BLASTX nr result
ID: Bupleurum21_contig00004792
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00004792
(1845 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|... 120 e-105
ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago ... 162 3e-69
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group] 243 1e-61
ref|XP_003604154.1| Ycf68 protein [Medicago truncatula] gi|35550... 103 9e-54
ref|XP_003599576.1| Ycf68 protein [Medicago truncatula] gi|35548... 100 6e-53
>ref|XP_003610227.1| Ycf68 [Medicago truncatula] gi|355511282|gb|AES92424.1| Ycf68
[Medicago truncatula]
Length = 501
Score = 120 bits (301), Expect(4) = e-105
Identities = 66/108 (61%), Positives = 73/108 (67%)
Frame = -1
Query: 1710 GNNSWKRLLIPRRLRSKRRNPPEEGLASD*LVGEAIAYQGDDQ*LVREDDQPHWD*DTAQ 1531
GNNSWKRLLIPR+LRS+RRNPP++GLA Q
Sbjct: 85 GNNSWKRLLIPRKLRSERRNPPKDGLA--------------------------------Q 112
Query: 1530 TPTGGSSGEFSAMGESLTEQCRVEVEGPRVVNFFSRRRSNDGIWGISI 1387
TPTGGSSGEFSAMGESLTEQCRVEV+G RV+NFFS RR+NDGI GISI
Sbjct: 113 TPTGGSSGEFSAMGESLTEQCRVEVKGLRVMNFFSWRRNNDGIRGISI 160
Score = 119 bits (297), Expect(4) = e-105
Identities = 70/136 (51%), Positives = 77/136 (56%)
Frame = -2
Query: 1016 VSRLGSTFARMKLKGIDGGPHKRWSMWFNSMQSEEPYQGLTCRESS*KRGVPSGTRTQVV 837
+SRLGSTFARMKLKGIDGGPHKRW + + +E S +G
Sbjct: 218 ISRLGSTFARMKLKGIDGGPHKRWRL---------DMPRILLKERSAFGNADTG------ 262
Query: 836 HGCRQLVP*GVGLSPATSATLVFSCHH*VWNPEQTAGDKPEEGEDDVKSSCPLCPGRHTC 657
G LS A + W TAGDKPEEGEDDVKSSCPLCPGRHTC
Sbjct: 263 ---------GAWLSSARAVRC--------W----TAGDKPEEGEDDVKSSCPLCPGRHTC 301
Query: 656 YNGRDKGSRSREGELT 609
YNGRDKGSR REG+ T
Sbjct: 302 YNGRDKGSRPREGDHT 317
Score = 116 bits (290), Expect(4) = e-105
Identities = 54/57 (94%), Positives = 55/57 (96%)
Frame = -3
Query: 1294 VRRQIPGLNPGQAVETTKLEYGRGRGNFRWSGEMRRDRKEHQRRKHSAGPTLTLRDE 1124
VRRQIPGLNPGQ V+TTKLEYGRGRGNFRWSGEMRRDRKEHQ RKHSAGPTLTLRDE
Sbjct: 161 VRRQIPGLNPGQVVKTTKLEYGRGRGNFRWSGEMRRDRKEHQWRKHSAGPTLTLRDE 217
Score = 97.8 bits (242), Expect(4) = e-105
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = -1
Query: 528 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEV 394
HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEV
Sbjct: 316 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEV 360
>ref|XP_003627937.1| hypothetical protein MTR_8g040260 [Medicago truncatula]
gi|355521959|gb|AET02413.1| hypothetical protein
MTR_8g040260 [Medicago truncatula]
Length = 241
Score = 162 bits (409), Expect(2) = 3e-69
Identities = 81/108 (75%), Positives = 83/108 (76%)
Frame = +3
Query: 1488 RPLRKIPHCCLP*ESGPCLSPSVADHPLGPATDHRLGKLLPHQLANQTRAPPRADSSFCS 1667
RP HC + S V DHPLGP TDH LGKLLPHQLANQTRAPP ADSSF S
Sbjct: 134 RPFTSTRHCSIRLSRIAENSSLVDDHPLGPTTDHHLGKLLPHQLANQTRAPPWADSSFRS 193
Query: 1668 SAYGVLAAVSSCCSPPKGRFLRVTHPSATGNTTSRPTCMC*ACRQRSS 1811
SAYGVLA VSSCCSPPKG+FLRVTHPSATGNTTSR CMC ACRQRSS
Sbjct: 194 SAYGVLATVSSCCSPPKGKFLRVTHPSATGNTTSRSICMCKACRQRSS 241
Score = 128 bits (322), Expect(2) = 3e-69
Identities = 70/106 (66%), Positives = 73/106 (68%)
Frame = +1
Query: 1066 YPSFTARTTGVSNPIRSPSFRLXXXXXXXXXXFAVGVLSDLYAFHRSTGNSLCPYRTPAW 1245
YPSFTARTT VSNPIRSPSFRL FA+GV SDLYAFH STGNSL
Sbjct: 38 YPSFTARTTRVSNPIRSPSFRLSVLVSAQQSAFAIGVPSDLYAFHHSTGNSL-------- 89
Query: 1246 *FPPPVQG*ALGFDGGLKKPPTDALRPIIPDNACILCITAAAGTEL 1383
+L FDG LKKPPTDALRPII DNACILC+TAAAGTEL
Sbjct: 90 ---------SLRFDGELKKPPTDALRPIISDNACILCLTAAAGTEL 126
Score = 70.5 bits (171), Expect = 1e-09
Identities = 35/50 (70%), Positives = 39/50 (78%)
Frame = +2
Query: 815 ARADDSHAPPVSAFPKAPLSFKRIRGMSSPGKVLRFASN*TTCSTACAGP 964
ARADD+HAPPVS FPKA LSFKRI GMSSPGKVLRF + T +T + P
Sbjct: 2 ARADDNHAPPVSVFPKALLSFKRIHGMSSPGKVLRFYPSFTARTTRVSNP 51
>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
Length = 265
Score = 243 bits (620), Expect = 1e-61
Identities = 122/127 (96%), Positives = 123/127 (96%)
Frame = +2
Query: 1001 SPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFF 1180
SPGGILNALATALHGS RT PSIHRLRLGLLG LIPFAPLAFVSQCQCRPSRVLSPLVFF
Sbjct: 3 SPGGILNALATALHGSSRTTPSIHRLRLGLLGSLIPFAPLAFVSQCQCRPSRVLSPLVFF 62
Query: 1181 PISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 1360
PIS HFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL
Sbjct: 63 PISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVL 122
Query: 1361 PRLLAQS 1381
PRLLAQ+
Sbjct: 123 PRLLAQN 129
Score = 124 bits (310), Expect = 1e-25
Identities = 63/77 (81%), Positives = 67/77 (87%)
Frame = +1
Query: 1369 AGTELADAYSPDTVIASSPGKEVHDPWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSV 1548
A + L + +TVI SSP KEV DPWAF+LHAALLRQAFAHCGKFPTAASRRSLGRVSV
Sbjct: 118 ASSVLPRLLAQNTVIVSSPRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSV 177
Query: 1549 PVWLIILSDQLLIIALV 1599
PVWLIILSDQLLIIALV
Sbjct: 178 PVWLIILSDQLLIIALV 194
Score = 67.4 bits (163), Expect = 1e-08
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2
Query: 1724 VLTRYSPVRHWKHHFPSDLHVLSMPPAFIL 1813
VLTRYSPVRHWKHHFP DLHVLSMPPAFIL
Sbjct: 194 VLTRYSPVRHWKHHFPFDLHVLSMPPAFIL 223
>ref|XP_003604154.1| Ycf68 protein [Medicago truncatula] gi|355505209|gb|AES86351.1|
Ycf68 protein [Medicago truncatula]
Length = 237
Score = 103 bits (256), Expect(3) = 9e-54
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -1
Query: 528 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR 385
HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR
Sbjct: 72 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR 119
Score = 89.7 bits (221), Expect(3) = 9e-54
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 734 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSREGELT 609
TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSR REG+ T
Sbjct: 32 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRPREGDHT 73
Score = 67.0 bits (162), Expect(3) = 9e-54
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 894 MPRILLKERGAFGNADTGGAWLSSARAVRCW 802
MPRILLKER AFGNADTGGAWLSSARAVRCW
Sbjct: 1 MPRILLKERSAFGNADTGGAWLSSARAVRCW 31
>ref|XP_003599576.1| Ycf68 protein [Medicago truncatula] gi|355488624|gb|AES69827.1|
Ycf68 protein [Medicago truncatula]
Length = 237
Score = 100 bits (249), Expect(3) = 6e-53
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -1
Query: 528 HTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR 385
+TAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR
Sbjct: 72 NTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTR 119
Score = 89.7 bits (221), Expect(3) = 6e-53
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 734 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSREGELT 609
TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSR REG+ T
Sbjct: 32 TAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRPREGDNT 73
Score = 67.0 bits (162), Expect(3) = 6e-53
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 894 MPRILLKERGAFGNADTGGAWLSSARAVRCW 802
MPRILLKER AFGNADTGGAWLSSARAVRCW
Sbjct: 1 MPRILLKERSAFGNADTGGAWLSSARAVRCW 31