BLASTX nr result

ID: Bupleurum21_contig00004800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004800
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AET97661.1| eukaryotic translation initiation factor 5A4 [Cam...   232   5e-59
sp|Q9SC12.1|IF5A_SENVE RecName: Full=Eukaryotic translation init...   231   9e-59
gb|ACJ85889.1| unknown [Medicago truncatula] gi|388497092|gb|AFK...   231   9e-59
gb|AEF15868.1| eukaryotic translation initiation factor 5A3 [Pop...   231   1e-58
ref|NP_001234499.1| eukaryotic translation initiation factor 5A-...   231   1e-58

>gb|AET97661.1| eukaryotic translation initiation factor 5A4 [Camellia sinensis]
          Length = 160

 Score =  232 bits (592), Expect = 5e-59
 Identities = 114/150 (76%), Positives = 125/150 (83%)
 Frame = +1

Query: 4   FESKADAGASKTYPQQAGTIRKGGYLNINNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFN 183
           FESKADAGASKTYPQQAGTIRK GY+ I NRPCKVVEVSTSKTGKHGHAKCHFVAIDIFN
Sbjct: 8   FESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFN 67

Query: 184 GRKLEDIVPSSHNCDVPHVNRTDYQLLAISDDDFVSLLTENGXXXXXXXXXXXXXXXXQI 363
           G+KLEDIVPSSHNCDVPHVNRTDYQL+ IS+D FVSLLTENG                QI
Sbjct: 68  GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDVLLTQI 127

Query: 364 QEAYDQGKELLVSVMSAMGEEQIVGLKDIG 453
           ++ + +GK+L+V+VMSAMGEEQI  LKDIG
Sbjct: 128 KDGFGEGKDLVVTVMSAMGEEQICALKDIG 157


>sp|Q9SC12.1|IF5A_SENVE RecName: Full=Eukaryotic translation initiation factor 5A;
           Short=eIF-5A gi|6689385|emb|CAB65463.1| translation
           initiation factor 5A precursor protein (eIF-5A) [Senecio
           vernalis]
          Length = 159

 Score =  231 bits (590), Expect = 9e-59
 Identities = 114/151 (75%), Positives = 126/151 (83%)
 Frame = +1

Query: 1   EFESKADAGASKTYPQQAGTIRKGGYLNINNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF 180
           +FESKADAGASKTYPQQAGTIRKGG++ I NR CKVVEVSTSKTGKHGHAKCHFVAIDIF
Sbjct: 7   QFESKADAGASKTYPQQAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHFVAIDIF 66

Query: 181 NGRKLEDIVPSSHNCDVPHVNRTDYQLLAISDDDFVSLLTENGXXXXXXXXXXXXXXXXQ 360
           NG+KLEDIVPSSHNCDVPHVNRTDYQL+ IS+D FVSLLTENG                Q
Sbjct: 67  NGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDALLTQ 126

Query: 361 IQEAYDQGKELLVSVMSAMGEEQIVGLKDIG 453
           I++ + +GK+L+VSVMSAMGEEQI  LKDIG
Sbjct: 127 IKDGFGEGKDLVVSVMSAMGEEQICALKDIG 157


>gb|ACJ85889.1| unknown [Medicago truncatula] gi|388497092|gb|AFK36612.1| unknown
           [Medicago truncatula]
          Length = 160

 Score =  231 bits (590), Expect = 9e-59
 Identities = 114/152 (75%), Positives = 125/152 (82%)
 Frame = +1

Query: 1   EFESKADAGASKTYPQQAGTIRKGGYLNINNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF 180
           +FESKADAGASKTYPQQAGTIRK GY+ I NRPCKVVEVSTSKTGKHGHAKCHFVAIDIF
Sbjct: 7   QFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIF 66

Query: 181 NGRKLEDIVPSSHNCDVPHVNRTDYQLLAISDDDFVSLLTENGXXXXXXXXXXXXXXXXQ 360
             +KLEDIVPSSHNCDVPHVNRTDYQL+ IS+D FVSLLTENG                Q
Sbjct: 67  TSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDSLLTQ 126

Query: 361 IQEAYDQGKELLVSVMSAMGEEQIVGLKDIGG 456
           I++ + +GK+L+VSVMSAMGEEQI  LKDIGG
Sbjct: 127 IKDGFAEGKDLVVSVMSAMGEEQICALKDIGG 158


>gb|AEF15868.1| eukaryotic translation initiation factor 5A3 [Populus tremula x
           Populus alba]
          Length = 159

 Score =  231 bits (589), Expect = 1e-58
 Identities = 113/150 (75%), Positives = 125/150 (83%)
 Frame = +1

Query: 4   FESKADAGASKTYPQQAGTIRKGGYLNINNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFN 183
           FESKADAGASKTYPQQAGTIRK GY+ I NRPCKVVEVSTSKTGKHGHAKCHFVAIDIFN
Sbjct: 8   FESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFN 67

Query: 184 GRKLEDIVPSSHNCDVPHVNRTDYQLLAISDDDFVSLLTENGXXXXXXXXXXXXXXXXQI 363
           G+KLEDIVPSSHNCDVPHVNRTDYQL+ IS+D FVSLLTENG                QI
Sbjct: 68  GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDSLLSQI 127

Query: 364 QEAYDQGKELLVSVMSAMGEEQIVGLKDIG 453
           ++ + +GK+L+V+VMS+MGEEQI  LKDIG
Sbjct: 128 KDGFGEGKDLVVTVMSSMGEEQICALKDIG 157


>ref|NP_001234499.1| eukaryotic translation initiation factor 5A-1 [Solanum
           lycopersicum] gi|20138708|sp|Q9AXQ6.1|IF5A1_SOLLC
           RecName: Full=Eukaryotic translation initiation factor
           5A-1; Short=eIF-5A-1
           gi|12407787|gb|AAG53647.1|AF296083_1 eukaryotic
           translation initiation factor 5A-1 [Solanum
           lycopersicum]
          Length = 159

 Score =  231 bits (589), Expect = 1e-58
 Identities = 112/150 (74%), Positives = 126/150 (84%)
 Frame = +1

Query: 4   FESKADAGASKTYPQQAGTIRKGGYLNINNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFN 183
           FESKADAGASKTYPQQAGTIRKGG++ I NRPCKVVEVSTSKTGKHGHAKCHFVAIDIF 
Sbjct: 8   FESKADAGASKTYPQQAGTIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFT 67

Query: 184 GRKLEDIVPSSHNCDVPHVNRTDYQLLAISDDDFVSLLTENGXXXXXXXXXXXXXXXXQI 363
           G+KLEDIVPSSHNCDVPHVNRTDYQL+ IS+D FVSLLTENG                Q+
Sbjct: 68  GKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLAQV 127

Query: 364 QEAYDQGKELLVSVMSAMGEEQIVGLKDIG 453
           ++ + +GK+L++SVMSAMGEEQI G+KDIG
Sbjct: 128 KDGFAEGKDLVLSVMSAMGEEQICGIKDIG 157


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