BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004869
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   160   3e-37
ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   156   4e-36
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   148   1e-33
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   141   1e-31
ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containi...   134   3e-29

>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  160 bits (405), Expect = 3e-37
 Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 3/202 (1%)
 Frame = -1

Query: 714 KFVLRVIETPDIPGANLIGFVRLVLEKDKLAITTPVVEWLVSMI-SIERKKNSAFAXXXX 538
           +FV++V+ETP + G NLI F +  ++K  L++TT  ++ LVS I S E ++ +A+A    
Sbjct: 61  EFVVKVLETPHVLGENLIRFFKWAMKKQDLSVTTRAIDVLVSSICSSELRRKNAYALWDL 120

Query: 537 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--CFEVFNKFEELNCVPNAESFYLAIETLC 364
                                             EVF+K ++  CVP++E++Y  IE LC
Sbjct: 121 VREIGEKNEGLVSVGSLNQLIALLSKLGKGKAALEVFDKSKDFGCVPDSETYYYTIEALC 180

Query: 363 RRSIYQWAVSVCETMVDRGSLPDSEKVGRIISCLCKGQKAKAAHDVYLCAKKQDKSPPRS 184
           RRS Y WA  VCE M+D+G LPDSEK+G+II   CKG KAK AH VYL AK++ K PP+ 
Sbjct: 181 RRSFYDWAWIVCEKMLDQGPLPDSEKIGKIICWFCKGSKAKDAHKVYLLAKEKSKCPPKP 240

Query: 183 SFNMLISSLCREDSNVHLALEM 118
           +   LI SLCR+D  V+LALEM
Sbjct: 241 ALYFLIGSLCRDDGTVNLALEM 262


>ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g02650, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score =  156 bits (395), Expect = 4e-36
 Identities = 86/201 (42%), Positives = 116/201 (57%), Gaps = 2/201 (0%)
 Frame = -1

Query: 714 KFVLRVIETPDIPGANLIGFVRLVLEKDKLAITTPVVEWLVSMI--SIERKKNSAFAXXX 541
           +FV+RV+ETP +P  NLIGF +   +    ++TT  V+ LV  +  S+ RK   +     
Sbjct: 151 EFVVRVLETPFVPANNLIGFFKWSWKNPGFSVTTRAVDALVRAVCQSVRRKDTYSLWDLV 210

Query: 540 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACFEVFNKFEELNCVPNAESFYLAIETLCR 361
                                         A  EVFN F E  C PNA+S+Y  IE LCR
Sbjct: 211 KEIGEKENGVLNVGILNELIAQFAKLGKGKAGLEVFNAFGEYGCEPNADSYYFTIEALCR 270

Query: 360 RSIYQWAVSVCETMVDRGSLPDSEKVGRIISCLCKGQKAKAAHDVYLCAKKQDKSPPRSS 181
           RSI+ WA+SVCE M++  SLPDSEKV  IIS  CKG+K K A+ VYL AK+++K PP+++
Sbjct: 271 RSIFDWALSVCEKMLNASSLPDSEKVWNIISWFCKGRKVKDAYLVYLLAKEKNKYPPKTT 330

Query: 180 FNMLISSLCREDSNVHLALEM 118
            N LI+SLCRED  + +A+EM
Sbjct: 331 VNFLIASLCREDGTISMAVEM 351


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
           gi|449477884|ref|XP_004155152.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  148 bits (374), Expect = 1e-33
 Identities = 85/201 (42%), Positives = 111/201 (55%), Gaps = 3/201 (1%)
 Frame = -1

Query: 711 FVLRVIETPDIPGANLIGFVRLVLEKD-KLAITTPVVEWLVSMISIERKKNSAFAXXXXX 535
           FVL+VIETP I G NLI F R  +    +  ++TPVV+ LV ++    ++  A++     
Sbjct: 64  FVLKVIETPHILGENLIRFFRWAVNSHPEFEVSTPVVDVLVRVVCANLRQRVAYSLWELI 123

Query: 534 XXXXXXXXXXXXXXXXXXXXXXXXXXXXA--CFEVFNKFEELNCVPNAESFYLAIETLCR 361
                                            EV N +E L CVPNAES+Y  +E LCR
Sbjct: 124 KEIGGKQTSLLNAEILNQLIAFFSKLGKGKAALEVLNSYEVLGCVPNAESYYFTVEALCR 183

Query: 360 RSIYQWAVSVCETMVDRGSLPDSEKVGRIISCLCKGQKAKAAHDVYLCAKKQDKSPPRSS 181
           RS Y  A  VCE M+D GS+P+S +VG+IIS  CKG KAK AH VYL AK++  + P+  
Sbjct: 184 RSSYDLAWPVCEKMLDSGSMPESNRVGKIISLFCKGNKAKNAHSVYLLAKEKHVNLPQCY 243

Query: 180 FNMLISSLCREDSNVHLALEM 118
            N+LI SLCR+D  V LALEM
Sbjct: 244 MNILIHSLCRDDETVKLALEM 264


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  141 bits (356), Expect = 1e-31
 Identities = 80/200 (40%), Positives = 112/200 (56%), Gaps = 2/200 (1%)
 Frame = -1

Query: 711 FVLRVIETPDIPGANLIGFVRLVLEKDKLAITTPVVEWLVSMISIERKKNSAFAXXXXXX 532
           F+++V+ETP I G NLI F    +++  + +TT +V  LV  I  E +K  A+A      
Sbjct: 171 FIVKVLETPLIVGDNLIKFFNWAIKQPDINVTTRLVHPLVRAICSELRKKDAYALWDLVK 230

Query: 531 XXXXXXXXXXXXXXXXXXXXXXXXXXXA--CFEVFNKFEELNCVPNAESFYLAIETLCRR 358
                                          FEVFNKF +  CVP++E+++  IE LCRR
Sbjct: 231 DIGEEENTVLNVDLLNQLIALFSKLGKGKAAFEVFNKFGDFGCVPDSETYHYTIEALCRR 290

Query: 357 SIYQWAVSVCETMVDRGSLPDSEKVGRIISCLCKGQKAKAAHDVYLCAKKQDKSPPRSSF 178
           SI+ WA SV E M+   +LPD+EK+G+II   CKG KA  A+ VYL AK+++K PP+ S 
Sbjct: 291 SIFDWASSVREKMLRAEALPDTEKIGKIICWFCKGDKANDAYLVYLLAKEKNKYPPQPSV 350

Query: 177 NMLISSLCREDSNVHLALEM 118
           N LI  LC+++  V LALEM
Sbjct: 351 NFLIGLLCQKNETVKLALEM 370


>ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like isoform 1 [Glycine max]
           gi|356556346|ref|XP_003546487.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 538

 Score =  134 bits (336), Expect = 3e-29
 Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 4/203 (1%)
 Frame = -1

Query: 714 KFVLRVIETPDIPGANLIGFVRLVLEKDKLAITTPVVEWLVSMI--SIERKKNSAFAXXX 541
           + V ++ ETP +   NLI F      +  L +TTP+VE LV  I  +  RKK   ++   
Sbjct: 121 QLVTKITETPFVLSENLIRFFWWAWSERSLGVTTPMVESLVLAICGNDVRKKEVVYSLWD 180

Query: 540 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--CFEVFNKFEELNCVPNAESFYLAIETL 367
                                              EVFNKFE  +CVP+A+++Y  IE L
Sbjct: 181 LVKEIGEKESGILNVKILNELISSFLRLGKGKAALEVFNKFEAFHCVPDADTYYFTIEAL 240

Query: 366 CRRSIYQWAVSVCETMVDRGSLPDSEKVGRIISCLCKGQKAKAAHDVYLCAKKQDKSPPR 187
           CRR    WA  VC+ MVD   LPD EKVG I+S LCKG+KAK AH VY+ A ++ K PP 
Sbjct: 241 CRRRALDWACGVCQKMVDAQILPDGEKVGAILSWLCKGKKAKEAHGVYVVATEKGKQPPV 300

Query: 186 SSFNMLISSLCREDSNVHLALEM 118
           +  + L+  LC ED  V  ALEM
Sbjct: 301 NVVSFLVVKLCGEDETVKFALEM 323