BLASTX nr result

ID: Bupleurum21_contig00004803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004803
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890192.1| hypothetical protein ARALYDRAFT_471888 [Arab...   144   1e-32
ref|NP_973847.1| uridylyltransferase-related protein [Arabidopsi...   141   5e-32
ref|NP_564010.1| uridylyltransferase-related protein [Arabidopsi...   141   5e-32
ref|XP_002523024.1| amino acid binding protein, putative [Ricinu...   140   1e-31
ref|XP_004173532.1| PREDICTED: unknown protein DS12 from 2D-PAGE...   138   4e-31

>ref|XP_002890192.1| hypothetical protein ARALYDRAFT_471888 [Arabidopsis lyrata subsp.
           lyrata] gi|297336034|gb|EFH66451.1| hypothetical protein
           ARALYDRAFT_471888 [Arabidopsis lyrata subsp. lyrata]
          Length = 290

 Score =  144 bits (362), Expect = 1e-32
 Identities = 74/105 (70%), Positives = 84/105 (80%), Gaps = 8/105 (7%)
 Frame = -3

Query: 293 SVKASPSSATAVEE--------ESSKTPTPSVILDQDSDPDSTVVEITFGDRLGTLLDTM 138
           S+K   S+ATAVE         +S K PTP VI+DQDSDPD+TV+E+TFGDRLG LLDTM
Sbjct: 55  SLKPRASNATAVENGKQGESAADSDKVPTPVVIIDQDSDPDATVLEVTFGDRLGALLDTM 114

Query: 137 EALKNLGLNVVKANVHLDDSGKHTKFFITKASTGRKIEDPELLEA 3
            ALKNLGLNVVKANV+LD SGKH KF ITKA +GRK+EDPELLEA
Sbjct: 115 NALKNLGLNVVKANVYLDSSGKHNKFAITKADSGRKVEDPELLEA 159


>ref|NP_973847.1| uridylyltransferase-related protein [Arabidopsis thaliana]
           gi|332191393|gb|AEE29514.1| uridylyltransferase-related
           protein [Arabidopsis thaliana]
          Length = 213

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/105 (68%), Positives = 84/105 (80%), Gaps = 8/105 (7%)
 Frame = -3

Query: 293 SVKASPSSATAVEE--------ESSKTPTPSVILDQDSDPDSTVVEITFGDRLGTLLDTM 138
           ++K   S+ATAVE         +S K PTP VI+DQDSDPD+TV+E+TFGDRLG LLDTM
Sbjct: 55  TLKIRASNATAVENGKQEGSAADSDKVPTPVVIIDQDSDPDATVLEVTFGDRLGALLDTM 114

Query: 137 EALKNLGLNVVKANVHLDDSGKHTKFFITKASTGRKIEDPELLEA 3
            ALKNLGLNVVKANV+LD SGKH KF IT+A +GRK+EDPELLEA
Sbjct: 115 NALKNLGLNVVKANVYLDSSGKHNKFAITRADSGRKVEDPELLEA 159


>ref|NP_564010.1| uridylyltransferase-related protein [Arabidopsis thaliana]
           gi|9802776|gb|AAF99845.1|AC051629_12 Unknown protein
           [Arabidopsis thaliana]
           gi|14423502|gb|AAK62433.1|AF386988_1 Unknown protein
           [Arabidopsis thaliana] gi|30023784|gb|AAP13425.1|
           At1g16880 [Arabidopsis thaliana]
           gi|332191392|gb|AEE29513.1| uridylyltransferase-related
           protein [Arabidopsis thaliana]
           gi|347949478|gb|AEP31952.1| ACT domain-containing
           protein [Arabidopsis thaliana]
          Length = 290

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/105 (68%), Positives = 84/105 (80%), Gaps = 8/105 (7%)
 Frame = -3

Query: 293 SVKASPSSATAVEE--------ESSKTPTPSVILDQDSDPDSTVVEITFGDRLGTLLDTM 138
           ++K   S+ATAVE         +S K PTP VI+DQDSDPD+TV+E+TFGDRLG LLDTM
Sbjct: 55  TLKIRASNATAVENGKQEGSAADSDKVPTPVVIIDQDSDPDATVLEVTFGDRLGALLDTM 114

Query: 137 EALKNLGLNVVKANVHLDDSGKHTKFFITKASTGRKIEDPELLEA 3
            ALKNLGLNVVKANV+LD SGKH KF IT+A +GRK+EDPELLEA
Sbjct: 115 NALKNLGLNVVKANVYLDSSGKHNKFAITRADSGRKVEDPELLEA 159


>ref|XP_002523024.1| amino acid binding protein, putative [Ricinus communis]
           gi|223537746|gb|EEF39366.1| amino acid binding protein,
           putative [Ricinus communis]
          Length = 282

 Score =  140 bits (353), Expect = 1e-31
 Identities = 72/95 (75%), Positives = 78/95 (82%), Gaps = 4/95 (4%)
 Frame = -3

Query: 275 SSATAVEE----ESSKTPTPSVILDQDSDPDSTVVEITFGDRLGTLLDTMEALKNLGLNV 108
           SSATAVE+    E+   PTP VI+DQDSDPD+TVVEITFGDRLG LLDTM AL+NLGLNV
Sbjct: 57  SSATAVEDGSHNETDSVPTPKVIIDQDSDPDATVVEITFGDRLGALLDTMNALRNLGLNV 116

Query: 107 VKANVHLDDSGKHTKFFITKASTGRKIEDPELLEA 3
            KANV LD SGKH  F ITKA TGRK+EDPELLEA
Sbjct: 117 TKANVFLDSSGKHNTFSITKADTGRKVEDPELLEA 151


>ref|XP_004173532.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 224

 Score =  138 bits (348), Expect = 4e-31
 Identities = 74/104 (71%), Positives = 82/104 (78%), Gaps = 4/104 (3%)
 Frame = -3

Query: 302 SNISVKASPSSATAVEEESS----KTPTPSVILDQDSDPDSTVVEITFGDRLGTLLDTME 135
           SN+      SSATAVE+ S+      PTP VI+DQDSD D+TVVEITFGDRLG LLDTM 
Sbjct: 58  SNMKSIPRASSATAVEDGSNGDTDTIPTPIVIIDQDSDQDATVVEITFGDRLGALLDTMN 117

Query: 134 ALKNLGLNVVKANVHLDDSGKHTKFFITKASTGRKIEDPELLEA 3
           ALKNLGLNVVKANV LD SGKH +F ITKA TGRK++DPELLEA
Sbjct: 118 ALKNLGLNVVKANVFLDSSGKHNRFSITKADTGRKVDDPELLEA 161


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