BLASTX nr result

ID: Bupleurum21_contig00004929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004929
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269448.1| PREDICTED: uncharacterized WD repeat-contain...   283   1e-74
ref|XP_004163055.1| PREDICTED: uncharacterized WD repeat-contain...   265   3e-69
ref|XP_004152858.1| PREDICTED: uncharacterized WD repeat-contain...   265   3e-69
ref|XP_002874820.1| transducin family protein [Arabidopsis lyrat...   265   4e-69
ref|XP_002534411.1| WD-repeat protein, putative [Ricinus communi...   263   1e-68

>ref|XP_002269448.1| PREDICTED: uncharacterized WD repeat-containing protein C1672.07
           isoform 1 [Vitis vinifera] gi|297740341|emb|CBI30523.3|
           unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  283 bits (725), Expect = 1e-74
 Identities = 134/158 (84%), Positives = 147/158 (93%)
 Frame = +2

Query: 95  MGIFEPFRAIGYITSSVPFSVYRLGTETFVTVSIGKAWQIYNCAKLTLVLAGPQLPKKIR 274
           MGIFEPFRAIGYITS+VPFSV RLGTETFVTVS+GKAWQIYNCAKL LVL GPQLPKKIR
Sbjct: 1   MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAWQIYNCAKLNLVLVGPQLPKKIR 60

Query: 275 ALASYRDYTFAAYGNDIAVFKRAHQVATWSRHSSKVNQLLLFGEHILSVDVEGNIFTWAF 454
           ALASYRDYTFAAYGNDIAVFKRAHQVATWSRH++KVN LLLFGE ILS+DV GN+F WAF
Sbjct: 61  ALASYRDYTFAAYGNDIAVFKRAHQVATWSRHNAKVNLLLLFGEQILSIDVGGNMFMWAF 120

Query: 455 KEIDQNPSPVGHILLDGKFTPSCIMHPDTYLNKVLLGS 568
           K I QN +P+GH++L+ KF+PSCIMHPDTYLNKV+LGS
Sbjct: 121 KGIQQNLAPIGHVMLEDKFSPSCIMHPDTYLNKVILGS 158


>ref|XP_004163055.1| PREDICTED: uncharacterized WD repeat-containing protein
           C1672.07-like [Cucumis sativus]
          Length = 891

 Score =  265 bits (678), Expect = 3e-69
 Identities = 125/158 (79%), Positives = 142/158 (89%)
 Frame = +2

Query: 95  MGIFEPFRAIGYITSSVPFSVYRLGTETFVTVSIGKAWQIYNCAKLTLVLAGPQLPKKIR 274
           MGIFEP+RAIGYIT+SVPFSV RLGTETFVTVS+GKA+Q+YNCAKL LVL GPQLPKKIR
Sbjct: 1   MGIFEPYRAIGYITNSVPFSVQRLGTETFVTVSVGKAFQVYNCAKLNLVLVGPQLPKKIR 60

Query: 275 ALASYRDYTFAAYGNDIAVFKRAHQVATWSRHSSKVNQLLLFGEHILSVDVEGNIFTWAF 454
           ALASYR+YTFAAYG+DIAVFKRAHQVA WS H +KVN LLLFG+HILSVD+ GN+F W F
Sbjct: 61  ALASYREYTFAAYGSDIAVFKRAHQVANWSSHKAKVNLLLLFGDHILSVDINGNMFMWPF 120

Query: 455 KEIDQNPSPVGHILLDGKFTPSCIMHPDTYLNKVLLGS 568
           K I+ + SPVG ++L  KF+PSCIMHPDTYLNKV+LGS
Sbjct: 121 KGIEDSQSPVGQVILGRKFSPSCIMHPDTYLNKVILGS 158


>ref|XP_004152858.1| PREDICTED: uncharacterized WD repeat-containing protein
           C1672.07-like [Cucumis sativus]
          Length = 891

 Score =  265 bits (678), Expect = 3e-69
 Identities = 125/158 (79%), Positives = 142/158 (89%)
 Frame = +2

Query: 95  MGIFEPFRAIGYITSSVPFSVYRLGTETFVTVSIGKAWQIYNCAKLTLVLAGPQLPKKIR 274
           MGIFEP+RAIGYIT+SVPFSV RLGTETFVTVS+GKA+Q+YNCAKL LVL GPQLPKKIR
Sbjct: 1   MGIFEPYRAIGYITNSVPFSVQRLGTETFVTVSVGKAFQVYNCAKLNLVLVGPQLPKKIR 60

Query: 275 ALASYRDYTFAAYGNDIAVFKRAHQVATWSRHSSKVNQLLLFGEHILSVDVEGNIFTWAF 454
           ALASYR+YTFAAYG+DIAVFKRAHQVA WS H +KVN LLLFG+HILSVD+ GN+F W F
Sbjct: 61  ALASYREYTFAAYGSDIAVFKRAHQVANWSSHKAKVNLLLLFGDHILSVDINGNMFMWPF 120

Query: 455 KEIDQNPSPVGHILLDGKFTPSCIMHPDTYLNKVLLGS 568
           K I+ + SPVG ++L  KF+PSCIMHPDTYLNKV+LGS
Sbjct: 121 KGIEDSQSPVGQVILGRKFSPSCIMHPDTYLNKVILGS 158


>ref|XP_002874820.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320657|gb|EFH51079.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 911

 Score =  265 bits (677), Expect = 4e-69
 Identities = 126/158 (79%), Positives = 146/158 (92%)
 Frame = +2

Query: 95  MGIFEPFRAIGYITSSVPFSVYRLGTETFVTVSIGKAWQIYNCAKLTLVLAGPQLPKKIR 274
           MGIFEPFRAIGYITS+VPFSV RLGTETFVTVS+GKA+QIYNCAKL LV+  PQLPKKIR
Sbjct: 1   MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAFQIYNCAKLNLVIISPQLPKKIR 60

Query: 275 ALASYRDYTFAAYGNDIAVFKRAHQVATWSRHSSKVNQLLLFGEHILSVDVEGNIFTWAF 454
           ALASYRDYTFAA+GN+IAVFKRAHQVATWS+H +KV+ LLLFGEH+LS+DVEGN+F WAF
Sbjct: 61  ALASYRDYTFAAFGNEIAVFKRAHQVATWSKHVAKVDLLLLFGEHVLSLDVEGNMFIWAF 120

Query: 455 KEIDQNPSPVGHILLDGKFTPSCIMHPDTYLNKVLLGS 568
           K I+++ SP+G++ L GKFTPS I+HPDTYLNKVL+GS
Sbjct: 121 KGIEEHLSPIGNLQLTGKFTPSSIVHPDTYLNKVLVGS 158


>ref|XP_002534411.1| WD-repeat protein, putative [Ricinus communis]
           gi|223525346|gb|EEF27972.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 906

 Score =  263 bits (672), Expect = 1e-68
 Identities = 123/158 (77%), Positives = 141/158 (89%)
 Frame = +2

Query: 95  MGIFEPFRAIGYITSSVPFSVYRLGTETFVTVSIGKAWQIYNCAKLTLVLAGPQLPKKIR 274
           MGIFEPFRAIGYIT+SVPFSV RLGTETFVTVS+GKA+Q+YNCAKL LVL  PQLP KIR
Sbjct: 1   MGIFEPFRAIGYITTSVPFSVQRLGTETFVTVSVGKAFQVYNCAKLNLVLVSPQLPHKIR 60

Query: 275 ALASYRDYTFAAYGNDIAVFKRAHQVATWSRHSSKVNQLLLFGEHILSVDVEGNIFTWAF 454
           ALASYRD+TFAAY N IAVFKR+ QVATWSRHS+KVN LLLFG+HI+SVDV GN+F W F
Sbjct: 61  ALASYRDFTFAAYANHIAVFKRSQQVATWSRHSAKVNLLLLFGDHIISVDVNGNMFIWGF 120

Query: 455 KEIDQNPSPVGHILLDGKFTPSCIMHPDTYLNKVLLGS 568
           K I+ N +P+GHI+LD  FTP+C+MHPDTYLNKV++GS
Sbjct: 121 KGIENNLAPIGHIMLDNNFTPTCLMHPDTYLNKVVVGS 158


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