BLASTX nr result
ID: Bupleurum21_contig00004741
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00004741
(1439 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig... 687 0.0
emb|CBI23000.3| unnamed protein product [Vitis vinifera] 687 0.0
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera] 685 0.0
ref|XP_002516937.1| nucleotide binding protein, putative [Ricinu... 633 e-179
ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|2... 619 e-175
>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
vinifera]
Length = 1339
Score = 687 bits (1773), Expect = 0.0
Identities = 322/479 (67%), Positives = 396/479 (82%)
Frame = -1
Query: 1439 ESLLCDESPTTQKNAAITLSNLGGTYAWTGEPYTVAWLVKKAGLTSLHHKNMIRNIDWSD 1260
ES++C+E+ TQ +A LSNLGGTY+WTGEPYTVAWLVKKAGLTSL+H+NMIRN DW D
Sbjct: 840 ESMVCEENSATQILSAFILSNLGGTYSWTGEPYTVAWLVKKAGLTSLYHRNMIRNFDWLD 899
Query: 1259 QSIQDAGTDAWCTKIAKCIIKFGKPVFHTLKKGLESKSKSISRECLITTAWLGCEIVKTP 1080
QS+QD GTD WC+KI + IIK G P+FH L+KGL+SK + +SR+CL AWLG EI TP
Sbjct: 900 QSLQDTGTDTWCSKIGRSIIKGGIPLFHALEKGLKSKVRRVSRDCLTAIAWLGYEIATTP 959
Query: 1079 DDLRYTACEILLSSIEQYVHPGVELEERLLACLCIYNYASGRAMQKLVHFSEGVRESLRR 900
++LRY+ACEILLS IEQ++HPG++LEERLLACLCIYNY SG+ MQKL+HFSEGVRESL R
Sbjct: 960 NELRYSACEILLSGIEQFLHPGLDLEERLLACLCIYNYTSGKGMQKLIHFSEGVRESLGR 1019
Query: 899 LSSISWMAEELLKVADYLQPDKWRISCVHTQLLEMGNNCSGAVNALIFFKGELYSGYADG 720
LS+I+WMAEELLK+ADY P K ISCVHTQ+LEMG CSGAV ALI+++G+L SGY+DG
Sbjct: 1020 LSNITWMAEELLKIADYFLPYKSHISCVHTQILEMGRKCSGAVTALIYYRGQLCSGYSDG 1079
Query: 719 SIKAWDVKGQSATLVRDIKVHKKAVTCFSLFEPQNCLLSGSADKTIRMWQMVEQKLECIQ 540
SIK WD+KGQSATLV DIK H+KAVTCFS FEP + LLSGSADKTIR+WQMV++K+EC +
Sbjct: 1080 SIKVWDIKGQSATLVLDIKEHRKAVTCFSHFEPGDSLLSGSADKTIRVWQMVKRKMECTE 1139
Query: 539 VIAAKSSVQRVDTSVNMIFVITHSNNMKVFDASKMDKEVYKKKNVKCINVKEGKYYLGCK 360
VI+ K VQ +DT +IF +TH + +KVFDAS+ K++ K K+VKC+ V +G+ Y+GC
Sbjct: 1140 VISTKEPVQNLDTHGQLIFTVTHGHGVKVFDASRKVKDICKSKHVKCVRVVQGRLYIGCM 1199
Query: 359 DSSIQEVALTNNRHQEMKAPSWSWRLQRKSINSIALYKDWLYSASSVVEGSPIKEWKRNG 180
DSSIQEV +T R QE++AP+ SWR+Q + INSI +YKDWLYSAS +VEGS KEWKR+
Sbjct: 1200 DSSIQEVVITRAREQEIRAPAKSWRMQNRPINSIVVYKDWLYSASDIVEGSNFKEWKRHS 1259
Query: 179 KPQMTIVPEKSTTITAMRVVEDFIYLQCSSSMNSLQIWLRGAQHKVGRLSAGSKITSLL 3
KPQM++VP+K ++ AM +VEDFIYL CSSS + LQIWLRG Q K GRLSAGS+ITSLL
Sbjct: 1260 KPQMSMVPDKGASVLAMGIVEDFIYLNCSSSTSILQIWLRGTQQKAGRLSAGSRITSLL 1318
>emb|CBI23000.3| unnamed protein product [Vitis vinifera]
Length = 1274
Score = 687 bits (1773), Expect = 0.0
Identities = 322/479 (67%), Positives = 396/479 (82%)
Frame = -1
Query: 1439 ESLLCDESPTTQKNAAITLSNLGGTYAWTGEPYTVAWLVKKAGLTSLHHKNMIRNIDWSD 1260
ES++C+E+ TQ +A LSNLGGTY+WTGEPYTVAWLVKKAGLTSL+H+NMIRN DW D
Sbjct: 775 ESMVCEENSATQILSAFILSNLGGTYSWTGEPYTVAWLVKKAGLTSLYHRNMIRNFDWLD 834
Query: 1259 QSIQDAGTDAWCTKIAKCIIKFGKPVFHTLKKGLESKSKSISRECLITTAWLGCEIVKTP 1080
QS+QD GTD WC+KI + IIK G P+FH L+KGL+SK + +SR+CL AWLG EI TP
Sbjct: 835 QSLQDTGTDTWCSKIGRSIIKGGIPLFHALEKGLKSKVRRVSRDCLTAIAWLGYEIATTP 894
Query: 1079 DDLRYTACEILLSSIEQYVHPGVELEERLLACLCIYNYASGRAMQKLVHFSEGVRESLRR 900
++LRY+ACEILLS IEQ++HPG++LEERLLACLCIYNY SG+ MQKL+HFSEGVRESL R
Sbjct: 895 NELRYSACEILLSGIEQFLHPGLDLEERLLACLCIYNYTSGKGMQKLIHFSEGVRESLGR 954
Query: 899 LSSISWMAEELLKVADYLQPDKWRISCVHTQLLEMGNNCSGAVNALIFFKGELYSGYADG 720
LS+I+WMAEELLK+ADY P K ISCVHTQ+LEMG CSGAV ALI+++G+L SGY+DG
Sbjct: 955 LSNITWMAEELLKIADYFLPYKSHISCVHTQILEMGRKCSGAVTALIYYRGQLCSGYSDG 1014
Query: 719 SIKAWDVKGQSATLVRDIKVHKKAVTCFSLFEPQNCLLSGSADKTIRMWQMVEQKLECIQ 540
SIK WD+KGQSATLV DIK H+KAVTCFS FEP + LLSGSADKTIR+WQMV++K+EC +
Sbjct: 1015 SIKVWDIKGQSATLVLDIKEHRKAVTCFSHFEPGDSLLSGSADKTIRVWQMVKRKMECTE 1074
Query: 539 VIAAKSSVQRVDTSVNMIFVITHSNNMKVFDASKMDKEVYKKKNVKCINVKEGKYYLGCK 360
VI+ K VQ +DT +IF +TH + +KVFDAS+ K++ K K+VKC+ V +G+ Y+GC
Sbjct: 1075 VISTKEPVQNLDTHGQLIFTVTHGHGVKVFDASRKVKDICKSKHVKCVRVVQGRLYIGCM 1134
Query: 359 DSSIQEVALTNNRHQEMKAPSWSWRLQRKSINSIALYKDWLYSASSVVEGSPIKEWKRNG 180
DSSIQEV +T R QE++AP+ SWR+Q + INSI +YKDWLYSAS +VEGS KEWKR+
Sbjct: 1135 DSSIQEVVITRAREQEIRAPAKSWRMQNRPINSIVVYKDWLYSASDIVEGSNFKEWKRHS 1194
Query: 179 KPQMTIVPEKSTTITAMRVVEDFIYLQCSSSMNSLQIWLRGAQHKVGRLSAGSKITSLL 3
KPQM++VP+K ++ AM +VEDFIYL CSSS + LQIWLRG Q K GRLSAGS+ITSLL
Sbjct: 1195 KPQMSMVPDKGASVLAMGIVEDFIYLNCSSSTSILQIWLRGTQQKAGRLSAGSRITSLL 1253
>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
Length = 1378
Score = 685 bits (1767), Expect = 0.0
Identities = 321/479 (67%), Positives = 395/479 (82%)
Frame = -1
Query: 1439 ESLLCDESPTTQKNAAITLSNLGGTYAWTGEPYTVAWLVKKAGLTSLHHKNMIRNIDWSD 1260
ES++C+E+ TQ +A LSNLGGTY+WTGEPYTVAWLVKKAGLTSL+H+NMIRN DW D
Sbjct: 840 ESMVCEENSATQILSAFILSNLGGTYSWTGEPYTVAWLVKKAGLTSLYHRNMIRNFDWLD 899
Query: 1259 QSIQDAGTDAWCTKIAKCIIKFGKPVFHTLKKGLESKSKSISRECLITTAWLGCEIVKTP 1080
QS+QD GTD WC+KI + IIK G P+FH L+KGL+SK + +SR+CL AWLG EI TP
Sbjct: 900 QSLQDTGTDTWCSKIGRSIIKGGIPLFHALEKGLKSKVRRVSRDCLTAIAWLGYEIATTP 959
Query: 1079 DDLRYTACEILLSSIEQYVHPGVELEERLLACLCIYNYASGRAMQKLVHFSEGVRESLRR 900
++LRY+ACEILLS IEQ++HPG++LEERLLACLC YNY SG+ MQKL+HFSEGVRESL R
Sbjct: 960 NELRYSACEILLSGIEQFLHPGLDLEERLLACLCXYNYTSGKGMQKLIHFSEGVRESLGR 1019
Query: 899 LSSISWMAEELLKVADYLQPDKWRISCVHTQLLEMGNNCSGAVNALIFFKGELYSGYADG 720
LS+I+WMAEELLK+ADY P K ISCVHTQ+LEMG CSGAV ALI+++G+L SGY+DG
Sbjct: 1020 LSNITWMAEELLKIADYFLPYKSXISCVHTQILEMGRKCSGAVTALIYYRGQLCSGYSDG 1079
Query: 719 SIKAWDVKGQSATLVRDIKVHKKAVTCFSLFEPQNCLLSGSADKTIRMWQMVEQKLECIQ 540
SIK WD+KGQSATLV DIK H+KAVTCFS FEP + LLSGSADKTIR+WQMV++K+EC +
Sbjct: 1080 SIKVWDIKGQSATLVLDIKEHRKAVTCFSHFEPGDSLLSGSADKTIRVWQMVKRKMECTE 1139
Query: 539 VIAAKSSVQRVDTSVNMIFVITHSNNMKVFDASKMDKEVYKKKNVKCINVKEGKYYLGCK 360
VI+ K VQ +DT +IF +TH + +KVFDAS+ K++ K K+VKC+ V +G+ Y+GC
Sbjct: 1140 VISTKEPVQNLDTHGQLIFTVTHGHGVKVFDASRKVKDICKSKHVKCVRVVQGRLYIGCM 1199
Query: 359 DSSIQEVALTNNRHQEMKAPSWSWRLQRKSINSIALYKDWLYSASSVVEGSPIKEWKRNG 180
DSSIQEV +T R QE++AP+ SWR+Q + INSI +YKDWLYSAS +VEGS KEWKR+
Sbjct: 1200 DSSIQEVVITRAREQEIRAPAKSWRMQNRPINSIVVYKDWLYSASDIVEGSNFKEWKRHS 1259
Query: 179 KPQMTIVPEKSTTITAMRVVEDFIYLQCSSSMNSLQIWLRGAQHKVGRLSAGSKITSLL 3
KPQM++VP+K ++ AM +VEDFIYL CSSS + LQIWLRG Q K GRLSAGS+ITSLL
Sbjct: 1260 KPQMSMVPDKGASVLAMGIVEDFIYLNCSSSTSILQIWLRGTQQKAGRLSAGSRITSLL 1318
>ref|XP_002516937.1| nucleotide binding protein, putative [Ricinus communis]
gi|223544025|gb|EEF45551.1| nucleotide binding protein,
putative [Ricinus communis]
Length = 1357
Score = 633 bits (1633), Expect = e-179
Identities = 303/479 (63%), Positives = 379/479 (79%)
Frame = -1
Query: 1439 ESLLCDESPTTQKNAAITLSNLGGTYAWTGEPYTVAWLVKKAGLTSLHHKNMIRNIDWSD 1260
+S+ +E+ Q+ + L+N+GGTY WTGEPYTVA LVKKAGLTSL+H+ MIRN+DWSD
Sbjct: 858 KSVASEENSALQQLSTFILANIGGTYTWTGEPYTVALLVKKAGLTSLYHRTMIRNVDWSD 917
Query: 1259 QSIQDAGTDAWCTKIAKCIIKFGKPVFHTLKKGLESKSKSISRECLITTAWLGCEIVKTP 1080
S+QDAG D+WC+KIAK II GKP F L+ GL S +K +SR+ L AW+GCEI K P
Sbjct: 918 PSLQDAGIDSWCSKIAKGIISIGKPAFQALESGLRSNTKRVSRDSLTAIAWIGCEIAKYP 977
Query: 1079 DDLRYTACEILLSSIEQYVHPGVELEERLLACLCIYNYASGRAMQKLVHFSEGVRESLRR 900
+ LR +ACEILL+ +EQ++HPG ELEERLLACLCIYNY SGR MQKL+HFSEGVRESLRR
Sbjct: 978 NSLRNSACEILLNGVEQFLHPGRELEERLLACLCIYNYTSGRGMQKLIHFSEGVRESLRR 1037
Query: 899 LSSISWMAEELLKVADYLQPDKWRISCVHTQLLEMGNNCSGAVNALIFFKGELYSGYADG 720
S ++WMAEEL +VA++ P+ RISCVHTQ+LE ++ SGAV ALI+F+G+LYSGY+DG
Sbjct: 1038 FSGVTWMAEELHRVAEFYLPNNSRISCVHTQVLETKHDRSGAVTALIYFRGQLYSGYSDG 1097
Query: 719 SIKAWDVKGQSATLVRDIKVHKKAVTCFSLFEPQNCLLSGSADKTIRMWQMVEQKLECIQ 540
SIK WD+K QSATLV D+K HKKAVTCFSLFE LLSGSADKTIR+WQMV +KLEC++
Sbjct: 1098 SIKVWDIKHQSATLVWDLKEHKKAVTCFSLFELGERLLSGSADKTIRVWQMVNRKLECVE 1157
Query: 539 VIAAKSSVQRVDTSVNMIFVITHSNNMKVFDASKMDKEVYKKKNVKCINVKEGKYYLGCK 360
VIA K +Q+++T +F+IT + MKV D+S+ K++ K K KC++ +GK Y+GC
Sbjct: 1158 VIAMKEPIQKIETYGQTMFIITQGHGMKVLDSSRTVKDLCKNKKFKCMSAVQGKLYIGCT 1217
Query: 359 DSSIQEVALTNNRHQEMKAPSWSWRLQRKSINSIALYKDWLYSASSVVEGSPIKEWKRNG 180
DSSIQE+ +TNNR +E+K P SW +Q K INSIAL+KDWLYSASS+VEGS +KE + +
Sbjct: 1218 DSSIQELTMTNNREREIKPPMKSWMMQNKPINSIALHKDWLYSASSIVEGSRVKELRTHS 1277
Query: 179 KPQMTIVPEKSTTITAMRVVEDFIYLQCSSSMNSLQIWLRGAQHKVGRLSAGSKITSLL 3
KPQM+I P+K I A+ VVEDFIYL CSSS ++LQIWLRG Q VGR+SAGSKITSLL
Sbjct: 1278 KPQMSIAPDKGRYILALGVVEDFIYLNCSSSTSTLQIWLRGTQQNVGRISAGSKITSLL 1336
>ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|222838614|gb|EEE76979.1|
predicted protein [Populus trichocarpa]
Length = 1305
Score = 619 bits (1595), Expect = e-175
Identities = 294/479 (61%), Positives = 379/479 (79%)
Frame = -1
Query: 1439 ESLLCDESPTTQKNAAITLSNLGGTYAWTGEPYTVAWLVKKAGLTSLHHKNMIRNIDWSD 1260
+S+ + S TQ+ +A +NLGGTYAWTGEPYTVAWLVKKAGLTSL H+NMIRN DW D
Sbjct: 806 KSVDSEVSSPTQQLSAFIFANLGGTYAWTGEPYTVAWLVKKAGLTSLCHRNMIRNYDWLD 865
Query: 1259 QSIQDAGTDAWCTKIAKCIIKFGKPVFHTLKKGLESKSKSISRECLITTAWLGCEIVKTP 1080
Q++QD D+W +KI K +I GKPVFH L+KGL SK+K +SR+ L AW+G EI + P
Sbjct: 866 QNLQDGVVDSWSSKIGKHVIDVGKPVFHALEKGLRSKAKRVSRDSLTAIAWIGFEIARCP 925
Query: 1079 DDLRYTACEILLSSIEQYVHPGVELEERLLACLCIYNYASGRAMQKLVHFSEGVRESLRR 900
LRY+ACEILL IEQ++HPG+ELEERLLACLCIYNYASGR MQKL+HFSEGVRESLRR
Sbjct: 926 TSLRYSACEILLGGIEQFLHPGLELEERLLACLCIYNYASGRGMQKLIHFSEGVRESLRR 985
Query: 899 LSSISWMAEELLKVADYLQPDKWRISCVHTQLLEMGNNCSGAVNALIFFKGELYSGYADG 720
S ++WMA+EL +VADY P++ RISCVHTQ+LE ++ SGA+ +LI++KG LYSG++DG
Sbjct: 986 FSGVTWMADELHRVADYYLPNQSRISCVHTQILEASDSSSGAITSLIYYKGLLYSGHSDG 1045
Query: 719 SIKAWDVKGQSATLVRDIKVHKKAVTCFSLFEPQNCLLSGSADKTIRMWQMVEQKLECIQ 540
SIK WD+K QSAT++ D+K HKKAVTCFSLFE LLSGS+DKTIR+W+MV++K EC +
Sbjct: 1046 SIKVWDIKQQSATIIWDLKEHKKAVTCFSLFEAGESLLSGSSDKTIRVWKMVQRKPECTE 1105
Query: 539 VIAAKSSVQRVDTSVNMIFVITHSNNMKVFDASKMDKEVYKKKNVKCINVKEGKYYLGCK 360
VIA + +++++ MIFVIT + MKV+D+S+ +++ K K VK + V +GK Y+GCK
Sbjct: 1106 VIAMEEPIRQLEKYDQMIFVITQGHRMKVYDSSRTARDICKAKKVKSMRVVQGKIYIGCK 1165
Query: 359 DSSIQEVALTNNRHQEMKAPSWSWRLQRKSINSIALYKDWLYSASSVVEGSPIKEWKRNG 180
DSSIQE+ + R QE+KAP+ SW +Q+K IN+I +Y+DWLYSASSV+EGS +KEW+ +
Sbjct: 1166 DSSIQELTIATKREQEIKAPTKSWIMQKKPINAIVVYRDWLYSASSVIEGSKVKEWRTHH 1225
Query: 179 KPQMTIVPEKSTTITAMRVVEDFIYLQCSSSMNSLQIWLRGAQHKVGRLSAGSKITSLL 3
KP+++I +K + M VVEDFIYL SSS ++LQIWLRG Q KVGR+SAGSKITSLL
Sbjct: 1226 KPRISIAADKGRNVLLMGVVEDFIYLNSSSSTSTLQIWLRGMQQKVGRISAGSKITSLL 1284