BLASTX nr result

ID: Bupleurum21_contig00004943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004943
         (1073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246...   268   e-129
emb|CBI31609.3| unnamed protein product [Vitis vinifera]              268   e-129
ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|2...   261   e-125
ref|XP_002315198.1| predicted protein [Populus trichocarpa] gi|2...   255   e-122
ref|XP_002524240.1| protein with unknown function [Ricinus commu...   242   e-121

>ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246247 [Vitis vinifera]
          Length = 805

 Score =  268 bits (686), Expect(2) = e-129
 Identities = 130/154 (84%), Positives = 139/154 (90%), Gaps = 1/154 (0%)
 Frame = -3

Query: 909 NF*MNDPMLLAASGGDTVKLFDVSVKPDDPCTLTYTPSPGFQVNSVKWNHTNLVVASAGD 730
           NF      LLAASGGDTVKLFDVSV+P DPC L+Y+PSPG QVNSVKWNHTNLVVASAGD
Sbjct: 3   NFADPSTALLAASGGDTVKLFDVSVEPGDPCALSYSPSPGHQVNSVKWNHTNLVVASAGD 62

Query: 729 DKKITLWRKNGQSMGTIPASG-EGGDNIEECISSISFSNKGSRYICSGGSGQVVRIWDLQ 553
           D+K++LWRKNGQSMGTIP SG + GDNIEE I +ISFSNKGSRYICSGGSGQVVRIWDLQ
Sbjct: 63  DRKVSLWRKNGQSMGTIPVSGTDSGDNIEESILAISFSNKGSRYICSGGSGQVVRIWDLQ 122

Query: 552 RKRCIKWLRGHTDTITSAMYNCKDEHLASISLSG 451
           RKRCIKWLRGHTDTIT AMYNCKDEHLASISL+G
Sbjct: 123 RKRCIKWLRGHTDTITGAMYNCKDEHLASISLNG 156



 Score =  222 bits (566), Expect(2) = e-129
 Identities = 106/120 (88%), Positives = 114/120 (95%)
 Frame = -2

Query: 361 KDPNGQVLRVLDYSRISRHLLVTAGDDGSVHLWDSTGRSPKVSWLKQHSAPTAGVSFSPT 182
           KDPN QV RVLDYSRISRHLLVTAGDDGS+H+WD+TGRSPKVSWLKQHSAPTAGVSFSP+
Sbjct: 173 KDPNEQVSRVLDYSRISRHLLVTAGDDGSIHMWDTTGRSPKVSWLKQHSAPTAGVSFSPS 232

Query: 181 NDKVIASIGLDKKLYTLDSGSRRSVSCIPYEAPFSSLAFRDDGNILAAGTSNGRVVFYDV 2
           NDK+IA++GLDKKLYT D+GSRR  SCIPYEAPFSSLAFRDDG ILAAGTSNGRVVFYDV
Sbjct: 233 NDKIIATVGLDKKLYTFDTGSRRPSSCIPYEAPFSSLAFRDDGLILAAGTSNGRVVFYDV 292


>emb|CBI31609.3| unnamed protein product [Vitis vinifera]
          Length = 779

 Score =  268 bits (686), Expect(2) = e-129
 Identities = 130/154 (84%), Positives = 139/154 (90%), Gaps = 1/154 (0%)
 Frame = -3

Query: 909 NF*MNDPMLLAASGGDTVKLFDVSVKPDDPCTLTYTPSPGFQVNSVKWNHTNLVVASAGD 730
           NF      LLAASGGDTVKLFDVSV+P DPC L+Y+PSPG QVNSVKWNHTNLVVASAGD
Sbjct: 2   NFADPSTALLAASGGDTVKLFDVSVEPGDPCALSYSPSPGHQVNSVKWNHTNLVVASAGD 61

Query: 729 DKKITLWRKNGQSMGTIPASG-EGGDNIEECISSISFSNKGSRYICSGGSGQVVRIWDLQ 553
           D+K++LWRKNGQSMGTIP SG + GDNIEE I +ISFSNKGSRYICSGGSGQVVRIWDLQ
Sbjct: 62  DRKVSLWRKNGQSMGTIPVSGTDSGDNIEESILAISFSNKGSRYICSGGSGQVVRIWDLQ 121

Query: 552 RKRCIKWLRGHTDTITSAMYNCKDEHLASISLSG 451
           RKRCIKWLRGHTDTIT AMYNCKDEHLASISL+G
Sbjct: 122 RKRCIKWLRGHTDTITGAMYNCKDEHLASISLNG 155



 Score =  222 bits (566), Expect(2) = e-129
 Identities = 106/120 (88%), Positives = 114/120 (95%)
 Frame = -2

Query: 361 KDPNGQVLRVLDYSRISRHLLVTAGDDGSVHLWDSTGRSPKVSWLKQHSAPTAGVSFSPT 182
           KDPN QV RVLDYSRISRHLLVTAGDDGS+H+WD+TGRSPKVSWLKQHSAPTAGVSFSP+
Sbjct: 172 KDPNEQVSRVLDYSRISRHLLVTAGDDGSIHMWDTTGRSPKVSWLKQHSAPTAGVSFSPS 231

Query: 181 NDKVIASIGLDKKLYTLDSGSRRSVSCIPYEAPFSSLAFRDDGNILAAGTSNGRVVFYDV 2
           NDK+IA++GLDKKLYT D+GSRR  SCIPYEAPFSSLAFRDDG ILAAGTSNGRVVFYDV
Sbjct: 232 NDKIIATVGLDKKLYTFDTGSRRPSSCIPYEAPFSSLAFRDDGLILAAGTSNGRVVFYDV 291


>ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|222851940|gb|EEE89487.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  261 bits (666), Expect(2) = e-125
 Identities = 126/146 (86%), Positives = 135/146 (92%), Gaps = 1/146 (0%)
 Frame = -3

Query: 885 LLAASGGDTVKLFDVSVKPDDPCTLTYTPSPGFQVNSVKWNHTNLVVASAGDDKKITLWR 706
           LLAASGGDTVKLFDVSV+P DPCTL+YTP+PG  VN+VKWNHTNLVVASAG+DKKI+LWR
Sbjct: 11  LLAASGGDTVKLFDVSVEPGDPCTLSYTPTPGCLVNAVKWNHTNLVVASAGEDKKISLWR 70

Query: 705 KNGQSMGTIPASG-EGGDNIEECISSISFSNKGSRYICSGGSGQVVRIWDLQRKRCIKWL 529
           KNGQSMGTIP SG + GD+IEE I +ISFSNKGSRYICSGGSGQVVRIWDLQRKRCIKWL
Sbjct: 71  KNGQSMGTIPVSGTDSGDSIEESILAISFSNKGSRYICSGGSGQVVRIWDLQRKRCIKWL 130

Query: 528 RGHTDTITSAMYNCKDEHLASISLSG 451
           RGHT  IT AMYNCKDEHLASISLSG
Sbjct: 131 RGHTSPITGAMYNCKDEHLASISLSG 156



 Score =  214 bits (546), Expect(2) = e-125
 Identities = 103/120 (85%), Positives = 112/120 (93%)
 Frame = -2

Query: 361 KDPNGQVLRVLDYSRISRHLLVTAGDDGSVHLWDSTGRSPKVSWLKQHSAPTAGVSFSPT 182
           KDPN QVLRVLDYSR+SRHLLVTAGDDGSVHLWD+TGRSPKVSW KQHSAPTAG+SFSP+
Sbjct: 173 KDPNKQVLRVLDYSRVSRHLLVTAGDDGSVHLWDTTGRSPKVSWSKQHSAPTAGISFSPS 232

Query: 181 NDKVIASIGLDKKLYTLDSGSRRSVSCIPYEAPFSSLAFRDDGNILAAGTSNGRVVFYDV 2
           NDK+IAS+GLDKKLYT DSGSRR  S I YEAPFSSL+FRDDG +LAAGTS+GRVVFYDV
Sbjct: 233 NDKIIASVGLDKKLYTYDSGSRRHTSLISYEAPFSSLSFRDDGWVLAAGTSSGRVVFYDV 292


>ref|XP_002315198.1| predicted protein [Populus trichocarpa] gi|222864238|gb|EEF01369.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score =  255 bits (651), Expect(2) = e-122
 Identities = 125/146 (85%), Positives = 133/146 (91%), Gaps = 1/146 (0%)
 Frame = -3

Query: 885 LLAASGGDTVKLFDVSVKPDDPCTLTYTPSPGFQVNSVKWNHTNLVVASAGDDKKITLWR 706
           LLAASGGDTVKLFDVSV P DPCTL YTP+PG  VNSVKWNHTNLVVASAG+DKKI+LWR
Sbjct: 11  LLAASGGDTVKLFDVSVDPGDPCTLNYTPTPGCVVNSVKWNHTNLVVASAGEDKKISLWR 70

Query: 705 KNGQSMGTIPASG-EGGDNIEECISSISFSNKGSRYICSGGSGQVVRIWDLQRKRCIKWL 529
           KNGQ+MGTIP SG +  D+IEE +S+ISFSNKGSRYICSGGSGQVVRIWDLQRKRCIK L
Sbjct: 71  KNGQNMGTIPVSGTDSRDSIEESLSAISFSNKGSRYICSGGSGQVVRIWDLQRKRCIKSL 130

Query: 528 RGHTDTITSAMYNCKDEHLASISLSG 451
           RGHT TIT AMYNCKDEHLASISLSG
Sbjct: 131 RGHTSTITGAMYNCKDEHLASISLSG 156



 Score =  210 bits (535), Expect(2) = e-122
 Identities = 102/120 (85%), Positives = 110/120 (91%)
 Frame = -2

Query: 361 KDPNGQVLRVLDYSRISRHLLVTAGDDGSVHLWDSTGRSPKVSWLKQHSAPTAGVSFSPT 182
           KDP+ QVLRVLDYSR+SRHLLVTAGDDGSVHLWD T RSPKVSWLKQHSAPT G+SFSP+
Sbjct: 173 KDPHEQVLRVLDYSRVSRHLLVTAGDDGSVHLWDITSRSPKVSWLKQHSAPTVGISFSPS 232

Query: 181 NDKVIASIGLDKKLYTLDSGSRRSVSCIPYEAPFSSLAFRDDGNILAAGTSNGRVVFYDV 2
           NDK+IAS+GLDKKLYT +SGSRR  S I YEAPFSSLAFRDDG ILAAGTS+GRVVFYDV
Sbjct: 233 NDKIIASVGLDKKLYTYESGSRRHTSLISYEAPFSSLAFRDDGLILAAGTSSGRVVFYDV 292


>ref|XP_002524240.1| protein with unknown function [Ricinus communis]
           gi|223536517|gb|EEF38164.1| protein with unknown
           function [Ricinus communis]
          Length = 799

 Score =  242 bits (618), Expect(2) = e-121
 Identities = 116/146 (79%), Positives = 128/146 (87%), Gaps = 1/146 (0%)
 Frame = -3

Query: 885 LLAASGGDTVKLFDVSVKPDDPCTLTYTPSPGFQVNSVKWNHTNLVVASAGDDKKITLWR 706
           LLAASGGDTVKLFDVS +  D C ++Y PSPG  VNSVKWNHTNLVVASAG+DKKI+LWR
Sbjct: 10  LLAASGGDTVKLFDVSEEEGDRCIMSYAPSPGCLVNSVKWNHTNLVVASAGEDKKISLWR 69

Query: 705 KNGQSMGTIPASG-EGGDNIEECISSISFSNKGSRYICSGGSGQVVRIWDLQRKRCIKWL 529
           K GQSMGTIP +G + GDNI+E I +ISFSNKGSRY+CSGGSGQ VRIWDLQR RCIKWL
Sbjct: 70  KKGQSMGTIPVAGTDSGDNIDESILAISFSNKGSRYLCSGGSGQAVRIWDLQRNRCIKWL 129

Query: 528 RGHTDTITSAMYNCKDEHLASISLSG 451
           RGHT TIT A+YNCKDEHLASISL+G
Sbjct: 130 RGHTSTITGALYNCKDEHLASISLNG 155



 Score =  220 bits (561), Expect(2) = e-121
 Identities = 106/120 (88%), Positives = 114/120 (95%)
 Frame = -2

Query: 361 KDPNGQVLRVLDYSRISRHLLVTAGDDGSVHLWDSTGRSPKVSWLKQHSAPTAGVSFSPT 182
           KDPN QVLRVLDYSRISRHLLVTAGDDGSVHLWD+TGR+PKVSWLKQHSAPTAG+SFSP+
Sbjct: 172 KDPNEQVLRVLDYSRISRHLLVTAGDDGSVHLWDTTGRNPKVSWLKQHSAPTAGISFSPS 231

Query: 181 NDKVIASIGLDKKLYTLDSGSRRSVSCIPYEAPFSSLAFRDDGNILAAGTSNGRVVFYDV 2
           NDK+IAS+GLDKKLYT D+GSRR  SCI YEAPFSSLAFRDDG ILAAGTS+GRVVFYDV
Sbjct: 232 NDKIIASVGLDKKLYTFDAGSRRPSSCISYEAPFSSLAFRDDGLILAAGTSSGRVVFYDV 291


Top