BLASTX nr result
ID: Bupleurum21_contig00004809
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00004809 (561 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216... 181 5e-44 ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262... 172 3e-41 ref|XP_002516840.1| serine/arginine rich splicing factor, putati... 171 6e-41 gb|ACU20250.1| unknown [Glycine max] 170 1e-40 ref|XP_002314444.1| predicted protein [Populus trichocarpa] gi|2... 169 3e-40 >ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus] gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus] Length = 248 Score = 181 bits (460), Expect = 5e-44 Identities = 89/110 (80%), Positives = 100/110 (90%), Gaps = 2/110 (1%) Frame = +1 Query: 85 DDPHDRH--SRHYIRNRRSPGPTGLLVRNISLSARVEDLRVPFERFGPVKDVYLPKNYYT 258 DDP DR+ SR + R+RRSP P+GLLVRN+ L AR EDLR+PFERFGPVKDVYLPKNYYT Sbjct: 29 DDPRDRYRESRSH-RDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT 87 Query: 259 GEPRGFGFVKFRFGEDAAEAKKRLNNTIIGGREIRIVYAEENRKTPQEMR 408 GEPRGFGFVKFRF EDAAEAK++LN+T+IGGREIRIV+AEENRKTPQEMR Sbjct: 88 GEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMR 137 >ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera] gi|298205010|emb|CBI34317.3| unnamed protein product [Vitis vinifera] Length = 287 Score = 172 bits (437), Expect = 3e-41 Identities = 86/107 (80%), Positives = 93/107 (86%) Frame = +1 Query: 88 DPHDRHSRHYIRNRRSPGPTGLLVRNISLSARVEDLRVPFERFGPVKDVYLPKNYYTGEP 267 D R SR Y R+RRSP P+GLLVRNI+L AR EDLRVPFERFGPVKDVYLPKNYYTGEP Sbjct: 26 DDRSRPSRSY-RDRRSPAPSGLLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEP 84 Query: 268 RGFGFVKFRFGEDAAEAKKRLNNTIIGGREIRIVYAEENRKTPQEMR 408 RGFGFVKFR EDAAEAK LN+++IGGREI IV+AEENRKTPQEMR Sbjct: 85 RGFGFVKFRNAEDAAEAKHHLNHSVIGGREIAIVFAEENRKTPQEMR 131 >ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis] gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis] Length = 257 Score = 171 bits (434), Expect = 6e-41 Identities = 84/110 (76%), Positives = 97/110 (88%), Gaps = 2/110 (1%) Frame = +1 Query: 85 DDPHDRH--SRHYIRNRRSPGPTGLLVRNISLSARVEDLRVPFERFGPVKDVYLPKNYYT 258 +DP DR +R + R+RRSP P+GLLVRN+ L AR EDLR PFE++GPVKDVYLPKNYYT Sbjct: 31 EDPRDRRRVTRSH-RDRRSPAPSGLLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYT 89 Query: 259 GEPRGFGFVKFRFGEDAAEAKKRLNNTIIGGREIRIVYAEENRKTPQEMR 408 GEPRGFGFVK+R+ EDAAEAK+R+N+ IIGGREIRIVYAEENRKTPQEMR Sbjct: 90 GEPRGFGFVKYRYAEDAAEAKQRMNHKIIGGREIRIVYAEENRKTPQEMR 139 >gb|ACU20250.1| unknown [Glycine max] Length = 270 Score = 170 bits (431), Expect = 1e-40 Identities = 83/101 (82%), Positives = 93/101 (92%) Frame = +1 Query: 106 SRHYIRNRRSPGPTGLLVRNISLSARVEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFV 285 SR Y R+RRSP P+GLLVRN+ L AR EDLR+PFER+GPVKDVYLPKNYYTGEPRGFGFV Sbjct: 37 SRSY-RDRRSPLPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFV 95 Query: 286 KFRFGEDAAEAKKRLNNTIIGGREIRIVYAEENRKTPQEMR 408 K+R+GEDAAEAK+ LN+TIIGGREIRIV+AEENRKT QEMR Sbjct: 96 KYRYGEDAAEAKQHLNHTIIGGREIRIVFAEENRKTSQEMR 136 >ref|XP_002314444.1| predicted protein [Populus trichocarpa] gi|222863484|gb|EEF00615.1| predicted protein [Populus trichocarpa] Length = 252 Score = 169 bits (428), Expect = 3e-40 Identities = 82/110 (74%), Positives = 97/110 (88%), Gaps = 2/110 (1%) Frame = +1 Query: 88 DPHDRH--SRHYIRNRRSPGPTGLLVRNISLSARVEDLRVPFERFGPVKDVYLPKNYYTG 261 D DRH +R Y R+RRSP +GLL+RN+ L AR EDLR PFE+FGP+KD+YLPKNY+TG Sbjct: 28 DDEDRHRDTRSY-RDRRSPASSGLLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTG 86 Query: 262 EPRGFGFVKFRFGEDAAEAKKRLNNTIIGGREIRIVYAEENRKTPQEMRR 411 EPRGFGFVK+R+GEDAAEAKKR+++ IIGGREIRIV+AEENRKTPQEMRR Sbjct: 87 EPRGFGFVKYRYGEDAAEAKKRMDHKIIGGREIRIVFAEENRKTPQEMRR 136