BLASTX nr result

ID: Bupleurum21_contig00004809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004809
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216...   181   5e-44
ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262...   172   3e-41
ref|XP_002516840.1| serine/arginine rich splicing factor, putati...   171   6e-41
gb|ACU20250.1| unknown [Glycine max]                                  170   1e-40
ref|XP_002314444.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40

>ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
           gi|449495419|ref|XP_004159835.1| PREDICTED:
           uncharacterized LOC101216537 [Cucumis sativus]
          Length = 248

 Score =  181 bits (460), Expect = 5e-44
 Identities = 89/110 (80%), Positives = 100/110 (90%), Gaps = 2/110 (1%)
 Frame = +1

Query: 85  DDPHDRH--SRHYIRNRRSPGPTGLLVRNISLSARVEDLRVPFERFGPVKDVYLPKNYYT 258
           DDP DR+  SR + R+RRSP P+GLLVRN+ L AR EDLR+PFERFGPVKDVYLPKNYYT
Sbjct: 29  DDPRDRYRESRSH-RDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT 87

Query: 259 GEPRGFGFVKFRFGEDAAEAKKRLNNTIIGGREIRIVYAEENRKTPQEMR 408
           GEPRGFGFVKFRF EDAAEAK++LN+T+IGGREIRIV+AEENRKTPQEMR
Sbjct: 88  GEPRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMR 137


>ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
           gi|298205010|emb|CBI34317.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  172 bits (437), Expect = 3e-41
 Identities = 86/107 (80%), Positives = 93/107 (86%)
 Frame = +1

Query: 88  DPHDRHSRHYIRNRRSPGPTGLLVRNISLSARVEDLRVPFERFGPVKDVYLPKNYYTGEP 267
           D   R SR Y R+RRSP P+GLLVRNI+L AR EDLRVPFERFGPVKDVYLPKNYYTGEP
Sbjct: 26  DDRSRPSRSY-RDRRSPAPSGLLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEP 84

Query: 268 RGFGFVKFRFGEDAAEAKKRLNNTIIGGREIRIVYAEENRKTPQEMR 408
           RGFGFVKFR  EDAAEAK  LN+++IGGREI IV+AEENRKTPQEMR
Sbjct: 85  RGFGFVKFRNAEDAAEAKHHLNHSVIGGREIAIVFAEENRKTPQEMR 131


>ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223543928|gb|EEF45454.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score =  171 bits (434), Expect = 6e-41
 Identities = 84/110 (76%), Positives = 97/110 (88%), Gaps = 2/110 (1%)
 Frame = +1

Query: 85  DDPHDRH--SRHYIRNRRSPGPTGLLVRNISLSARVEDLRVPFERFGPVKDVYLPKNYYT 258
           +DP DR   +R + R+RRSP P+GLLVRN+ L AR EDLR PFE++GPVKDVYLPKNYYT
Sbjct: 31  EDPRDRRRVTRSH-RDRRSPAPSGLLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYT 89

Query: 259 GEPRGFGFVKFRFGEDAAEAKKRLNNTIIGGREIRIVYAEENRKTPQEMR 408
           GEPRGFGFVK+R+ EDAAEAK+R+N+ IIGGREIRIVYAEENRKTPQEMR
Sbjct: 90  GEPRGFGFVKYRYAEDAAEAKQRMNHKIIGGREIRIVYAEENRKTPQEMR 139


>gb|ACU20250.1| unknown [Glycine max]
          Length = 270

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/101 (82%), Positives = 93/101 (92%)
 Frame = +1

Query: 106 SRHYIRNRRSPGPTGLLVRNISLSARVEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFV 285
           SR Y R+RRSP P+GLLVRN+ L AR EDLR+PFER+GPVKDVYLPKNYYTGEPRGFGFV
Sbjct: 37  SRSY-RDRRSPLPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFV 95

Query: 286 KFRFGEDAAEAKKRLNNTIIGGREIRIVYAEENRKTPQEMR 408
           K+R+GEDAAEAK+ LN+TIIGGREIRIV+AEENRKT QEMR
Sbjct: 96  KYRYGEDAAEAKQHLNHTIIGGREIRIVFAEENRKTSQEMR 136


>ref|XP_002314444.1| predicted protein [Populus trichocarpa] gi|222863484|gb|EEF00615.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  169 bits (428), Expect = 3e-40
 Identities = 82/110 (74%), Positives = 97/110 (88%), Gaps = 2/110 (1%)
 Frame = +1

Query: 88  DPHDRH--SRHYIRNRRSPGPTGLLVRNISLSARVEDLRVPFERFGPVKDVYLPKNYYTG 261
           D  DRH  +R Y R+RRSP  +GLL+RN+ L AR EDLR PFE+FGP+KD+YLPKNY+TG
Sbjct: 28  DDEDRHRDTRSY-RDRRSPASSGLLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTG 86

Query: 262 EPRGFGFVKFRFGEDAAEAKKRLNNTIIGGREIRIVYAEENRKTPQEMRR 411
           EPRGFGFVK+R+GEDAAEAKKR+++ IIGGREIRIV+AEENRKTPQEMRR
Sbjct: 87  EPRGFGFVKYRYGEDAAEAKKRMDHKIIGGREIRIVFAEENRKTPQEMRR 136


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