BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004820
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40152.3| unnamed protein product [Vitis vinifera]              104   1e-20
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   104   1e-20
emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera]   104   1e-20
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...    94   1e-17
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    94   1e-17

>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  104 bits (259), Expect = 1e-20
 Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
 Frame = +1

Query: 1    DKVVKMGAGMDYIMINKHSAH-QVRCLHLVRTDGVTEDFSYWKCMENFMKEKFPDRAESF 177
            DK VKMG G+DY+M+++HS+  + RC ++V TDG  EDFSY KC+ENF+KEK+PD AE+F
Sbjct: 1790 DKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETF 1849

Query: 178  NAKYFRRNNPQPRPGWNKERNT-PEXXXXXXXXXXXXXXXXDDEASVPKPTGTENK 342
              KYFRR    PR G N+ER+  PE                 +++ VP+ TG+EN+
Sbjct: 1850 IGKYFRR----PRAGGNRERSVIPEDGGNR------------EQSVVPEETGSENR 1889


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  104 bits (259), Expect = 1e-20
 Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
 Frame = +1

Query: 1    DKVVKMGAGMDYIMINKHSAH-QVRCLHLVRTDGVTEDFSYWKCMENFMKEKFPDRAESF 177
            DK VKMG G+DY+M+++HS+  + RC ++V TDG  EDFSY KC+ENF+KEK+PD AE+F
Sbjct: 1730 DKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETF 1789

Query: 178  NAKYFRRNNPQPRPGWNKERNT-PEXXXXXXXXXXXXXXXXDDEASVPKPTGTENK 342
              KYFRR    PR G N+ER+  PE                 +++ VP+ TG+EN+
Sbjct: 1790 IGKYFRR----PRAGGNRERSVIPEDGGNR------------EQSVVPEETGSENR 1829


>emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera]
          Length = 1081

 Score =  104 bits (259), Expect = 1e-20
 Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
 Frame = +1

Query: 1    DKVVKMGAGMDYIMINKHSAH-QVRCLHLVRTDGVTEDFSYWKCMENFMKEKFPDRAESF 177
            DK VKMG G+DY+M+++HS+  + RC ++V TDG  EDFSY KC+ENF+KEK+PD AE+F
Sbjct: 981  DKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETF 1040

Query: 178  NAKYFRRNNPQPRPGWNKERNT-PEXXXXXXXXXXXXXXXXDDEASVPKPTGTENK 342
              KYFRR    PR G N+ER+  PE                 +++ VP+ TG+EN+
Sbjct: 1041 IGKYFRR----PRAGGNRERSVIPEDGGNR------------EQSVVPEETGSENR 1080


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/81 (55%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1    DKVVKMGAGMDYIMINKHSAHQV-RCLHLVRTDGVTEDFSYWKCMENFMKEKFPDRAESF 177
            DK  KMGAG+D+ M+++HS+ Q  RC ++V TDG  EDFSY KC++NF+K K+PD AE F
Sbjct: 1855 DKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMF 1914

Query: 178  NAKYFRRNNPQPRPGWNKERN 240
             AKYFR+    PRP  N++RN
Sbjct: 1915 VAKYFRK----PRPNRNRDRN 1931


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/81 (55%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1    DKVVKMGAGMDYIMINKHSAHQV-RCLHLVRTDGVTEDFSYWKCMENFMKEKFPDRAESF 177
            DK  KMGAG+D+ M+++HS+ Q  RC ++V TDG  EDFSY KC++NF+K K+PD AE F
Sbjct: 1915 DKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMF 1974

Query: 178  NAKYFRRNNPQPRPGWNKERN 240
             AKYFR+    PRP  N++RN
Sbjct: 1975 VAKYFRK----PRPNRNRDRN 1991