BLASTX nr result

ID: Bupleurum21_contig00004887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004887
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283905.1| PREDICTED: protein RER1B [Vitis vinifera] gi...   223   2e-56
ref|XP_004148836.1| PREDICTED: protein RER1A-like isoform 2 [Cuc...   220   2e-55
ref|XP_004148835.1| PREDICTED: protein RER1A-like isoform 1 [Cuc...   220   2e-55
ref|XP_002313038.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
gb|ABK93662.1| unknown [Populus trichocarpa]                          216   2e-54

>ref|XP_002283905.1| PREDICTED: protein RER1B [Vitis vinifera]
           gi|297744409|emb|CBI37671.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  223 bits (569), Expect = 2e-56
 Identities = 109/157 (69%), Positives = 121/157 (77%)
 Frame = -2

Query: 473 PLNQWRHDVWKRFQFYLDKTTPHAVYRWVGTAVLASLYALRCYYVQGFYIVSXXXXXXXX 294
           P+ QW+ D  + FQ+YLDKTTPH VYRWVGT V+A++YALR YYVQGFY+VS        
Sbjct: 14  PVIQWKTDASRLFQYYLDKTTPHPVYRWVGTLVVAAIYALRVYYVQGFYVVSYGLGIYLL 73

Query: 293 XXXXXXLSPLVDPELEPSNGSLLPTKDSDEFKPFIRRLPEFKFWYAITKAFCVAFVMTFF 114
                 LSPLVDPELE SN +LLPTK SDEFKPFIRRLPEFKFWY+ITKAFCVAFV+TFF
Sbjct: 74  NLLIGFLSPLVDPELETSNEALLPTKGSDEFKPFIRRLPEFKFWYSITKAFCVAFVLTFF 133

Query: 113 SMFDVPVFWPIXXXXXXXXXXLTMKRQIMHMIKYKYV 3
           S FDVPVFWPI          LTMKRQI+HMIKYKYV
Sbjct: 134 SAFDVPVFWPILLCYWIVLFILTMKRQIVHMIKYKYV 170


>ref|XP_004148836.1| PREDICTED: protein RER1A-like isoform 2 [Cucumis sativus]
           gi|449507345|ref|XP_004163005.1| PREDICTED: protein
           RER1A-like isoform 2 [Cucumis sativus]
          Length = 194

 Score =  220 bits (560), Expect = 2e-55
 Identities = 103/157 (65%), Positives = 121/157 (77%)
 Frame = -2

Query: 473 PLNQWRHDVWKRFQFYLDKTTPHAVYRWVGTAVLASLYALRCYYVQGFYIVSXXXXXXXX 294
           PL+QW+HDV + +Q+YLDK TPHAVYRW+GT  + ++YALR +YVQGFYIVS        
Sbjct: 14  PLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQGFYIVSYGLGIYIL 73

Query: 293 XXXXXXLSPLVDPELEPSNGSLLPTKDSDEFKPFIRRLPEFKFWYAITKAFCVAFVMTFF 114
                 LSPLVDPE+E S+G LLPTK SDEF+PFIRRLPEFKFWY+ TKAFC+AFVMTFF
Sbjct: 74  NLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCIAFVMTFF 133

Query: 113 SMFDVPVFWPIXXXXXXXXXXLTMKRQIMHMIKYKYV 3
           S+FDVPVFWPI          LTM+RQI HMIKYKY+
Sbjct: 134 SIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYL 170


>ref|XP_004148835.1| PREDICTED: protein RER1A-like isoform 1 [Cucumis sativus]
           gi|449507341|ref|XP_004163004.1| PREDICTED: protein
           RER1A-like isoform 1 [Cucumis sativus]
          Length = 232

 Score =  220 bits (560), Expect = 2e-55
 Identities = 103/157 (65%), Positives = 121/157 (77%)
 Frame = -2

Query: 473 PLNQWRHDVWKRFQFYLDKTTPHAVYRWVGTAVLASLYALRCYYVQGFYIVSXXXXXXXX 294
           PL+QW+HDV + +Q+YLDK TPHAVYRW+GT  + ++YALR +YVQGFYIVS        
Sbjct: 14  PLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQGFYIVSYGLGIYIL 73

Query: 293 XXXXXXLSPLVDPELEPSNGSLLPTKDSDEFKPFIRRLPEFKFWYAITKAFCVAFVMTFF 114
                 LSPLVDPE+E S+G LLPTK SDEF+PFIRRLPEFKFWY+ TKAFC+AFVMTFF
Sbjct: 74  NLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCIAFVMTFF 133

Query: 113 SMFDVPVFWPIXXXXXXXXXXLTMKRQIMHMIKYKYV 3
           S+FDVPVFWPI          LTM+RQI HMIKYKY+
Sbjct: 134 SIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYL 170


>ref|XP_002313038.1| predicted protein [Populus trichocarpa] gi|222849446|gb|EEE86993.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  216 bits (551), Expect = 2e-54
 Identities = 99/157 (63%), Positives = 120/157 (76%)
 Frame = -2

Query: 473 PLNQWRHDVWKRFQFYLDKTTPHAVYRWVGTAVLASLYALRCYYVQGFYIVSXXXXXXXX 294
           P+ QW +DVW+ +Q+YLDK+TPH V+RW+GT V+ ++Y LR YYVQGFYI++        
Sbjct: 3   PVAQWGNDVWRMYQYYLDKSTPHTVHRWIGTFVVMAIYCLRVYYVQGFYIIAYGLGIYIL 62

Query: 293 XXXXXXLSPLVDPELEPSNGSLLPTKDSDEFKPFIRRLPEFKFWYAITKAFCVAFVMTFF 114
                 LSPLVDPE++PS+G LLPTK SDEFKPFIRRLPEFKFWY+ TKAF +AFVMTFF
Sbjct: 63  NLLIGFLSPLVDPEIDPSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFVIAFVMTFF 122

Query: 113 SMFDVPVFWPIXXXXXXXXXXLTMKRQIMHMIKYKYV 3
           SMFDVPVFWPI          LTM+RQI HMIK+KY+
Sbjct: 123 SMFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKFKYI 159


>gb|ABK93662.1| unknown [Populus trichocarpa]
          Length = 194

 Score =  216 bits (551), Expect = 2e-54
 Identities = 99/157 (63%), Positives = 120/157 (76%)
 Frame = -2

Query: 473 PLNQWRHDVWKRFQFYLDKTTPHAVYRWVGTAVLASLYALRCYYVQGFYIVSXXXXXXXX 294
           P+ QW +DVW+ +Q+YLDK+TPH V+RW+GT V+ ++Y LR YYVQGFYI++        
Sbjct: 14  PVAQWGNDVWRMYQYYLDKSTPHTVHRWIGTFVVMAIYCLRVYYVQGFYIIAYGLGIYIL 73

Query: 293 XXXXXXLSPLVDPELEPSNGSLLPTKDSDEFKPFIRRLPEFKFWYAITKAFCVAFVMTFF 114
                 LSPLVDPE++PS+G LLPTK SDEFKPFIRRLPEFKFWY+ TKAF +AFVMTFF
Sbjct: 74  NLLIGFLSPLVDPEIDPSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFVIAFVMTFF 133

Query: 113 SMFDVPVFWPIXXXXXXXXXXLTMKRQIMHMIKYKYV 3
           SMFDVPVFWPI          LTM+RQI HMIK+KY+
Sbjct: 134 SMFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKFKYI 170


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