BLASTX nr result

ID: Bupleurum21_contig00004905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004905
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523346.1| conserved hypothetical protein [Ricinus comm...   251   4e-65
ref|XP_002301410.1| predicted protein [Populus trichocarpa] gi|2...   243   2e-62
ref|XP_003554767.1| PREDICTED: uncharacterized membrane protein ...   241   4e-62
ref|XP_004133813.1| PREDICTED: uncharacterized protein LOC101209...   235   3e-60
ref|XP_002876638.1| hypothetical protein ARALYDRAFT_907735 [Arab...   235   4e-60

>ref|XP_002523346.1| conserved hypothetical protein [Ricinus communis]
           gi|223537434|gb|EEF39062.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 288

 Score =  251 bits (642), Expect = 4e-65
 Identities = 129/184 (70%), Positives = 150/184 (81%), Gaps = 8/184 (4%)
 Frame = -2

Query: 529 PFSAFVPILQKIKSFAKSSS---MSRLDSVLE----GCSDSD-TVLQNGGFGVALLSVTA 374
           P    VP+LQ++K  A S +   +SRL +  E      +D D   LQNG FGVALLS+T+
Sbjct: 73  PLWVLVPVLQRVKFIAFSQTKRWVSRLQAYSEESEKAMNDYDGNYLQNGAFGVALLSITS 132

Query: 373 NAKVKISPYVATLAANPTFVSGFFAWLIAQSMKLFLHFLFERKWDLRILCSSGGMPSSHS 194
           NAKVKISP+V+TLAANPTF+SG  AW +AQS K+ L+F  ERKWDLR+L +SGGMPSSHS
Sbjct: 133 NAKVKISPFVSTLAANPTFISGLLAWFVAQSTKVILNFFVERKWDLRLLFASGGMPSSHS 192

Query: 193 ALCTALTASVAICHGVADSLFPVCLGFTLIVMYDAIGVRRHAGMQAQVLNLIVEDLFQGH 14
           ALCTALT SVA+CHGVADSLFPVCLGF+LIVMYDAIGVRRHAGMQA+VLN+IVEDLFQGH
Sbjct: 193 ALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQGH 252

Query: 13  PISQ 2
           PISQ
Sbjct: 253 PISQ 256


>ref|XP_002301410.1| predicted protein [Populus trichocarpa] gi|222843136|gb|EEE80683.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  243 bits (619), Expect = 2e-62
 Identities = 116/137 (84%), Positives = 129/137 (94%)
 Frame = -2

Query: 412 NGGFGVALLSVTANAKVKISPYVATLAANPTFVSGFFAWLIAQSMKLFLHFLFERKWDLR 233
           NG FG+ALLS+T++AKVKISP+VATLAANPTF+SG FAW IAQSMK+FL+F  ERKWDLR
Sbjct: 3   NGAFGLALLSITSHAKVKISPFVATLAANPTFISGLFAWFIAQSMKVFLNFFVERKWDLR 62

Query: 232 ILCSSGGMPSSHSALCTALTASVAICHGVADSLFPVCLGFTLIVMYDAIGVRRHAGMQAQ 53
           +L +SGGMPSSHSALCTALT SVA CHGVADSLFPVCLGF+LIVMYDAIGVRRHAGMQA+
Sbjct: 63  LLFASGGMPSSHSALCTALTTSVAFCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAE 122

Query: 52  VLNLIVEDLFQGHPISQ 2
           VLN+IVEDLFQGHPISQ
Sbjct: 123 VLNMIVEDLFQGHPISQ 139


>ref|XP_003554767.1| PREDICTED: uncharacterized membrane protein yuiD-like [Glycine max]
          Length = 214

 Score =  241 bits (616), Expect = 4e-62
 Identities = 118/137 (86%), Positives = 129/137 (94%)
 Frame = -2

Query: 412 NGGFGVALLSVTANAKVKISPYVATLAANPTFVSGFFAWLIAQSMKLFLHFLFERKWDLR 233
           +GG GVALLSVTANAK++ISP+VATLAANPTFVSG  AWLIAQSMK+FL+F  ERKWDLR
Sbjct: 42  HGGLGVALLSVTANAKLRISPFVATLAANPTFVSGLLAWLIAQSMKVFLNFFMERKWDLR 101

Query: 232 ILCSSGGMPSSHSALCTALTASVAICHGVADSLFPVCLGFTLIVMYDAIGVRRHAGMQAQ 53
           +L +SGGMPSSHSALCTAL+ SVAICHGVADSLFPVCLGF+LIVMYDAIGVRRHAGMQAQ
Sbjct: 102 LLFASGGMPSSHSALCTALSTSVAICHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAQ 161

Query: 52  VLNLIVEDLFQGHPISQ 2
           VLNLIV DLFQGHPIS+
Sbjct: 162 VLNLIVADLFQGHPISE 178


>ref|XP_004133813.1| PREDICTED: uncharacterized protein LOC101209825 [Cucumis sativus]
          Length = 284

 Score =  235 bits (600), Expect = 3e-60
 Identities = 121/178 (67%), Positives = 140/178 (78%), Gaps = 3/178 (1%)
 Frame = -2

Query: 526 FSAFVPILQKIKSFAKSSSMSRLDSVLEGCSD---SDTVLQNGGFGVALLSVTANAKVKI 356
           F   VP+LQ IK    S +  +  SV EG  +   +   LQ+G  G ALLS+TA AK +I
Sbjct: 72  FWVLVPVLQSIKGVILSKT-HKAQSVSEGFVNGGLNGNYLQSGSVGTALLSITATAKHRI 130

Query: 355 SPYVATLAANPTFVSGFFAWLIAQSMKLFLHFLFERKWDLRILCSSGGMPSSHSALCTAL 176
           SP+VATLA NPTFVSG FAW  AQS K+ L+F  ERKWDL+I+ + GGMPSSHSALCTAL
Sbjct: 131 SPFVATLATNPTFVSGLFAWFFAQSTKVLLNFFVERKWDLKIMFACGGMPSSHSALCTAL 190

Query: 175 TASVAICHGVADSLFPVCLGFTLIVMYDAIGVRRHAGMQAQVLNLIVEDLFQGHPISQ 2
           T SVA+CHGVADSLFPVCLGF+LIVMYDAIGVRRHAGMQA+VLNLIVEDLF+GHPIS+
Sbjct: 191 TTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNLIVEDLFEGHPISK 248


>ref|XP_002876638.1| hypothetical protein ARALYDRAFT_907735 [Arabidopsis lyrata subsp.
           lyrata] gi|297322476|gb|EFH52897.1| hypothetical protein
           ARALYDRAFT_907735 [Arabidopsis lyrata subsp. lyrata]
          Length = 285

 Score =  235 bits (599), Expect = 4e-60
 Identities = 120/186 (64%), Positives = 141/186 (75%), Gaps = 8/186 (4%)
 Frame = -2

Query: 535 IKPFSAFVPILQKIKSFAKSSS---MSRL-----DSVLEGCSDSDTVLQNGGFGVALLSV 380
           + PF    PI++ IK    S S   MSRL     D+       +  +  NGG G+ALLSV
Sbjct: 64  LNPFCVLRPIIRTIKGLVSSQSRLWMSRLRAYRDDTAAFSEDFAGDLKHNGGLGIALLSV 123

Query: 379 TANAKVKISPYVATLAANPTFVSGFFAWLIAQSMKLFLHFLFERKWDLRILCSSGGMPSS 200
           TA+AK+KISP+VATL+ANPTFVS   AW  AQS K+ ++F  ERKWD R+L +SGGMPSS
Sbjct: 124 TASAKIKISPFVATLSANPTFVSAVVAWFFAQSSKMVINFFIERKWDFRLLYASGGMPSS 183

Query: 199 HSALCTALTASVAICHGVADSLFPVCLGFTLIVMYDAIGVRRHAGMQAQVLNLIVEDLFQ 20
           HSALC ALT SVA+CHGVADSLFPVCLGF+LIVMYDAIGVRRHAGMQA+VLNLI+ DLF+
Sbjct: 184 HSALCMALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNLIIRDLFE 243

Query: 19  GHPISQ 2
           GHPISQ
Sbjct: 244 GHPISQ 249


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