BLASTX nr result

ID: Bupleurum21_contig00004822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004822
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271041.2| PREDICTED: uncharacterized protein LOC100264...   114   8e-24
emb|CBI35722.3| unnamed protein product [Vitis vinifera]              114   8e-24
emb|CAN72958.1| hypothetical protein VITISV_010788 [Vitis vinifera]   114   8e-24
ref|NP_001234279.1| anti-PCD protein-like [Solanum lycopersicum]...   113   2e-23
ref|XP_002327630.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22

>ref|XP_002271041.2| PREDICTED: uncharacterized protein LOC100264333 [Vitis vinifera]
          Length = 298

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/99 (57%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
 Frame = -1

Query: 299 WGPQLGLLRLSCL-SNIPDKDAILEENDVKDDSNFVASISSYNWCAGLGGLGFLETAYLT 123
           WG  + +L L CL    PD       +D    S+   SIS+Y+WCAGLGGLGFLET YLT
Sbjct: 36  WGRGVLMLPLKCLPKQTPD-------SDTASSSSSSPSISAYSWCAGLGGLGFLETTYLT 88

Query: 122 FLKLTNSDAFCPIGSSSCTSILNSHYSLLFGVPLSLIGM 6
           +LKLTNSDAFCPIG  +C+ +LNS Y+ +FGVPL LIGM
Sbjct: 89  YLKLTNSDAFCPIGGGTCSDVLNSDYAAVFGVPLPLIGM 127


>emb|CBI35722.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/99 (57%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
 Frame = -1

Query: 299 WGPQLGLLRLSCL-SNIPDKDAILEENDVKDDSNFVASISSYNWCAGLGGLGFLETAYLT 123
           WG  + +L L CL    PD       +D    S+   SIS+Y+WCAGLGGLGFLET YLT
Sbjct: 36  WGRGVLMLPLKCLPKQTPD-------SDTASSSSSSPSISAYSWCAGLGGLGFLETTYLT 88

Query: 122 FLKLTNSDAFCPIGSSSCTSILNSHYSLLFGVPLSLIGM 6
           +LKLTNSDAFCPIG  +C+ +LNS Y+ +FGVPL LIGM
Sbjct: 89  YLKLTNSDAFCPIGGGTCSDVLNSDYAAVFGVPLPLIGM 127


>emb|CAN72958.1| hypothetical protein VITISV_010788 [Vitis vinifera]
          Length = 418

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/99 (57%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
 Frame = -1

Query: 299 WGPQLGLLRLSCL-SNIPDKDAILEENDVKDDSNFVASISSYNWCAGLGGLGFLETAYLT 123
           WG  + +L L CL    PD       +D    S+   SIS+Y+WCAGLGGLGFLET YLT
Sbjct: 93  WGRGVLMLPLKCLPKQTPD-------SDTASSSSSSPSISAYSWCAGLGGLGFLETTYLT 145

Query: 122 FLKLTNSDAFCPIGSSSCTSILNSHYSLLFGVPLSLIGM 6
           +LKLTNSDAFCPIG  +C+ +LNS Y+ +FGVPL LIGM
Sbjct: 146 YLKLTNSDAFCPIGGGTCSDVLNSDYAAVFGVPLPLIGM 184


>ref|NP_001234279.1| anti-PCD protein-like [Solanum lycopersicum]
           gi|76363955|gb|ABA41597.1| putative anti-PCD protein
           [Solanum lycopersicum]
          Length = 243

 Score =  113 bits (282), Expect = 2e-23
 Identities = 65/124 (52%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
 Frame = -1

Query: 356 TASSHLFPTPLRS----THLKSVWGPQLGLLRLSCLSN-IPDKDAILEENDVKDDSNFVA 192
           T +SHL P+   S      LK     +L LLR++C S  + D +   E   V  D+    
Sbjct: 14  TQTSHLLPSRSNSISSLVQLKRDSVRRLLLLRVNCSSRQVGDAETESESKVVLPDTPADT 73

Query: 191 SISSYNWCAGLGGLGFLETAYLTFLKLTNSDAFCPIG-SSSCTSILNSHYSLLFGVPLSL 15
            IS+YNWCA LGG+GFLET+YLTFLKLTNS AFCP+G  +SC  ILNS YS +FGVPL L
Sbjct: 74  GISAYNWCAALGGIGFLETSYLTFLKLTNSAAFCPVGDGASCGDILNSSYSAVFGVPLPL 133

Query: 14  IGMI 3
           IGM+
Sbjct: 134 IGMV 137


>ref|XP_002327630.1| predicted protein [Populus trichocarpa] gi|222836715|gb|EEE75108.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  109 bits (273), Expect = 2e-22
 Identities = 48/64 (75%), Positives = 58/64 (90%)
 Frame = -1

Query: 194 ASISSYNWCAGLGGLGFLETAYLTFLKLTNSDAFCPIGSSSCTSILNSHYSLLFGVPLSL 15
           +S+S+YNWCAGLGG+GFLETAYLTFLKLTNSDAFCPIG  +C  +L+S Y+++FGVPL L
Sbjct: 31  SSVSTYNWCAGLGGVGFLETAYLTFLKLTNSDAFCPIGGGNCGDVLSSDYAVVFGVPLPL 90

Query: 14  IGMI 3
           IGMI
Sbjct: 91  IGMI 94


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