BLASTX nr result

ID: Bupleurum21_contig00004704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004704
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP23938.1| one helix protein [Ipomoea nil]                        142   2e-32
gb|AFK45078.1| unknown [Lotus japonicus]                              141   7e-32
gb|AFK33575.1| unknown [Lotus japonicus]                              141   7e-32
ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]...   139   4e-31
ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263...   137   1e-30

>gb|AAP23938.1| one helix protein [Ipomoea nil]
          Length = 116

 Score =  142 bits (359), Expect = 2e-32
 Identities = 71/108 (65%), Positives = 89/108 (82%), Gaps = 2/108 (1%)
 Frame = +3

Query: 39  SSFLPTTQTLLHQSNQMYVLHNRIGST--NKKKLLSFRIQAAKLPAGVELPKVQPQFKAP 212
           SSFL  + T   Q NQ++   NRI ++  + K + SF++QAAKLPAGVELPK QP+ + P
Sbjct: 7   SSFLSLSTTHTPQHNQLFFFTNRIHTSTISHKPISSFKLQAAKLPAGVELPKEQPKLEPP 66

Query: 213 FLGFTRTAEIWNSRACMIGLIGTFIVELIINKGILEVIGVEIGKGLDI 356
           FLGFTRTAEIWNSRACMIGLIGTFIVELI+N+GIL++IGV++GKGLD+
Sbjct: 67  FLGFTRTAEIWNSRACMIGLIGTFIVELILNRGILQLIGVDVGKGLDL 114


>gb|AFK45078.1| unknown [Lotus japonicus]
          Length = 112

 Score =  141 bits (355), Expect = 7e-32
 Identities = 72/110 (65%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
 Frame = +3

Query: 30  MAMSSFLPTTQTLLHQSNQMYVLHNRIGSTNKKKLLSFRIQAA-KLPAGVELPKVQPQFK 206
           MA SS +  +    + +NQ   L+      NK ++  FR+QAA K PAG E PKVQPQFK
Sbjct: 1   MATSSIILRSSLSFYSTNQQVYLNRSATHKNKNRVSFFRVQAAAKPPAGAEFPKVQPQFK 60

Query: 207 APFLGFTRTAEIWNSRACMIGLIGTFIVELIINKGILEVIGVEIGKGLDI 356
           APFLGFT+TAE+WNSRACMIGLIGTFIVELIINKGIL+VIGVEIGKGL++
Sbjct: 61  APFLGFTKTAEVWNSRACMIGLIGTFIVELIINKGILQVIGVEIGKGLNL 110


>gb|AFK33575.1| unknown [Lotus japonicus]
          Length = 112

 Score =  141 bits (355), Expect = 7e-32
 Identities = 73/110 (66%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
 Frame = +3

Query: 30  MAMSSFLPTTQTLLHQSNQMYVLHNRIGSTNKKKLLSFRIQAA-KLPAGVELPKVQPQFK 206
           MA SS +  +    + +NQ   L+      NK  +  FR+QAA K PAGVE PKVQPQFK
Sbjct: 1   MATSSIILRSSLSFYSTNQQVYLNRSATHKNKNGVSFFRVQAAAKPPAGVEFPKVQPQFK 60

Query: 207 APFLGFTRTAEIWNSRACMIGLIGTFIVELIINKGILEVIGVEIGKGLDI 356
           APFLGFT+TAE+WNSRACMIGLIGTFIVELIINKGIL+VIGVEIGKGL++
Sbjct: 61  APFLGFTKTAEVWNSRACMIGLIGTFIVELIINKGILQVIGVEIGKGLNL 110


>ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]
           gi|222855050|gb|EEE92597.1| HLIP/One helix protein
           [Populus trichocarpa]
          Length = 119

 Score =  139 bits (349), Expect = 4e-31
 Identities = 74/112 (66%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
 Frame = +3

Query: 30  MAMSSFLPTTQTLLHQSNQMYVLHN---RIGSTNKKKLLSFRIQAAKLPAGVELPKVQPQ 200
           ++ SS L T    LH  N    L N   +I  T+K+ +  FRIQAAKLP GVELPKV+P+
Sbjct: 8   LSSSSLLLTKPVTLHPRNGKVSLFNHRSQIIKTSKEPV--FRIQAAKLPPGVELPKVEPK 65

Query: 201 FKAPFLGFTRTAEIWNSRACMIGLIGTFIVELIINKGILEVIGVEIGKGLDI 356
           F+APFLGFTRTAEIWNSRACM+GLIG F+VELIINKGIL+VIGV+IGKGLD+
Sbjct: 66  FQAPFLGFTRTAEIWNSRACMMGLIGVFVVELIINKGILQVIGVDIGKGLDL 117


>ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263187 [Vitis vinifera]
           gi|297740337|emb|CBI30519.3| unnamed protein product
           [Vitis vinifera]
          Length = 121

 Score =  137 bits (345), Expect = 1e-30
 Identities = 71/109 (65%), Positives = 84/109 (77%), Gaps = 4/109 (3%)
 Frame = +3

Query: 42  SFLPTTQTLLHQSNQMYVLHNRIGS----TNKKKLLSFRIQAAKLPAGVELPKVQPQFKA 209
           S LP +  ++   NQ     N        +  KK +SFR+QAAKLP GVELPKV+P+F+A
Sbjct: 11  SVLPRSAPIVSLLNQQLSPFNHRSPCSTISQPKKKVSFRVQAAKLPPGVELPKVEPKFEA 70

Query: 210 PFLGFTRTAEIWNSRACMIGLIGTFIVELIINKGILEVIGVEIGKGLDI 356
           PFLGFTRTAEIWNSRACMIGLIG FIVELI+NKGIL+VIGV+IGKGLD+
Sbjct: 71  PFLGFTRTAEIWNSRACMIGLIGIFIVELILNKGILQVIGVDIGKGLDL 119


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