BLASTX nr result

ID: Bupleurum21_contig00004708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004708
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316461.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002311923.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_003633510.1| PREDICTED: uncharacterized protein LOC100853...    62   4e-08
emb|CBI29090.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_001348348.1| conserved Plasmodium protein, unknown functi...    60   2e-07

>ref|XP_002316461.1| predicted protein [Populus trichocarpa] gi|222865501|gb|EEF02632.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 63/192 (32%), Positives = 91/192 (47%), Gaps = 20/192 (10%)
 Frame = +2

Query: 20  MRPVFN---PQSNQVQTNGTPASAPQPQVMESNKKFQTNPINLLPQIQSQMGLINPQTPS 190
           M P FN   P+ ++ + N  P +          + F  NP +L   +Q Q+GL+NPQ P 
Sbjct: 1   MEPFFNSRRPRHHKQKGNTAPYN---------QQGFSANP-SLTNSMQPQLGLVNPQIPI 50

Query: 191 PFSNPNTQLAN--MNPSFLNVPNQFFQNGM------FPLGQFPNGFGPQNLNNMGMNQFN 346
           PF+N NT L N    P+   + NQ  Q+G+        + Q  N     N   M MNQ N
Sbjct: 51  PFNNSNTPLRNGQAMPNMPPLINQ--QHGLVSGPNDLAILQLQNQVNKLNALKMLMNQVN 108

Query: 347 MSQLNGQIFTPNVMNQGVSLPNGQFFMQNPLQNMGQFV---QVPM------LNVPFIQNQ 499
             QL G++F P   N    +      +QNP+QNM   V   Q+PM       NVP   ++
Sbjct: 109 --QLQGELFGPGFSNLPQQINQNMGLLQNPMQNMMNPVMPMQMPMTSQVGSFNVP---SR 163

Query: 500 ASQIRGPQNPSF 535
           + Q+ G Q+P+F
Sbjct: 164 SHQVVGAQSPNF 175


>ref|XP_002311923.1| predicted protein [Populus trichocarpa] gi|222851743|gb|EEE89290.1|
           predicted protein [Populus trichocarpa]
          Length = 659

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 60/190 (31%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
 Frame = +2

Query: 20  MRPVFN---PQSNQVQTNGTPASAPQPQVMESNKKFQTNPINLLPQIQSQMGLINPQTPS 190
           M+P FN   P+ ++ + N  P +    QV  +N+       N +P +Q Q+GL+NPQ P 
Sbjct: 1   MKPFFNSRRPKHHKQKGNTAPLNQ---QVFSTNQSVA----NSMP-MQPQLGLVNPQIPI 52

Query: 191 PFSNPNTQL------ANMNPSFLNVPNQFFQNGMFPLGQFPNGFGPQNLNNMGMNQFNMS 352
            F+N NT L      ANM P     P          + Q  N     N   M M+Q N  
Sbjct: 53  TFNNSNTLLSNGQAMANMPPLIAQQPGILSGPNDLAILQLQNQVNKLNALKMLMDQVN-- 110

Query: 353 QLNGQIFTPNVMNQGVSLPNGQFFMQNPLQNMGQFV---------QVPMLNVPFIQNQAS 505
           QL G++F P+  N    L      +QNP+QNM   V         QV   NVP   +   
Sbjct: 111 QLQGELFGPSFSNLPQQLNQNMGLLQNPMQNMMNPVMPLQMPINSQVGSFNVP---SSNH 167

Query: 506 QIRGPQNPSF 535
           Q+ G Q+ +F
Sbjct: 168 QVVGAQSQNF 177


>ref|XP_003633510.1| PREDICTED: uncharacterized protein LOC100853835 [Vitis vinifera]
          Length = 250

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 66/188 (35%), Positives = 81/188 (43%), Gaps = 13/188 (6%)
 Frame = +2

Query: 20  MRPVFNPQSNQVQTNGTPASAPQPQVMESNKKFQTNPINLLPQIQSQMGLINPQTPSPFS 199
           M P+FNP        GT   A Q QV  SN     NP   LP    QMG++NPQT  PF 
Sbjct: 1   MLPLFNPFL------GTTPPASQQQVPPSNPGSHVNPTGALPN-PLQMGMLNPQTSIPF- 52

Query: 200 NPNTQLANMNPSFLNVPNQFFQNGMFPLG---QFPNGFGPQN-LNNMGMNQF--NMSQLN 361
                + NM   F  +P Q    GM  LG        F PQN + N+G + +  N SQ  
Sbjct: 53  -----IPNMPNQFGFMPLQNNHLGMPHLGSAQSHQGSFNPQNCVPNLGQSAYRSNPSQPP 107

Query: 362 GQIFTPNVMNQGVSLPNGQFFMQNPLQN----MGQFVQVPMLNVPFIQN---QASQIRGP 520
             +F     N  +   N QF +QN  QN    M    QV   NVP   +   Q +Q  GP
Sbjct: 108 ANLFG---HNSAILPGNLQFCLQNMNQNFPMPMPNLNQVGPYNVPQASHHMFQLAQALGP 164

Query: 521 QNPSFNGN 544
           Q+  F  N
Sbjct: 165 QSSGFIPN 172


>emb|CBI29090.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 66/188 (35%), Positives = 81/188 (43%), Gaps = 13/188 (6%)
 Frame = +2

Query: 20  MRPVFNPQSNQVQTNGTPASAPQPQVMESNKKFQTNPINLLPQIQSQMGLINPQTPSPFS 199
           M P+FNP        GT   A Q QV  SN     NP   LP    QMG++NPQT  PF 
Sbjct: 1   MLPLFNPFL------GTTPPASQQQVPPSNPGSHVNPTGALPN-PLQMGMLNPQTSIPF- 52

Query: 200 NPNTQLANMNPSFLNVPNQFFQNGMFPLG---QFPNGFGPQN-LNNMGMNQF--NMSQLN 361
                + NM   F  +P Q    GM  LG        F PQN + N+G + +  N SQ  
Sbjct: 53  -----IPNMPNQFGFMPLQNNHLGMPHLGSAQSHQGSFNPQNCVPNLGQSAYRSNPSQPP 107

Query: 362 GQIFTPNVMNQGVSLPNGQFFMQNPLQN----MGQFVQVPMLNVPFIQN---QASQIRGP 520
             +F     N  +   N QF +QN  QN    M    QV   NVP   +   Q +Q  GP
Sbjct: 108 ANLFG---HNSAILPGNLQFCLQNMNQNFPMPMPNLNQVGPYNVPQASHHMFQLAQALGP 164

Query: 521 QNPSFNGN 544
           Q+  F  N
Sbjct: 165 QSSGFIPN 172


>ref|XP_001348348.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
            3D7] gi|74864292|sp|Q8ILR9.1|YPF17_PLAF7 RecName:
            Full=Protein PF14_0175 gi|23497240|gb|AAN36787.1|
            conserved Plasmodium protein, unknown function
            [Plasmodium falciparum 3D7]
          Length = 4662

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 58/193 (30%), Positives = 79/193 (40%), Gaps = 22/193 (11%)
 Frame = +2

Query: 32   FNPQSNQVQT----NGTPASAPQPQVMESNKKFQTNPINLLPQIQSQMGL-INPQTPSPF 196
            +N Q N VQT    NG   +   P   +SN     NP+N L Q+ ++     N Q  +  
Sbjct: 3859 YNTQGNNVQTMNQSNGNVYNVNVPNRKQSNLNQYVNPMNFLIQVLNKCNSNTNGQVKASA 3918

Query: 197  SNPNTQLANMNPSFLNVPN----QFFQNGMFPLGQF-PN----GFGPQNLNNMGMNQFNM 349
            SN N   AN+N + LN PN       Q  +  +G   PN    G    N+NN+GMNQ N+
Sbjct: 3919 SNANVNYANVNSTSLNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNI 3978

Query: 350  SQL--------NGQIFTPNVMNQGVSLPNGQFFMQNPLQNMGQFVQVPMLNVPFIQNQAS 505
            + +        N  +  PN+ N  ++ PN   F  N   N   F         F  NQ S
Sbjct: 3979 NNVSMNQPNINNVNMNQPNINNVSMNQPNINNFSMNQ-SNTNNFNMNKPSTSSFSMNQPS 4037

Query: 506  QIRGPQNPSFNGN 544
                  N S   N
Sbjct: 4038 TNNFSMNKSSTNN 4050


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