BLASTX nr result
ID: Bupleurum21_contig00004947
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00004947
(1797 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chlorop... 433 e-119
ref|XP_004160413.1| PREDICTED: zinc finger protein VAR3, chlorop... 430 e-118
ref|XP_004137347.1| PREDICTED: zinc finger protein VAR3, chlorop... 430 e-118
ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago trun... 390 e-106
ref|XP_002321514.1| predicted protein [Populus trichocarpa] gi|2... 384 e-104
>ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
vinifera] gi|297734333|emb|CBI15580.3| unnamed protein
product [Vitis vinifera]
Length = 410
Score = 433 bits (1113), Expect = e-119
Identities = 210/396 (53%), Positives = 272/396 (68%), Gaps = 3/396 (0%)
Frame = +2
Query: 275 ALRLNTHHRFYSSSHSVAAVTTEINNNDNNSGVETVAHHHHPWPEWLLFVDRLNAKGYFS 454
A+RL+ ++ S +V VT + T +HH HPWPEW+ F+DRL KGYFS
Sbjct: 25 AIRLSFSPSRFTCSAAVDTVTAD----------STDSHHRHPWPEWVTFIDRLKTKGYFS 74
Query: 455 STQVSLGSNDYKDMNLMRDASLNFARHRLDIFKSLSIQYIQAVVERGCPNVLRKSVNSGK 634
+ D +MNL +DA L FAR R D+FKSLS + IQ VVE GCPN+ RK+VNS K
Sbjct: 75 EALPASADYD-TNMNLFKDACLIFARDRFDVFKSLSRKDIQTVVEGGCPNLFRKAVNSAK 133
Query: 635 RLRLYLHLHEPDVCSTCLLRGCCDRANVIPKESEAEAGTVDVVRILLAYALDSAAINGGQ 814
RLR ++ L E DVCS C LRG CDRA V+ KESEA A TVD+VRILL YALD + G+
Sbjct: 134 RLRAFVRLDEGDVCSACNLRGSCDRAYVLLKESEAAARTVDIVRILLFYALDPL-VTSGE 192
Query: 815 KSPAREHIELSAKKLLLELIELSDKPPTSEISKPTV---KALDQTSQLRDDKISPDVEFK 985
K P RE +E+SA+KLL ELIELSD P ++KP + +Q L DD++ +V+ K
Sbjct: 193 KPPGRELVEVSARKLLSELIELSDTPLDPALAKPAAIPPRRKEQHMNLTDDEMPQNVQMK 252
Query: 986 RGDWMCPKCDFMNFSRNVKCRECGEDGPKKISWVDTEIKKGDWICPDCSYMNFSRNIRCL 1165
+GDW+CP C+F+NF+RN +C +C EDGPK+ S E+KKGDW CP+C++MNFSRNIRCL
Sbjct: 253 KGDWICPNCNFLNFARNTQCMKCREDGPKRDSLNVIEMKKGDWTCPECNFMNFSRNIRCL 312
Query: 1166 KCEAGGPKRVGSNNLEMKKGDWNCPQCKYMNFASNKKCKCCQEERPNIELRPGDWQCSEC 1345
KC A GPKRV + ++ MKKGDWNCPQC +MNFAS +C C+E RP +L PG+W+C C
Sbjct: 313 KCRAEGPKRVDAADIPMKKGDWNCPQCAFMNFASKTECFRCREPRPKRQLNPGEWECPSC 372
Query: 1346 GYVNYAKNVICRKCDVDRPKEKVERRYEDQLWRKPS 1453
+VNY +N +C KC+ D+PKE YE+ +W+KPS
Sbjct: 373 DFVNYRRNTVCLKCNRDQPKE-AATPYEEHVWKKPS 407
>ref|XP_004160413.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Cucumis
sativus]
Length = 445
Score = 430 bits (1105), Expect = e-118
Identities = 201/370 (54%), Positives = 257/370 (69%), Gaps = 17/370 (4%)
Frame = +2
Query: 392 HHPWPEWLLFVDRLNAKGYF------SSTQVSLGSN-------DYKDMNLMRDASLNFAR 532
HHPWPEW+ FVD L KGY +T G DY DMN+++DA ++FAR
Sbjct: 65 HHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYSDMNVLKDACVSFAR 124
Query: 533 HRLDIFKSLSIQYIQAVVERGCPNVLRKSVNSGKRLRLYLHLHEPDVCSTCLLRGCCDRA 712
R DIFKSLS IQ +V+ GCPN+LRK+VNS KRLR Y+ L E DVCSTC LRG CDRA
Sbjct: 125 DRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRA 184
Query: 713 NVIPKESEAEAGTVDVVRILLAYALDSAAINGGQKSPAREHIELSAKKLLLELIELSDKP 892
VI K+++ A TVDV R+LLAYALD ++GG K REH+E+S +KLL +L ELS+KP
Sbjct: 185 YVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSELSEKP 244
Query: 893 ----PTSEISKPTVKALDQTSQLRDDKISPDVEFKRGDWMCPKCDFMNFSRNVKCRECGE 1060
E++KP + +++S+ +D + DVE KRGDWMC KC+F+NFSRN C +C E
Sbjct: 245 LDPAAVREVTKPPTRK-EKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLKCNE 303
Query: 1061 DGPKKISWVDTEIKKGDWICPDCSYMNFSRNIRCLKCEAGGPKRVGSNNLEMKKGDWNCP 1240
DGPK++ D E+K GDWICP+C +MNFSRNIRC+KC+ GPK+V EMKKGDW CP
Sbjct: 304 DGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDWVCP 363
Query: 1241 QCKYMNFASNKKCKCCQEERPNIELRPGDWQCSECGYVNYAKNVICRKCDVDRPKEKVER 1420
QC +MNFASNKKC C+E RP EL G+W+C C YVN+ N+ CRKC+ +RP++++
Sbjct: 364 QCSFMNFASNKKCLRCRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQEISD 423
Query: 1421 RYEDQLWRKP 1450
YE+QLW P
Sbjct: 424 EYEEQLWESP 433
>ref|XP_004137347.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Cucumis
sativus]
Length = 445
Score = 430 bits (1105), Expect = e-118
Identities = 201/370 (54%), Positives = 257/370 (69%), Gaps = 17/370 (4%)
Frame = +2
Query: 392 HHPWPEWLLFVDRLNAKGYF------SSTQVSLGSN-------DYKDMNLMRDASLNFAR 532
HHPWPEW+ FVD L KGY +T G DY DMN+++DA ++FAR
Sbjct: 65 HHPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYSDMNVLKDACVSFAR 124
Query: 533 HRLDIFKSLSIQYIQAVVERGCPNVLRKSVNSGKRLRLYLHLHEPDVCSTCLLRGCCDRA 712
R DIFKSLS IQ +V+ GCPN+LRK+VNS KRLR Y+ L E DVCSTC LRG CDRA
Sbjct: 125 DRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGSCDRA 184
Query: 713 NVIPKESEAEAGTVDVVRILLAYALDSAAINGGQKSPAREHIELSAKKLLLELIELSDKP 892
VI K+++ A TVDV R+LLAYALD ++GG K REH+E+S +KLL +L ELS+KP
Sbjct: 185 YVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSELSEKP 244
Query: 893 ----PTSEISKPTVKALDQTSQLRDDKISPDVEFKRGDWMCPKCDFMNFSRNVKCRECGE 1060
E++KP + +++S+ +D + DVE KRGDWMC KC+F+NFSRN C +C E
Sbjct: 245 IDPAAVREVTKPPTRK-EKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLKCNE 303
Query: 1061 DGPKKISWVDTEIKKGDWICPDCSYMNFSRNIRCLKCEAGGPKRVGSNNLEMKKGDWNCP 1240
DGPK++ D E+K GDWICP+C +MNFSRNIRC+KC+ GPK+V EMKKGDW CP
Sbjct: 304 DGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDWVCP 363
Query: 1241 QCKYMNFASNKKCKCCQEERPNIELRPGDWQCSECGYVNYAKNVICRKCDVDRPKEKVER 1420
QC +MNFASNKKC C+E RP EL G+W+C C YVN+ N+ CRKC+ +RP++++
Sbjct: 364 QCSFMNFASNKKCLRCRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQEISD 423
Query: 1421 RYEDQLWRKP 1450
YE+QLW P
Sbjct: 424 EYEEQLWESP 433
>ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago truncatula]
gi|355494836|gb|AES76039.1| E3 SUMO-protein ligase RanBP2
[Medicago truncatula]
Length = 470
Score = 390 bits (1001), Expect = e-106
Identities = 204/393 (51%), Positives = 254/393 (64%), Gaps = 11/393 (2%)
Frame = +2
Query: 257 PPIHTSALRLNTHHRFYSSSHSVAAVTTEINNNDNNSGVETVAHHHHPWPEWLLFVDRLN 436
PP+H HHR +S + + T +S V HPWPEW+ FVDRL
Sbjct: 35 PPLH--------HHRHQTSFSAFSTSTAAAEEESLSSTV-------HPWPEWISFVDRLR 79
Query: 437 AKGYFSSTQVSLGSNDYKDMNLMRDASLNFARHRLDIFKSLSIQYIQAVVERGCPNVLRK 616
AKGY S + ++ Y D+NL++DASL+FAR R D+FK LS + IQAVVE GCPN LRK
Sbjct: 80 AKGYLSKSADD--NSVYSDINLLKDASLSFARDRYDVFKLLSSEDIQAVVEDGCPNFLRK 137
Query: 617 SVNSGKRLRLYLHLHEPDVCSTCLLRGCCDRANVIPKESEAEAGTVDVVRILLAYALDSA 796
+VNS KRLR +L L E DVCS C LRG CDRA VI KESEA+A TVD+VRILL YA+D
Sbjct: 138 AVNSAKRLRAHLRLDEGDVCSACNLRGSCDRAYVILKESEADARTVDIVRILLFYAIDPL 197
Query: 797 AINGGQKSPAREHIELSAKKLLLELIELSD----KPPTSEISKPT----VKALDQTSQLR 952
++GG+K P RE IE SA+KLL +LIELS+ PP SK T V + S
Sbjct: 198 VLSGGEKPPGREVIESSARKLLSQLIELSEWSPPPPPLPAYSKSTSQKDVSKVKPLSFKA 257
Query: 953 DDKISPDVEFKRGDWMCPKCDFMNFSRNVKCRECGEDGPKKISWVDTEIKKGDWICPDCS 1132
+ +S +VE K+GDW+C KC+FMNFSRN KC C EDGPK E+K+GDWIC +C+
Sbjct: 258 AEMLSKNVEMKKGDWVCQKCNFMNFSRNRKCLNCEEDGPKSDDPRTFEMKEGDWICTECN 317
Query: 1133 YMNFSRNIRCLKCEAGGPKRVG---SNNLEMKKGDWNCPQCKYMNFASNKKCKCCQEERP 1303
+MNFSRNI CL+C+ GPKRV +N ++MKKGDW CPQC +MNFASN KC C E RP
Sbjct: 318 FMNFSRNITCLECKTEGPKRVNRLDTNEVQMKKGDWTCPQCGFMNFASNVKCFKCPEPRP 377
Query: 1304 NIELRPGDWQCSECGYVNYAKNVICRKCDVDRP 1402
+ PGDW C +C ++N+A C +C P
Sbjct: 378 --KKHPGDWSCPKCDFMNFASKDKCFRCQESNP 408
>ref|XP_002321514.1| predicted protein [Populus trichocarpa] gi|222868510|gb|EEF05641.1|
predicted protein [Populus trichocarpa]
Length = 457
Score = 384 bits (985), Expect = e-104
Identities = 190/380 (50%), Positives = 248/380 (65%), Gaps = 10/380 (2%)
Frame = +2
Query: 296 HRFYSSSHSVAAVTTEINNNDN-NSGVETVAHHHHPWPEWLLFVDRLNAKGYFSSTQVSL 472
H + SSS + A T +N + NS ++ HPWPEW++FVD+L A+GYF T
Sbjct: 43 HLYCSSSTAATAATATTDNTETLNSLLQERKQKQHPWPEWVIFVDKLKARGYFMQTSAKE 102
Query: 473 GSND------YKDMNLMRDASLNFARHRLDIFKSLSIQYIQAVVERGCPNVLRKSVNSGK 634
D Y DMN +++A L+FAR R DIFKSLS IQ VVE GCPN+LRK VNS K
Sbjct: 103 EDGDTTSEIAYTDMNQLKNACLSFARDRYDIFKSLSRPDIQTVVESGCPNLLRKVVNSAK 162
Query: 635 RLRLYLHLHEPDVCSTCLLRGCCDRANVIPKESEAEAGTVDVVRILLAYALDSAAINGGQ 814
R+R Y+ E D C TC RG CDRA V K ++AE TVD+VR+L+ +ALD I+GGQ
Sbjct: 163 RMRAYVQKDEGDACGTCTHRGFCDRAYVTLKGNDAEGRTVDIVRVLMFHALDPFVISGGQ 222
Query: 815 KSPAREHIELSAKKLLLELIELSDKPPTSEISKPTVKALDQTSQ---LRDDKISPDVEFK 985
KSP E IE SA+KLL EL ELS+ P + K KA + + D ++ +VE K
Sbjct: 223 KSPGSELIETSARKLLSELTELSETPQDPALPKHIPKASHKKERDVDFMDGQLCDNVETK 282
Query: 986 RGDWMCPKCDFMNFSRNVKCRECGEDGPKKISWVDTEIKKGDWICPDCSYMNFSRNIRCL 1165
+ DWMC KC+FMNFS+N +C++CGE KK + E KKGDWIC DC ++NFSRNI+CL
Sbjct: 283 KEDWMCTKCNFMNFSKNKRCQKCGEQSAKKDGDNNIEAKKGDWICSDCEFVNFSRNIKCL 342
Query: 1166 KCEAGGPKRVGSNNLEMKKGDWNCPQCKYMNFASNKKCKCCQEERPNIELRPGDWQCSEC 1345
KC+A GPKR G ++++MKKGDWNC C +MNFASNK C C++ RP E + G+W C C
Sbjct: 343 KCKAEGPKRPGVDDVKMKKGDWNCNSCGFMNFASNKTCLRCRDPRP--ERKAGEWNCPSC 400
Query: 1346 GYVNYAKNVICRKCDVDRPK 1405
++N++KN +C KC+ PK
Sbjct: 401 DFLNFSKNKVCLKCNCVSPK 420
Score = 82.0 bits (201), Expect = 5e-13
Identities = 36/80 (45%), Positives = 49/80 (61%)
Frame = +2
Query: 968 PDVEFKRGDWMCPKCDFMNFSRNVKCRECGEDGPKKISWVDTEIKKGDWICPDCSYMNFS 1147
P E K G+W CP CDF+NFS+N C +C PK+++ G+W CP C ++NFS
Sbjct: 386 PRPERKAGEWNCPSCDFLNFSKNKVCLKCNCVSPKRMA--------GEWNCPSCDFLNFS 437
Query: 1148 RNIRCLKCEAGGPKRVGSNN 1207
RN C+KC+ P+ GSNN
Sbjct: 438 RNKDCIKCKCKAPQ--GSNN 455