BLASTX nr result

ID: Bupleurum21_contig00004952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004952
         (1322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301464.1| predicted protein [Populus trichocarpa] gi|2...   318   1e-84
emb|CAN69876.1| hypothetical protein VITISV_015631 [Vitis vinifera]   315   2e-83
ref|XP_002273421.2| PREDICTED: peptidyl-prolyl cis-trans isomera...   314   3e-83
ref|NP_001240987.1| uncharacterized protein LOC100785805 [Glycin...   312   1e-82
ref|XP_002515157.1| peptidyl-prolyl cis-trans isomerase, putativ...   306   8e-81

>ref|XP_002301464.1| predicted protein [Populus trichocarpa] gi|222843190|gb|EEE80737.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  318 bits (816), Expect = 1e-84
 Identities = 151/193 (78%), Positives = 167/193 (86%)
 Frame = -3

Query: 960 KQPSVAYRRLKCTNTATNDLELQAKVTTKCFFDVEIGGESVGRITIGLFGDVVPKTAENF 781
           K P +  +R+ C N+  ND++LQAKVTTKCFFDVE+GGE VGRI +GLFGDVVPKTAENF
Sbjct: 74  KAPYIKNQRMACANSMANDVDLQAKVTTKCFFDVEVGGELVGRIVMGLFGDVVPKTAENF 133

Query: 780 RVLCTGEKGFGYKGCSFHRIIKDFMIQXXXXXXXXXXXGKSIYGSSFKDESFALKHVGPG 601
           R LCTG+KG+GYKGCSFHRIIKDFMIQ           GKSIYGSSF+DESF+LKHVGPG
Sbjct: 134 RALCTGDKGYGYKGCSFHRIIKDFMIQGGDFTRGDGTGGKSIYGSSFEDESFSLKHVGPG 193

Query: 600 VLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVEKLESQETSRSDVPRMP 421
           VLSMANAGPNTNGSQFFIC+VKTPWLDNRHVVFGHVIDGMDVV KLES ETSRSD PR P
Sbjct: 194 VLSMANAGPNTNGSQFFICSVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRSDNPRKP 253

Query: 420 CRIINSGELPIDS 382
           CR++NSGELP+DS
Sbjct: 254 CRVVNSGELPLDS 266


>emb|CAN69876.1| hypothetical protein VITISV_015631 [Vitis vinifera]
          Length = 253

 Score =  315 bits (807), Expect = 2e-83
 Identities = 153/193 (79%), Positives = 165/193 (85%)
 Frame = -3

Query: 960 KQPSVAYRRLKCTNTATNDLELQAKVTTKCFFDVEIGGESVGRITIGLFGDVVPKTAENF 781
           K  S  +RRL C N+  N++ELQAKVTTKCFFDV+IGGE VGRI IGLFG+VVPKTAENF
Sbjct: 61  KASSAGHRRLMCVNSMANEVELQAKVTTKCFFDVDIGGEPVGRIVIGLFGEVVPKTAENF 120

Query: 780 RVLCTGEKGFGYKGCSFHRIIKDFMIQXXXXXXXXXXXGKSIYGSSFKDESFALKHVGPG 601
           RVLCTGEKG+GYKGCSFHRIIKDFMIQ           G SIYGSSF+DE+FAL HVGPG
Sbjct: 121 RVLCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDENFALTHVGPG 180

Query: 600 VLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVEKLESQETSRSDVPRMP 421
           VLSMANAGPNTNGSQFFICTVKTPWLD RHVVFGHVIDGMDVV KLESQETSRSD P++ 
Sbjct: 181 VLSMANAGPNTNGSQFFICTVKTPWLDRRHVVFGHVIDGMDVVRKLESQETSRSDYPKLT 240

Query: 420 CRIINSGELPIDS 382
           CRIIN GELP+DS
Sbjct: 241 CRIINCGELPMDS 253


>ref|XP_002273421.2| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-3,
           chloroplastic-like isoform 1 [Vitis vinifera]
           gi|297744066|emb|CBI37036.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  314 bits (805), Expect = 3e-83
 Identities = 153/193 (79%), Positives = 165/193 (85%)
 Frame = -3

Query: 960 KQPSVAYRRLKCTNTATNDLELQAKVTTKCFFDVEIGGESVGRITIGLFGDVVPKTAENF 781
           K  S  +RRL C N+  N++ELQAKVTTKCFFDV+IGGE VGRI IGLFG+VVPKTAENF
Sbjct: 61  KVNSAGHRRLMCVNSMANEVELQAKVTTKCFFDVDIGGEPVGRIVIGLFGEVVPKTAENF 120

Query: 780 RVLCTGEKGFGYKGCSFHRIIKDFMIQXXXXXXXXXXXGKSIYGSSFKDESFALKHVGPG 601
           RVLCTGEKG+GYKGCSFHRIIKDFMIQ           G SIYGSSF+DE+FAL HVGPG
Sbjct: 121 RVLCTGEKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDENFALTHVGPG 180

Query: 600 VLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVEKLESQETSRSDVPRMP 421
           VLSMANAGPNTNGSQFFICTVKTPWLD RHVVFGHVIDGMDVV KLESQETSRSD P++ 
Sbjct: 181 VLSMANAGPNTNGSQFFICTVKTPWLDRRHVVFGHVIDGMDVVRKLESQETSRSDYPKLT 240

Query: 420 CRIINSGELPIDS 382
           CRIIN GELP+DS
Sbjct: 241 CRIINCGELPMDS 253


>ref|NP_001240987.1| uncharacterized protein LOC100785805 [Glycine max]
           gi|255645203|gb|ACU23099.1| unknown [Glycine max]
          Length = 260

 Score =  312 bits (799), Expect = 1e-82
 Identities = 150/189 (79%), Positives = 161/189 (85%)
 Frame = -3

Query: 951 SVAYRRLKCTNTATNDLELQAKVTTKCFFDVEIGGESVGRITIGLFGDVVPKTAENFRVL 772
           S+ YRR+ C N A N +ELQAKVTTKCFFDVE+GGE VGRI +GLFG+VVPKT ENFR L
Sbjct: 71  SIGYRRMTCVNAADNVVELQAKVTTKCFFDVEVGGEPVGRIVLGLFGEVVPKTVENFRAL 130

Query: 771 CTGEKGFGYKGCSFHRIIKDFMIQXXXXXXXXXXXGKSIYGSSFKDESFALKHVGPGVLS 592
           CTGEKG+GYKG SFHRIIKDFMIQ           G SIYG SFKDESFALKHVGPGVLS
Sbjct: 131 CTGEKGYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGPSFKDESFALKHVGPGVLS 190

Query: 591 MANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVEKLESQETSRSDVPRMPCRI 412
           MANAGPNTNGSQFFICTVKTPWLDNRHVVFGH+IDGMDVV+ LESQETSR DVPR PCRI
Sbjct: 191 MANAGPNTNGSQFFICTVKTPWLDNRHVVFGHIIDGMDVVKTLESQETSRLDVPRKPCRI 250

Query: 411 INSGELPID 385
           +N GELPI+
Sbjct: 251 VNCGELPIE 259


>ref|XP_002515157.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
           gi|223545637|gb|EEF47141.1| peptidyl-prolyl cis-trans
           isomerase, putative [Ricinus communis]
          Length = 261

 Score =  306 bits (784), Expect = 8e-81
 Identities = 149/192 (77%), Positives = 160/192 (83%)
 Frame = -3

Query: 960 KQPSVAYRRLKCTNTATNDLELQAKVTTKCFFDVEIGGESVGRITIGLFGDVVPKTAENF 781
           K PSV ++R+ C     NDLE+QAKVTTK FFDV+IGGE  GRI +GLFGDVVPKTAENF
Sbjct: 69  KAPSVKHQRMACIKAMANDLEVQAKVTTKVFFDVDIGGEPAGRIVMGLFGDVVPKTAENF 128

Query: 780 RVLCTGEKGFGYKGCSFHRIIKDFMIQXXXXXXXXXXXGKSIYGSSFKDESFALKHVGPG 601
           R LCTG+KG+GYKGCSFHRIIKDFMIQ           G SI+GSSF+DESF LKHVGPG
Sbjct: 129 RALCTGDKGYGYKGCSFHRIIKDFMIQGGDFTEGDGTGGVSIFGSSFEDESFDLKHVGPG 188

Query: 600 VLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVEKLESQETSRSDVPRMP 421
           VLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFG VIDGMDVV KLES ETSRSD PR P
Sbjct: 189 VLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGQVIDGMDVVRKLESVETSRSDYPRKP 248

Query: 420 CRIINSGELPID 385
           CRIIN GELP+D
Sbjct: 249 CRIINCGELPLD 260


Top