BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004727
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-li...    64   2e-16
emb|CAN64066.1| hypothetical protein VITISV_041736 [Vitis vinifera]    63   3e-15
gb|ADL36680.1| DOF domain class transcription factor [Malus x do...    59   7e-07
ref|XP_002317948.1| f-box family protein [Populus trichocarpa] g...    57   5e-06

>ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-like [Vitis vinifera]
          Length = 291

 Score = 64.3 bits (155), Expect(2) = 2e-16
 Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
 Frame = -2

Query: 463 EDNRRSDEVQQMHDMASGGYLDQTVQIESG---NRISNVDVAGVEWQSGGVNNDQDEGIF 293
           +  + SDE++     A  G+LDQTVQ+E     NR ++     ++WQ+ G     D+GIF
Sbjct: 213 QQQKMSDELKMQEITA--GFLDQTVQVELSALQNRSNHGGFPSLDWQTSG-----DQGIF 265

Query: 292 DLTGTVDQAYWSQPQWPDHHSDHSTFHYLP 203
           DL G VDQ YW+Q QW D  +DH    YLP
Sbjct: 266 DLPGNVDQGYWTQSQWSD--NDHPL--YLP 291



 Score = 47.0 bits (110), Expect(2) = 2e-16
 Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
 Frame = -3

Query: 693 IDHASDGGGSMFPEIGRFTEMMT---SPADIGFTVADVSAFRSENQ 565
           +DH+SDG  ++FPEIG FT +MT    PA +GF ++D+S F+ + Q
Sbjct: 160 LDHSSDG--NIFPEIGSFTSLMTGSNDPAALGFNISDISPFKYQEQ 203


>emb|CAN64066.1| hypothetical protein VITISV_041736 [Vitis vinifera]
          Length = 286

 Score = 63.2 bits (152), Expect(2) = 3e-15
 Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
 Frame = -2

Query: 463 EDNRRSDEVQQMHDMASGGYLDQTVQIESG---NRISNVDVAGVEWQSGGVNNDQDEGIF 293
           +  + SDE++      S G+LDQ VQ+E     NR ++     ++WQ+ G     D+GIF
Sbjct: 208 QQQKMSDELKMQE--ISAGFLDQIVQVELSALQNRSNHGGFPSLDWQTSG-----DQGIF 260

Query: 292 DLTGTVDQAYWSQPQWPDHHSDHSTFHYLP 203
           DL G VDQ YW+Q QW D  +DH    YLP
Sbjct: 261 DLPGNVDQGYWTQSQWSD--NDHPL--YLP 286



 Score = 44.7 bits (104), Expect(2) = 3e-15
 Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
 Frame = -3

Query: 693 IDHASDGGGSMFPEIGRFTEMMT---SPADIGFTVADVSAFRSENQ 565
           +DH+SD   ++FPEIG FT +MT    PA +GF ++D+S F+ + Q
Sbjct: 155 LDHSSDS--NIFPEIGSFTSLMTGSNDPAALGFNISDISPFKYQEQ 198


>gb|ADL36680.1| DOF domain class transcription factor [Malus x domestica]
          Length = 520

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
 Frame = -2

Query: 415 SGGYLDQTVQIE-----SGNRISNVDVAGVEWQSGGVNNDQDEGIFDLTGTVDQAYWSQP 251
           SGG LDQT Q++     + + +       ++WQ G      D+G+FDL  TVDQAYWS  
Sbjct: 452 SGGLLDQTAQVDLSVFQNRSHVGGGGFGSLDWQPGS----GDQGLFDLPNTVDQAYWSHS 507

Query: 250 QWPDHHSDHSTFHYLP 203
           QW D   DH T  YLP
Sbjct: 508 QWTD--QDHPTL-YLP 520


>ref|XP_002317948.1| f-box family protein [Populus trichocarpa]
           gi|222858621|gb|EEE96168.1| f-box family protein
           [Populus trichocarpa]
          Length = 329

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
 Frame = -2

Query: 469 NDEDNRRSDEVQQMHDMASGGYLDQTVQIE-----SGNRISNVD--VAGVEWQSGGVNND 311
           ++++ ++    QQ      GG +DQTV +E     S     N D     ++WQ G  + D
Sbjct: 239 HNQNQQQWQNHQQQEMTGGGGLIDQTVHVELSALPSSRSTKNDDGEFGALDWQLG--SGD 296

Query: 310 QDEGIFDLTGTVDQAYWSQPQWPDHHSDHSTFHYLP 203
           Q   +FDL   VDQAYWSQ QW D   DH +  Y+P
Sbjct: 297 QATSLFDLPNAVDQAYWSQSQWND--QDHPSL-YIP 329