BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004688
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vini...   401   e-109
ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sa...   386   e-105
ref|XP_002530572.1| DNA polymerase I, putative [Ricinus communis...   383   e-104
ref|XP_002330658.1| predicted protein [Populus trichocarpa] gi|2...   375   e-102
ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis tha...   374   e-101

>ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
           gi|296084279|emb|CBI24667.3| unnamed protein product
           [Vitis vinifera]
          Length = 441

 Score =  401 bits (1030), Expect = e-109
 Identities = 201/238 (84%), Positives = 217/238 (91%)
 Frame = +1

Query: 1   LNFRHTLYPDYKSNRSPTPDTVVQGLQYLKASLKAMSVKVIEVPGVEADDVIGTLASRSV 180
           LNFRHTLYP YKSNR PTPDT+VQGLQYLKAS+KAMS+KVIEVPGVEADDVIGTL+ RSV
Sbjct: 196 LNFRHTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEVPGVEADDVIGTLSVRSV 255

Query: 181 SDGFKVRVVSPDKDFFQILSPSLRLLRIAPRGLEMASFGIEDFAKKYGTLRPSQFVDIIS 360
             G+KVRVVSPDKDFFQILSPSLRLLRIAPRG EM SFG+EDFAK+YG L PSQFVD+IS
Sbjct: 256 DAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGFEMTSFGMEDFAKRYGNLEPSQFVDVIS 315

Query: 361 LVGDKADNIPGVDGIGNVHAVQLITRFGTLENLLDNVDQVEQERIRKALISNAEEAKLSK 540
           LVGDK+DNIPGV+GIGNVHAVQLIT+FGTLENLL  VDQV++ERIRKALIS A++A LSK
Sbjct: 316 LVGDKSDNIPGVEGIGNVHAVQLITKFGTLENLLQCVDQVQEERIRKALISGADQAVLSK 375

Query: 541 NLALLRSDLPFYMVPFATTDLKFQKPEDNGEKFTSLLTAISAYAEGFSADTVIRRALY 714
           NLALLR DLPFYMVPF T DL F KPEDNGEKFTSLL AISAYAEGFSAD +IRRA Y
Sbjct: 376 NLALLRCDLPFYMVPFTTEDLIFTKPEDNGEKFTSLLNAISAYAEGFSADPIIRRAFY 433


>ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sativus]
          Length = 461

 Score =  386 bits (991), Expect = e-105
 Identities = 194/236 (82%), Positives = 215/236 (91%)
 Frame = +1

Query: 7   FRHTLYPDYKSNRSPTPDTVVQGLQYLKASLKAMSVKVIEVPGVEADDVIGTLASRSVSD 186
           FRHT+YP YKSNR+PTPDTVVQGLQYLKAS+K+MS+KVIEVPGVEADDVIGTLA RSV+ 
Sbjct: 218 FRHTIYPAYKSNRAPTPDTVVQGLQYLKASIKSMSIKVIEVPGVEADDVIGTLALRSVAV 277

Query: 187 GFKVRVVSPDKDFFQILSPSLRLLRIAPRGLEMASFGIEDFAKKYGTLRPSQFVDIISLV 366
           G KVRVVSPDKDFFQILSPSLRLLRIA RG+EM SFG+EDFA K+G L PSQFVD++SLV
Sbjct: 278 GCKVRVVSPDKDFFQILSPSLRLLRIASRGIEMVSFGLEDFADKFGVLEPSQFVDVMSLV 337

Query: 367 GDKADNIPGVDGIGNVHAVQLITRFGTLENLLDNVDQVEQERIRKALISNAEEAKLSKNL 546
           GDK+DNIPGVDGIGNV+AVQLITRFGTLENLL +VDQVE ERI+K L++NAE+A LSK+L
Sbjct: 338 GDKSDNIPGVDGIGNVNAVQLITRFGTLENLLQHVDQVEDERIKKMLVTNAEQAILSKDL 397

Query: 547 ALLRSDLPFYMVPFATTDLKFQKPEDNGEKFTSLLTAISAYAEGFSADTVIRRALY 714
           A LRSDLPFYMVPF T DL F+KPEDNGEKFTSLLTAI AYAE FSAD +IRR LY
Sbjct: 398 ATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLY 453


>ref|XP_002530572.1| DNA polymerase I, putative [Ricinus communis]
           gi|223529871|gb|EEF31802.1| DNA polymerase I, putative
           [Ricinus communis]
          Length = 246

 Score =  383 bits (984), Expect = e-104
 Identities = 188/238 (78%), Positives = 218/238 (91%)
 Frame = +1

Query: 1   LNFRHTLYPDYKSNRSPTPDTVVQGLQYLKASLKAMSVKVIEVPGVEADDVIGTLASRSV 180
           +NFRHTLYP YKSNR PTPDT++QGLQYLKAS++AMS+KVIEVPGVEADDVIGTLA+RSV
Sbjct: 1   MNFRHTLYPSYKSNRPPTPDTIIQGLQYLKASIRAMSIKVIEVPGVEADDVIGTLATRSV 60

Query: 181 SDGFKVRVVSPDKDFFQILSPSLRLLRIAPRGLEMASFGIEDFAKKYGTLRPSQFVDIIS 360
             GFKVRVVSPDKDFFQILSPSLRLLRIAPRG EM SFG+EDFAK YG LRPSQFVD+++
Sbjct: 61  DAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFEMVSFGMEDFAKLYGELRPSQFVDVMA 120

Query: 361 LVGDKADNIPGVDGIGNVHAVQLITRFGTLENLLDNVDQVEQERIRKALISNAEEAKLSK 540
           L+GDK+DNIPGV+GIG V+AV+LIT+FGTLENLL+ VD+VE +RIR+AL +NA++A LSK
Sbjct: 121 LMGDKSDNIPGVEGIGTVYAVELITKFGTLENLLECVDKVEGQRIREALKANADQAVLSK 180

Query: 541 NLALLRSDLPFYMVPFATTDLKFQKPEDNGEKFTSLLTAISAYAEGFSADTVIRRALY 714
           NLALLRSDLPFYMVPF+T D  F+KPED+GEKF +LL AIS YA+GFSAD +IRRALY
Sbjct: 181 NLALLRSDLPFYMVPFSTKDFTFEKPEDDGEKFMNLLNAISVYAKGFSADPIIRRALY 238


>ref|XP_002330658.1| predicted protein [Populus trichocarpa] gi|222872262|gb|EEF09393.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  375 bits (963), Expect = e-102
 Identities = 191/236 (80%), Positives = 212/236 (89%)
 Frame = +1

Query: 1   LNFRHTLYPDYKSNRSPTPDTVVQGLQYLKASLKAMSVKVIEVPGVEADDVIGTLASRSV 180
           LNFRHTLY  YKSNR PTPDTV+QGL YLKA++KAMSVKVIEVPGVEADDVIGTLA  SV
Sbjct: 65  LNFRHTLYSLYKSNRPPTPDTVIQGLPYLKAAIKAMSVKVIEVPGVEADDVIGTLAVNSV 124

Query: 181 SDGFKVRVVSPDKDFFQILSPSLRLLRIAPRGLEMASFGIEDFAKKYGTLRPSQFVDIIS 360
            DGFKVRVVSPDKDFFQILSPSLRLLRIAPRGLEM SFG+EDFA+KYG L+PSQFVD+++
Sbjct: 125 KDGFKVRVVSPDKDFFQILSPSLRLLRIAPRGLEMVSFGMEDFAEKYGGLKPSQFVDVMA 184

Query: 361 LVGDKADNIPGVDGIGNVHAVQLITRFGTLENLLDNVDQVEQERIRKALISNAEEAKLSK 540
           L+GDK+DNIPGV+GIG VHAV+LI+RFGTLENLL  VDQVE E IRKAL  NA +A LSK
Sbjct: 185 LMGDKSDNIPGVEGIGVVHAVELISRFGTLENLLKCVDQVEGESIRKALRQNANQAVLSK 244

Query: 541 NLALLRSDLPFYMVPFATTDLKFQKPEDNGEKFTSLLTAISAYAEGFSADTVIRRA 708
            LA LR +LP YMVPFATTDL F+KPEDNGEKFT+LLTA+S+YAEGFSAD +IRRA
Sbjct: 245 ELAKLRCELPEYMVPFATTDLIFKKPEDNGEKFTNLLTAVSSYAEGFSADMIIRRA 300


>ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
           gi|145362483|ref|NP_974414.2| 5'-3' exonuclease-like
           protein [Arabidopsis thaliana]
           gi|109946597|gb|ABG48477.1| At3g52050 [Arabidopsis
           thaliana] gi|332645358|gb|AEE78879.1| 5'-3'
           exonuclease-like protein [Arabidopsis thaliana]
           gi|332645359|gb|AEE78880.1| 5'-3' exonuclease-like
           protein [Arabidopsis thaliana]
          Length = 425

 Score =  374 bits (960), Expect = e-101
 Identities = 185/236 (78%), Positives = 215/236 (91%)
 Frame = +1

Query: 1   LNFRHTLYPDYKSNRSPTPDTVVQGLQYLKASLKAMSVKVIEVPGVEADDVIGTLASRSV 180
           +NFRHTLYP YKSNR PTPDT+VQGLQYLKAS+KAMS+KVIEVPGVEADDVIGTLA RS+
Sbjct: 179 MNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEVPGVEADDVIGTLAMRSI 238

Query: 181 SDGFKVRVVSPDKDFFQILSPSLRLLRIAPRGLEMASFGIEDFAKKYGTLRPSQFVDIIS 360
           S GFKVRVVSPDKDFFQILSPSLRLLR+ PRG EMASFG+EDFAKK+G L P+QFVDII+
Sbjct: 239 SAGFKVRVVSPDKDFFQILSPSLRLLRLTPRGSEMASFGMEDFAKKFGNLEPAQFVDIIA 298

Query: 361 LVGDKADNIPGVDGIGNVHAVQLITRFGTLENLLDNVDQVEQERIRKALISNAEEAKLSK 540
           L GDK+DNIPGVDGIGNVHAV+LI+RFGTLENLL +VD++++ +I+++LI++A++A LSK
Sbjct: 299 LAGDKSDNIPGVDGIGNVHAVELISRFGTLENLLQSVDEIKEGKIKESLIASADQAILSK 358

Query: 541 NLALLRSDLPFYMVPFATTDLKFQKPEDNGEKFTSLLTAISAYAEGFSADTVIRRA 708
            LALLRSDLP Y+VPF T DL F+KPEDNGEK +SLL AI+ YAEGFSAD VIRRA
Sbjct: 359 KLALLRSDLPDYIVPFDTKDLTFKKPEDNGEKLSSLLIAIADYAEGFSADPVIRRA 414