072.1|
           predicted protein [Populus trichocarpa]
          Length = 66

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 24  MLDLFFAVAFSAVPLTLYFPPIRSLCLFVESLEQLFHQTA 143
           ML LFFAVAFSAVPLTLY PPIRSL LFVE++E +  QT+
Sbjct: 1   MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETMEDVLRQTS 40


>ref|XP_002308043.1| predicted protein [Populus trichocarpa] gi|222854019|gb|EEE91566.1|
           predicted protein [Populus trichocarpa]
          Length = 66

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +3

Query: 24  MLDLFFAVAFSAVPLTLYFPPIRSLCLFVESLEQLFHQTA 143
           ML LFFAVAFSA+PLTLY PPIRSL L VE++E  F QT+
Sbjct: 1   MLQLFFAVAFSAMPLTLYVPPIRSLSLLVETIEDFFRQTS 40


>ref|XP_002526721.1| conserved hypothetical protein [Ricinus communis]
           gi|223533910|gb|EEF35635.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 93

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +3

Query: 24  MLDLFFAVAFSAVPLTLYFPPIRSLCLFVESLEQLFHQT 140
           ML +FFAVAFSAVPLTLY PPIRSL LF+E++E+L  Q+
Sbjct: 1   MLQIFFAVAFSAVPLTLYVPPIRSLNLFLETIEELLRQS 39


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