BLASTX nr result
ID: Bupleurum21_contig00004818
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00004818
(1397 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_188718.1| leucine-rich repeat-containing protein [Arabido... 525 e-151
ref|XP_002883270.1| leucine-rich repeat family protein [Arabidop... 524 e-151
dbj|BAJ33628.1| unnamed protein product [Thellungiella halophila] 522 e-151
ref|NP_001240925.1| DNA-damage-repair/toleration protein DRT100-... 522 e-150
gb|ABD46739.1| leucine-rich repeat protein [Nicotiana tabacum] 521 e-149
>ref|NP_188718.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|9294409|dbj|BAB02490.1| polygalacturonase
inhibitor-like protein [Arabidopsis thaliana]
gi|17380932|gb|AAL36278.1| unknown protein [Arabidopsis
thaliana] gi|21436417|gb|AAM51409.1| unknown protein
[Arabidopsis thaliana] gi|332642907|gb|AEE76428.1|
leucine-rich repeat-containing protein [Arabidopsis
thaliana]
Length = 365
Score = 525 bits (1351), Expect(2) = e-151
Identities = 249/340 (73%), Positives = 295/340 (86%)
Frame = -3
Query: 1359 VVIVLATVSAIICCPPSEREALLAFKASLHEPYLGIFKSWTGTDCCNKWYGVSCDSTNHR 1180
V+++L +S+ CCPPS+R ALLAF+++LHEPYLGIF SWTG DCC+ WYG+SCDS HR
Sbjct: 7 VLLLLLLISSATCCPPSDRRALLAFRSALHEPYLGIFNSWTGQDCCHNWYGISCDSLTHR 66
Query: 1179 VADINLRGESEDPIFQKAHRTGYMTGTISPAICKLTWLSSIIIADWKGITGPIPDCISYL 1000
VADINLRGESEDPIF++AHRTGYMTG IS +IC+LT LS+I IADWKGI+G IP CI+ L
Sbjct: 67 VADINLRGESEDPIFERAHRTGYMTGHISASICELTRLSAITIADWKGISGEIPKCITRL 126
Query: 999 PYLRILDLIGNKFTGQLPKDIGRLSRLTVLNVADNSLSGWIPRSISNLSSLMHLDLRNNQ 820
P+LR LDLIGN+ +G +P DIGRL+RL VLNVADN +SG IP+S++NLSSLMHLDLRNN
Sbjct: 127 PFLRTLDLIGNQISGGIPYDIGRLNRLAVLNVADNRISGSIPKSLTNLSSLMHLDLRNNL 186
Query: 819 ISGPLPRDIGKLRMMSRALLSRNRITGPIPNSISYIYRLSDLDLSLNQISGTIPPSLGKM 640
ISG +P D+G+L+M+SRALLS NRITG IP S++ IYRL+D+DLS NQ+ GTIPPSLG+M
Sbjct: 187 ISGVIPSDVGRLKMLSRALLSGNRITGRIPESLTNIYRLADVDLSGNQLYGTIPPSLGRM 246
Query: 639 GVLATLNLDGNKLTGPIPATLMNSGVSILNLSRNSLQGNIPDVFGPRSYFTAIDLSYNQL 460
VLATLNLDGNK++G IP TLM S V LNLSRN LQG IP+ FGPRSYFT +DLSYN L
Sbjct: 247 SVLATLNLDGNKISGEIPQTLMTSSVMNLNLSRNLLQGKIPEGFGPRSYFTVLDLSYNNL 306
Query: 459 KGPIPKSISGASYVGHLDLSHNHLCGRIPVGSPFDHLEAS 340
KGPIP+SISGAS++GHLDLSHNHLCGRIPVGSPFDHLEA+
Sbjct: 307 KGPIPRSISGASFIGHLDLSHNHLCGRIPVGSPFDHLEAA 346
Score = 38.5 bits (88), Expect(2) = e-151
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = -1
Query: 263 SFVYNDCLCGKPLRAC 216
SF++NDCLCGKPLRAC
Sbjct: 347 SFMFNDCLCGKPLRAC 362
>ref|XP_002883270.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329110|gb|EFH59529.1| leucine-rich repeat family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 524 bits (1350), Expect(2) = e-151
Identities = 250/340 (73%), Positives = 293/340 (86%)
Frame = -3
Query: 1359 VVIVLATVSAIICCPPSEREALLAFKASLHEPYLGIFKSWTGTDCCNKWYGVSCDSTNHR 1180
V++ L +S+ CCPPS+R ALLAF+++LHEPYLGIF SWTG DCC+ WYG+SCDS HR
Sbjct: 7 VLLFLLLISSATCCPPSDRRALLAFRSALHEPYLGIFNSWTGQDCCHNWYGISCDSLTHR 66
Query: 1179 VADINLRGESEDPIFQKAHRTGYMTGTISPAICKLTWLSSIIIADWKGITGPIPDCISYL 1000
VADINLRGESEDPIF++AHRTGYMTG IS +IC LT LS+I IADWKGI+G IP CI+ L
Sbjct: 67 VADINLRGESEDPIFERAHRTGYMTGHISASICDLTRLSAITIADWKGISGEIPKCITRL 126
Query: 999 PYLRILDLIGNKFTGQLPKDIGRLSRLTVLNVADNSLSGWIPRSISNLSSLMHLDLRNNQ 820
P+LR LDLIGN+ +G +P DIGRL+RL VLNVADN +SG IP+S++NLSSLMHLDLRNN
Sbjct: 127 PFLRTLDLIGNQISGGIPYDIGRLNRLAVLNVADNRISGSIPKSLTNLSSLMHLDLRNNL 186
Query: 819 ISGPLPRDIGKLRMMSRALLSRNRITGPIPNSISYIYRLSDLDLSLNQISGTIPPSLGKM 640
ISG +P D+G+L+M+SRALLS NRITG IP S+S IYRL+D+DLS NQ+ GTIPPSLG+M
Sbjct: 187 ISGVIPSDVGRLKMLSRALLSGNRITGRIPESLSNIYRLADVDLSGNQLYGTIPPSLGRM 246
Query: 639 GVLATLNLDGNKLTGPIPATLMNSGVSILNLSRNSLQGNIPDVFGPRSYFTAIDLSYNQL 460
VLATLNLDGNK++G IP TLM S V LNLSRN LQG IP+ FGPRSYFT +DLSYN L
Sbjct: 247 SVLATLNLDGNKISGEIPQTLMTSSVMNLNLSRNLLQGKIPEGFGPRSYFTVLDLSYNNL 306
Query: 459 KGPIPKSISGASYVGHLDLSHNHLCGRIPVGSPFDHLEAS 340
KGPIP+SISGAS++GHLDLSHNHLCGRIPVGSPFDHLEA+
Sbjct: 307 KGPIPRSISGASFIGHLDLSHNHLCGRIPVGSPFDHLEAA 346
Score = 38.5 bits (88), Expect(2) = e-151
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = -1
Query: 263 SFVYNDCLCGKPLRAC 216
SF++NDCLCGKPLRAC
Sbjct: 347 SFMFNDCLCGKPLRAC 362
>dbj|BAJ33628.1| unnamed protein product [Thellungiella halophila]
Length = 365
Score = 522 bits (1344), Expect(2) = e-151
Identities = 249/340 (73%), Positives = 290/340 (85%)
Frame = -3
Query: 1359 VVIVLATVSAIICCPPSEREALLAFKASLHEPYLGIFKSWTGTDCCNKWYGVSCDSTNHR 1180
++++L +S CCPPS+R ALLAF+++LHEPYLGIF SWTG DCC+ WYGVSCDS HR
Sbjct: 7 ILLLLLLISTATCCPPSDRRALLAFRSALHEPYLGIFNSWTGQDCCHNWYGVSCDSVTHR 66
Query: 1179 VADINLRGESEDPIFQKAHRTGYMTGTISPAICKLTWLSSIIIADWKGITGPIPDCISYL 1000
VADINLRGESEDPIF++AHRTG+MTG ISPAIC L LS+I IA WKGI+G IP CI+ L
Sbjct: 67 VADINLRGESEDPIFERAHRTGFMTGRISPAICNLPRLSAITIAGWKGISGEIPKCITRL 126
Query: 999 PYLRILDLIGNKFTGQLPKDIGRLSRLTVLNVADNSLSGWIPRSISNLSSLMHLDLRNNQ 820
P+LR LDLIGN+ +G +P DIGRL RL VLNVADN +SG IP+S++NLSSLMHLDLRNNQ
Sbjct: 127 PFLRTLDLIGNQISGGIPNDIGRLHRLAVLNVADNRISGPIPKSLTNLSSLMHLDLRNNQ 186
Query: 819 ISGPLPRDIGKLRMMSRALLSRNRITGPIPNSISYIYRLSDLDLSLNQISGTIPPSLGKM 640
ISG +P D G+L M+SRALLS NRITG IP S++ IYRL+D+DLS NQ+ GTIPPSLG+M
Sbjct: 187 ISGVIPPDFGRLTMLSRALLSGNRITGRIPESLTRIYRLADVDLSGNQLYGTIPPSLGRM 246
Query: 639 GVLATLNLDGNKLTGPIPATLMNSGVSILNLSRNSLQGNIPDVFGPRSYFTAIDLSYNQL 460
VLATLNLDGNK++G IP TLM S V LNLSRN LQG IP+ FGPRSYFT +DLSYN L
Sbjct: 247 AVLATLNLDGNKISGEIPQTLMTSSVMNLNLSRNLLQGKIPEGFGPRSYFTVLDLSYNNL 306
Query: 459 KGPIPKSISGASYVGHLDLSHNHLCGRIPVGSPFDHLEAS 340
KGPIP+SISGAS++GHLDLSHNHLCGRIPVGSPFDHLEA+
Sbjct: 307 KGPIPRSISGASFIGHLDLSHNHLCGRIPVGSPFDHLEAA 346
Score = 40.0 bits (92), Expect(2) = e-151
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -1
Query: 263 SFVYNDCLCGKPLRAC 216
SF+YNDCLCGKPLRAC
Sbjct: 347 SFMYNDCLCGKPLRAC 362
>ref|NP_001240925.1| DNA-damage-repair/toleration protein DRT100-like precursor [Glycine
max] gi|223452540|gb|ACM89597.1| leucine rich repeat
protein [Glycine max]
Length = 368
Score = 522 bits (1345), Expect(2) = e-150
Identities = 252/340 (74%), Positives = 291/340 (85%)
Frame = -3
Query: 1359 VVIVLATVSAIICCPPSEREALLAFKASLHEPYLGIFKSWTGTDCCNKWYGVSCDSTNHR 1180
+V+ +A S + CPPS+R ALLAFKA+LHEPYLGIF SWTG DCC+KWYGVSCD R
Sbjct: 12 LVLFMAMSSGVRSCPPSDRAALLAFKAALHEPYLGIFNSWTGADCCHKWYGVSCDQETRR 71
Query: 1179 VADINLRGESEDPIFQKAHRTGYMTGTISPAICKLTWLSSIIIADWKGITGPIPDCISYL 1000
VADINLRGESE+PIF++AHRTGYMTG ISPAICKL LSSI IADWKGI+G IP CI+ L
Sbjct: 72 VADINLRGESEEPIFERAHRTGYMTGYISPAICKLARLSSITIADWKGISGEIPRCITTL 131
Query: 999 PYLRILDLIGNKFTGQLPKDIGRLSRLTVLNVADNSLSGWIPRSISNLSSLMHLDLRNNQ 820
P+LRI+DLIGN+ +G +P IGRL RLTVLNVADN +SG IP S++NLSSLMHLDLRNN
Sbjct: 132 PFLRIVDLIGNRLSGSIPAGIGRLHRLTVLNVADNLISGTIPTSLANLSSLMHLDLRNNL 191
Query: 819 ISGPLPRDIGKLRMMSRALLSRNRITGPIPNSISYIYRLSDLDLSLNQISGTIPPSLGKM 640
SGP+PR+ G L M+SRALLS NR++G IP+S+S IYRL+DLDLS NQISG IP SLGKM
Sbjct: 192 FSGPIPRNFGSLSMLSRALLSGNRLSGAIPSSVSQIYRLADLDLSRNQISGPIPESLGKM 251
Query: 639 GVLATLNLDGNKLTGPIPATLMNSGVSILNLSRNSLQGNIPDVFGPRSYFTAIDLSYNQL 460
VL+TLNLD NKL+GPIP +L +SG+S LNLSRN+L+GNIPD FG RSYFTA+DLSYN L
Sbjct: 252 AVLSTLNLDMNKLSGPIPVSLFSSGISDLNLSRNALEGNIPDAFGVRSYFTALDLSYNNL 311
Query: 459 KGPIPKSISGASYVGHLDLSHNHLCGRIPVGSPFDHLEAS 340
KG IPKSIS ASY+GHLDLSHNHLCG+IP+GSPFDHLEAS
Sbjct: 312 KGAIPKSISSASYIGHLDLSHNHLCGKIPLGSPFDHLEAS 351
Score = 38.1 bits (87), Expect(2) = e-150
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -1
Query: 263 SFVYNDCLCGKPLRAC 216
SFVYNDCLCGKPL+ C
Sbjct: 352 SFVYNDCLCGKPLKPC 367
>gb|ABD46739.1| leucine-rich repeat protein [Nicotiana tabacum]
Length = 365
Score = 521 bits (1341), Expect(2) = e-149
Identities = 249/347 (71%), Positives = 295/347 (85%)
Frame = -3
Query: 1380 MTYFFFFVVIVLATVSAIICCPPSEREALLAFKASLHEPYLGIFKSWTGTDCCNKWYGVS 1201
M F + ++L +SA+ CPPS+R ALLAF+A+L+E LGIF +W G +CC+ WYGVS
Sbjct: 2 MGSFLYITTLLLGIISAVHSCPPSDRAALLAFRAALNESSLGIFNTWQGYECCHGWYGVS 61
Query: 1200 CDSTNHRVADINLRGESEDPIFQKAHRTGYMTGTISPAICKLTWLSSIIIADWKGITGPI 1021
CD HRVADINLRGESEDP+FQKAH+TGYMTGTISPAICKL LSS+ IADWKGITGPI
Sbjct: 62 CDQLTHRVADINLRGESEDPLFQKAHKTGYMTGTISPAICKLERLSSLTIADWKGITGPI 121
Query: 1020 PDCISYLPYLRILDLIGNKFTGQLPKDIGRLSRLTVLNVADNSLSGWIPRSISNLSSLMH 841
P C++ LP+LRI+DLIGNK TG++P +IGRLSRLTVLNVADN LSG IPRS++NLSSLMH
Sbjct: 122 PSCVTSLPFLRIIDLIGNKLTGEIPSEIGRLSRLTVLNVADNCLSGRIPRSLTNLSSLMH 181
Query: 840 LDLRNNQISGPLPRDIGKLRMMSRALLSRNRITGPIPNSISYIYRLSDLDLSLNQISGTI 661
LDLRNN+I G LP + GKLRM+SRALLS NR+ G IP SISYIYRLSDLDLSLN++SGTI
Sbjct: 182 LDLRNNRIFGTLPTNFGKLRMLSRALLSGNRLIGKIPYSISYIYRLSDLDLSLNKLSGTI 241
Query: 660 PPSLGKMGVLATLNLDGNKLTGPIPATLMNSGVSILNLSRNSLQGNIPDVFGPRSYFTAI 481
PPSLGKM VLATLNLDGN ++G IP TL+NS ++ILNLS+NS++G IPD F RSYF +
Sbjct: 242 PPSLGKMHVLATLNLDGNNISGTIPPTLINSRINILNLSKNSIEGYIPDSFDERSYFMVM 301
Query: 480 DLSYNQLKGPIPKSISGASYVGHLDLSHNHLCGRIPVGSPFDHLEAS 340
DLSYN+L+G IPKSIS A+++GH D+SHNHLCG+IP GSPFDHLEAS
Sbjct: 302 DLSYNKLRGKIPKSISSATFIGHFDVSHNHLCGQIPAGSPFDHLEAS 348
Score = 36.6 bits (83), Expect(2) = e-149
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 263 SFVYNDCLCGKPLRAC 216
SF YNDCLCGKPL+ C
Sbjct: 349 SFTYNDCLCGKPLKPC 364