BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004743
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   607   e-171
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              603   e-170
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   587   e-165
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   558   e-157
ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2...   534   e-149

>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 537

 Score =  607 bits (1565), Expect = e-171
 Identities = 288/449 (64%), Positives = 362/449 (80%), Gaps = 3/449 (0%)
 Frame = -2

Query: 1340 CLQLTHLHQIQSHLIVSGTISDAFAAGKLISLLVLF---DHSHAYTLFRFLPHRSAYLWN 1170
            C+ + H+ QIQSHL VSGT+ D FAAG++IS   +    D SHAY LF  LP R++++WN
Sbjct: 23   CVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWN 82

Query: 1169 TILRAFVENIDSNSALYVYKMMLNSGFLPNNYTFSFVVRACSELCDVGFGLLCHAQVIKL 990
            T+LRAF +  +  + L +YK ML++GFLPNNYTFSF+++AC++L D+ FG+L HAQ ++L
Sbjct: 83   TMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRL 142

Query: 989  GWESYDFVQNGLIHFYVTCDLMSHARKLFDVSSSRDVVTWTAVVNGYAKCGQVVTAKKLF 810
            GWE+YDFVQNGL+H Y +C+ M  AR+LFD S +RDVVTWTAV+NGYAK GQVV A++LF
Sbjct: 143  GWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLF 202

Query: 809  DEMPERNVVSWSALINGYVKVGLFKEALEIFNDMQKSGVRPNHAGIVXXXXXXXXXXXLD 630
            DEMPE+N VSWSA+I GY ++GLF+EALE+FNDMQ +G RPNH  IV           LD
Sbjct: 203  DEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALD 262

Query: 629  QGKWIHAYVDKSKMELDKVLGTTLIDMYAKCGCFEMAYRVFEEMPCRDVFAFTSLISGLS 450
            QG+WIHAYVD+++M LD++LGT LIDMYAKCGC E A RVF+EM  RDVFAFTSLISGL+
Sbjct: 263  QGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLA 322

Query: 449  NHGESAMAVELLKRMGAEGIKPNKVTFICILSACARAGLVDEGLRIFESMNDVYGLKPGV 270
            NHG SA A+E+  RM  EG+ PN+VTFIC+LSAC+R GLV+EGLRIF+SM ++YG++P V
Sbjct: 323  NHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVV 382

Query: 269  EHYGCLVDLLGRAGLLEQAKNVVKDMPMEPDIYVLGALLNGCRVQGDVDLGIEMVEGLVN 90
            +HYGCLVDLLGRAG+LE AK VV++MP+EPD YVLGALLN CRV GDV+LG E VE L  
Sbjct: 383  QHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAE 442

Query: 89   RSLDHSGVYVLLSNIYASANKWDLVERVR 3
            RSLDH GV+VLLSN+YASAN+W+ V +VR
Sbjct: 443  RSLDHGGVHVLLSNMYASANQWEDVAKVR 471


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  603 bits (1556), Expect = e-170
 Identities = 287/446 (64%), Positives = 360/446 (80%), Gaps = 3/446 (0%)
 Frame = -2

Query: 1331 LTHLHQIQSHLIVSGTISDAFAAGKLISLLVLF---DHSHAYTLFRFLPHRSAYLWNTIL 1161
            + H+ QIQSHL VSGT+ D FAAG++IS   +    D SHAY LF  LP R++++WNT+L
Sbjct: 1    MAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTML 60

Query: 1160 RAFVENIDSNSALYVYKMMLNSGFLPNNYTFSFVVRACSELCDVGFGLLCHAQVIKLGWE 981
            RAF +  +  + L +YK ML++GFLPNNYTFSF+++AC++L D+ FG+L HAQ ++LGWE
Sbjct: 61   RAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWE 120

Query: 980  SYDFVQNGLIHFYVTCDLMSHARKLFDVSSSRDVVTWTAVVNGYAKCGQVVTAKKLFDEM 801
            +YDFVQNGL+H Y +C+ M  AR+LFD S +RDVVTWTAV+NGYAK GQVV A++LFDEM
Sbjct: 121  AYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEM 180

Query: 800  PERNVVSWSALINGYVKVGLFKEALEIFNDMQKSGVRPNHAGIVXXXXXXXXXXXLDQGK 621
            PE+N VSWSA+I GY ++GLF+EALE+FNDMQ +G RPNH  IV           LDQG+
Sbjct: 181  PEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGR 240

Query: 620  WIHAYVDKSKMELDKVLGTTLIDMYAKCGCFEMAYRVFEEMPCRDVFAFTSLISGLSNHG 441
            WIHAYVD+++M LD++LGT LIDMYAKCGC E A RVF+EM  RDVFAFTSLISGL+NHG
Sbjct: 241  WIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHG 300

Query: 440  ESAMAVELLKRMGAEGIKPNKVTFICILSACARAGLVDEGLRIFESMNDVYGLKPGVEHY 261
             SA A+E+  RM  EG+ PN+VTFIC+LSAC+R GLV+EGLRIF+SM ++YG++P V+HY
Sbjct: 301  HSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHY 360

Query: 260  GCLVDLLGRAGLLEQAKNVVKDMPMEPDIYVLGALLNGCRVQGDVDLGIEMVEGLVNRSL 81
            GCLVDLLGRAG+LE AK VV++MP+EPD YVLGALLN CRV GDV+LG E VE L  RSL
Sbjct: 361  GCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSL 420

Query: 80   DHSGVYVLLSNIYASANKWDLVERVR 3
            DH GV+VLLSN+YASAN+W+ V +VR
Sbjct: 421  DHGGVHVLLSNMYASANQWEDVAKVR 446


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
            gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
            protein [Gossypium hirsutum]
          Length = 532

 Score =  587 bits (1512), Expect = e-165
 Identities = 287/449 (63%), Positives = 354/449 (78%), Gaps = 3/449 (0%)
 Frame = -2

Query: 1340 CLQLTHLHQIQSHLIVSGTISDAFAAGKLISLLVLF---DHSHAYTLFRFLPHRSAYLWN 1170
            C  ++ + Q+ SHLIVS +  D FAAGK+ISL  +    D SHAY LF  LPHR+ ++WN
Sbjct: 20   CRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSLPHRTTFIWN 79

Query: 1169 TILRAFVENIDSNSALYVYKMMLNSGFLPNNYTFSFVVRACSELCDVGFGLLCHAQVIKL 990
            TI+R FVE  ++ +AL +YK ML +GFLPNNYTFSFV+RAC++   VG  L  HAQVIKL
Sbjct: 80   TIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTDNSPVG--LASHAQVIKL 137

Query: 989  GWESYDFVQNGLIHFYVTCDLMSHARKLFDVSSSRDVVTWTAVVNGYAKCGQVVTAKKLF 810
            GWESYDFV NGLIH Y     +  ARKLFDVS+ RDV+TWTA++NGY K G V  A++LF
Sbjct: 138  GWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGHVEFARELF 197

Query: 809  DEMPERNVVSWSALINGYVKVGLFKEALEIFNDMQKSGVRPNHAGIVXXXXXXXXXXXLD 630
            D+MPERN VSWSA+I GYV +G+F+EALE+FND+Q +G+RPNHAGIV           LD
Sbjct: 198  DQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTACSYLGSLD 257

Query: 629  QGKWIHAYVDKSKMELDKVLGTTLIDMYAKCGCFEMAYRVFEEMPCRDVFAFTSLISGLS 450
             G+WIHAYVD++  ELD+VLGT L+DMYAKCGC E+A  VFE+MP +D FAFTSLISGL+
Sbjct: 258  HGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAFAFTSLISGLA 317

Query: 449  NHGESAMAVELLKRMGAEGIKPNKVTFICILSACARAGLVDEGLRIFESMNDVYGLKPGV 270
            NHG+SA A++L  RM +E + PN+VTFIC+LSAC+R GLVDEGLRIF  M+ VYG++PGV
Sbjct: 318  NHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNCMSVVYGIEPGV 377

Query: 269  EHYGCLVDLLGRAGLLEQAKNVVKDMPMEPDIYVLGALLNGCRVQGDVDLGIEMVEGLVN 90
            +HYGC+VDLLGRAGLLE+AK +V++MPMEPD YVLGALLN CRV GDV+LG E VE LV 
Sbjct: 378  QHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVELGKETVESLVE 437

Query: 89   RSLDHSGVYVLLSNIYASANKWDLVERVR 3
            R LDH GV+VLLSN+YAS+N+WD V +VR
Sbjct: 438  RGLDHGGVHVLLSNMYASSNQWDWVVKVR 466


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  558 bits (1439), Expect = e-157
 Identities = 269/450 (59%), Positives = 343/450 (76%), Gaps = 4/450 (0%)
 Frame = -2

Query: 1340 CLQLTHLHQIQSHLIVSGTISDAFAAGKLISLLVL----FDHSHAYTLFRFLPHRSAYLW 1173
            C  ++ + QIQ+HL VSGT+ D +AA K+IS   L    F  SHAY LF  L HRS ++W
Sbjct: 20   CRTISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLGLRHRSTFIW 79

Query: 1172 NTILRAFVENIDSNSALYVYKMMLNSGFLPNNYTFSFVVRACSELCDVGFGLLCHAQVIK 993
            NT++RAF E  +   A+ ++K ML S FLPNNYT+SF+ +AC++L ++  GL CH Q IK
Sbjct: 80   NTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNNLYLGLACHCQSIK 139

Query: 992  LGWESYDFVQNGLIHFYVTCDLMSHARKLFDVSSSRDVVTWTAVVNGYAKCGQVVTAKKL 813
            LGWE YDFVQNGL+H +     M  ARKLFD+SS+RDV+TWTA++NGY + GQV+  ++L
Sbjct: 140  LGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGYVRAGQVLIGREL 199

Query: 812  FDEMPERNVVSWSALINGYVKVGLFKEALEIFNDMQKSGVRPNHAGIVXXXXXXXXXXXL 633
            FD+MPERN VSWSA+I GYV+VG F+EALE+FN M  SG  PNHAGIV           L
Sbjct: 200  FDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCAINACASLGAL 259

Query: 632  DQGKWIHAYVDKSKMELDKVLGTTLIDMYAKCGCFEMAYRVFEEMPCRDVFAFTSLISGL 453
            DQG+WIH Y+ +++M+LD+V+G  LIDMYAKCGC E+A  +F E+  RDV  +T LISGL
Sbjct: 260  DQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELRNRDVHVYTCLISGL 319

Query: 452  SNHGESAMAVELLKRMGAEGIKPNKVTFICILSACARAGLVDEGLRIFESMNDVYGLKPG 273
            +NHG+SA AVEL +RM +EG+ PN+VTF+ +L+AC+R GLVD+GLRIFE+M+ +YG +P 
Sbjct: 320  ANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLRIFENMSKIYGDEPQ 379

Query: 272  VEHYGCLVDLLGRAGLLEQAKNVVKDMPMEPDIYVLGALLNGCRVQGDVDLGIEMVEGLV 93
            V+HYGCLVDLLGRAG LE+AK +VK+MPM+PD YVLGALLN  RV GDV+LG E VE L 
Sbjct: 380  VQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVYGDVELGEETVESLA 439

Query: 92   NRSLDHSGVYVLLSNIYASANKWDLVERVR 3
              SLDHSGV+V+LSN+YASANKWD V RVR
Sbjct: 440  QLSLDHSGVHVVLSNMYASANKWDEVARVR 469


>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
            predicted protein [Populus trichocarpa]
          Length = 540

 Score =  534 bits (1375), Expect = e-149
 Identities = 260/454 (57%), Positives = 334/454 (73%), Gaps = 9/454 (1%)
 Frame = -2

Query: 1337 LQLTHLHQIQSHLIVSGTISDAFAAGKLISLLVLFDHSH---------AYTLFRFLPHRS 1185
            L ++ L QIQSHL V+ T+ D +AA K+ISL     H+H         A  LF  L ++S
Sbjct: 22   LTISQLKQIQSHLTVTATLKDPYAAAKIISL-----HAHSNARSSLFYAERLFLCLQNKS 76

Query: 1184 AYLWNTILRAFVENIDSNSALYVYKMMLNSGFLPNNYTFSFVVRACSELCDVGFGLLCHA 1005
             ++WNT+++AFVE  ++  A  +YK ML S +LPNN+TFSFV+RAC ++ ++  GL  H 
Sbjct: 77   TFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQMGLCFHG 136

Query: 1004 QVIKLGWESYDFVQNGLIHFYVTCDLMSHARKLFDVSSSRDVVTWTAVVNGYAKCGQVVT 825
            QV+K GWESYDFVQNGLIH Y  C  M  AR +FD+S  RDVVTWT +++GY   GQV+ 
Sbjct: 137  QVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQVLI 196

Query: 824  AKKLFDEMPERNVVSWSALINGYVKVGLFKEALEIFNDMQKSGVRPNHAGIVXXXXXXXX 645
            A++LFD MPE+N VSW ALI GYV++G FKEALE+F DMQ SG R N A IV        
Sbjct: 197  ARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAF 256

Query: 644  XXXLDQGKWIHAYVDKSKMELDKVLGTTLIDMYAKCGCFEMAYRVFEEMPCRDVFAFTSL 465
               LDQG+WIHAYV +  M LD++LGT LIDMYAKCGC EMA  VF+EM  RDV+AFT L
Sbjct: 257  LGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVYAFTCL 316

Query: 464  ISGLSNHGESAMAVELLKRMGAEGIKPNKVTFICILSACARAGLVDEGLRIFESMNDVYG 285
            ISGL+NH +S  A++L  RM  EG+ PN+VTF+C+L+AC+R G+VDEGLRIFESM++ Y 
Sbjct: 317  ISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYV 376

Query: 284  LKPGVEHYGCLVDLLGRAGLLEQAKNVVKDMPMEPDIYVLGALLNGCRVQGDVDLGIEMV 105
            ++P ++HYGCLVDLLGRAG +E+AK VV++MP++PD Y LGALL+ CRV GDV LG EMV
Sbjct: 377  IEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGEEMV 436

Query: 104  EGLVNRSLDHSGVYVLLSNIYASANKWDLVERVR 3
            + LV R LDH GV+VLLSN+YASA+KW+   ++R
Sbjct: 437  DSLVQRCLDHGGVHVLLSNMYASADKWEDASKIR 470