BLASTX nr result

ID: Bupleurum21_contig00004813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004813
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39711.1| unknown [Lotus japonicus]                              306   1e-81
ref|XP_003533753.1| PREDICTED: WD-40 repeat-containing protein M...   306   2e-81
ref|XP_003533752.1| PREDICTED: WD-40 repeat-containing protein M...   306   2e-81
ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein M...   305   3e-81
ref|XP_003595171.1| Nucleosome/chromatin assembly factor group [...   304   7e-81

>gb|AFK39711.1| unknown [Lotus japonicus]
          Length = 283

 Score =  306 bits (785), Expect = 1e-81
 Identities = 144/198 (72%), Positives = 163/198 (82%), Gaps = 5/198 (2%)
 Frame = -3

Query: 592 GDDSCLILWDARTGFNPVIKVEKAHDADVHCVDWNPQDMNLILTGSADHSVCMFDRRNL- 416
           GDDSCLILWDAR G +PV++VEKAHDAD+HCVDWNP D NLILTGSAD+SV MFDRRNL 
Sbjct: 83  GDDSCLILWDARVGCSPVVRVEKAHDADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLT 142

Query: 415 --GI--PVHKFEDHKAAVLCVQWCPDKASVFGSSAEDGFLNIWDYEKVGKKVESGTRSLN 248
             G+  P+HKFE HKAAVLCVQW PDKASVFGSSAEDG LNIWDYEKVGKK+E   +S+N
Sbjct: 143 SNGVEAPIHKFEGHKAAVLCVQWSPDKASVFGSSAEDGLLNIWDYEKVGKKIERAGKSIN 202

Query: 247 SPPGLFFKHAGHRNKIVDFHWNAYDPWXXXXXXXXXXXXXXXXTMQIWRMSDLIYRPQED 68
           +PPGLFF+HAGHR+K+VDFHWNAYDPW                T+QIWRMSDLIYRP+E+
Sbjct: 203 TPPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEEE 262

Query: 67  VLAELQAFKSHVVECTSK 14
           VLAEL+ FK+HVV C SK
Sbjct: 263 VLAELEKFKAHVVACASK 280


>ref|XP_003533753.1| PREDICTED: WD-40 repeat-containing protein MSI4-like isoform 2
           [Glycine max]
          Length = 504

 Score =  306 bits (784), Expect = 2e-81
 Identities = 143/198 (72%), Positives = 162/198 (81%), Gaps = 5/198 (2%)
 Frame = -3

Query: 592 GDDSCLILWDARTGFNPVIKVEKAHDADVHCVDWNPQDMNLILTGSADHSVCMFDRRNL- 416
           GDDSCLILWDAR G +PV+KVEKAH+AD+HCVDWNP D NLILTGSAD+SV MFDRRNL 
Sbjct: 304 GDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLT 363

Query: 415 ----GIPVHKFEDHKAAVLCVQWCPDKASVFGSSAEDGFLNIWDYEKVGKKVESGTRSLN 248
               G P+HKFE HKAAVLCVQW PDK+SVFGSSAEDG LNIWDYEKVGKK+E   +S++
Sbjct: 364 TNGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERSGKSIS 423

Query: 247 SPPGLFFKHAGHRNKIVDFHWNAYDPWXXXXXXXXXXXXXXXXTMQIWRMSDLIYRPQED 68
           SPPGLFF+HAGHR+K+VDFHWNAYDPW                T+QIWRMSDLIYRP+++
Sbjct: 424 SPPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEDE 483

Query: 67  VLAELQAFKSHVVECTSK 14
           VLAEL+ FKSHVV C SK
Sbjct: 484 VLAELEKFKSHVVACASK 501


>ref|XP_003533752.1| PREDICTED: WD-40 repeat-containing protein MSI4-like isoform 1
           [Glycine max]
          Length = 513

 Score =  306 bits (784), Expect = 2e-81
 Identities = 143/198 (72%), Positives = 162/198 (81%), Gaps = 5/198 (2%)
 Frame = -3

Query: 592 GDDSCLILWDARTGFNPVIKVEKAHDADVHCVDWNPQDMNLILTGSADHSVCMFDRRNL- 416
           GDDSCLILWDAR G +PV+KVEKAH+AD+HCVDWNP D NLILTGSAD+SV MFDRRNL 
Sbjct: 313 GDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLT 372

Query: 415 ----GIPVHKFEDHKAAVLCVQWCPDKASVFGSSAEDGFLNIWDYEKVGKKVESGTRSLN 248
               G P+HKFE HKAAVLCVQW PDK+SVFGSSAEDG LNIWDYEKVGKK+E   +S++
Sbjct: 373 TNGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERSGKSIS 432

Query: 247 SPPGLFFKHAGHRNKIVDFHWNAYDPWXXXXXXXXXXXXXXXXTMQIWRMSDLIYRPQED 68
           SPPGLFF+HAGHR+K+VDFHWNAYDPW                T+QIWRMSDLIYRP+++
Sbjct: 433 SPPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEDE 492

Query: 67  VLAELQAFKSHVVECTSK 14
           VLAEL+ FKSHVV C SK
Sbjct: 493 VLAELEKFKSHVVACASK 510


>ref|XP_003546456.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Glycine max]
          Length = 508

 Score =  305 bits (782), Expect = 3e-81
 Identities = 143/198 (72%), Positives = 162/198 (81%), Gaps = 5/198 (2%)
 Frame = -3

Query: 592 GDDSCLILWDARTGFNPVIKVEKAHDADVHCVDWNPQDMNLILTGSADHSVCMFDRRNL- 416
           GDDSCLILWDAR G +PV+KVEKAH+AD+HCVDWNP D NLILTGSAD+SV MFDRRNL 
Sbjct: 308 GDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLT 367

Query: 415 ----GIPVHKFEDHKAAVLCVQWCPDKASVFGSSAEDGFLNIWDYEKVGKKVESGTRSLN 248
               G P+HKFE HKAAVLCVQW PDK+SVFGSSAEDG LNIWDYEKVGKK+E   +S++
Sbjct: 368 TNGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERTGKSIS 427

Query: 247 SPPGLFFKHAGHRNKIVDFHWNAYDPWXXXXXXXXXXXXXXXXTMQIWRMSDLIYRPQED 68
           SPPGLFF+HAGHR+K+VDFHWNAYDPW                T+QIWRMSDLIYRP+++
Sbjct: 428 SPPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEDE 487

Query: 67  VLAELQAFKSHVVECTSK 14
           VLAEL+ FKSHVV C SK
Sbjct: 488 VLAELEKFKSHVVACASK 505


>ref|XP_003595171.1| Nucleosome/chromatin assembly factor group [Medicago truncatula]
           gi|124360783|gb|ABN08755.1| WD40-like [Medicago
           truncatula] gi|217074306|gb|ACJ85513.1| unknown
           [Medicago truncatula] gi|355484219|gb|AES65422.1|
           Nucleosome/chromatin assembly factor group [Medicago
           truncatula]
          Length = 500

 Score =  304 bits (779), Expect = 7e-81
 Identities = 140/198 (70%), Positives = 162/198 (81%), Gaps = 5/198 (2%)
 Frame = -3

Query: 592 GDDSCLILWDARTGFNPVIKVEKAHDADVHCVDWNPQDMNLILTGSADHSVCMFDRRNL- 416
           GDDSCLILWDAR G +PV+KVEKAHDAD+HCVDWNP D NLILTGSAD+S+ MFDRRNL 
Sbjct: 300 GDDSCLILWDARVGSSPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNSIRMFDRRNLT 359

Query: 415 ----GIPVHKFEDHKAAVLCVQWCPDKASVFGSSAEDGFLNIWDYEKVGKKVESGTRSLN 248
               G P+HKFE HKAAVLCVQW PDK+SVFGSSAEDG LNIWDYEKVGKK+E   +++N
Sbjct: 360 SNGVGSPIHKFEAHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERAGKTIN 419

Query: 247 SPPGLFFKHAGHRNKIVDFHWNAYDPWXXXXXXXXXXXXXXXXTMQIWRMSDLIYRPQED 68
           SPPGLFF+HAGHR+K+VDFHWNA+DPW                T+QIWRMSDL+YRP+++
Sbjct: 420 SPPGLFFQHAGHRDKVVDFHWNAHDPWTLVSVSDDCESTGGGGTLQIWRMSDLLYRPEDE 479

Query: 67  VLAELQAFKSHVVECTSK 14
           VLAEL+ FKSHVV C +K
Sbjct: 480 VLAELEKFKSHVVACAAK 497


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