BLASTX nr result

ID: Bupleurum21_contig00004672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004672
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277568.1| PREDICTED: uncharacterized protein LOC100257...    80   3e-13
ref|XP_002531198.1| conserved hypothetical protein [Ricinus comm...    73   5e-11
ref|XP_004156398.1| PREDICTED: uncharacterized LOC101212909 [Cuc...    72   1e-10
ref|XP_004151087.1| PREDICTED: uncharacterized protein LOC101212...    72   1e-10
ref|XP_002518401.1| conserved hypothetical protein [Ricinus comm...    70   3e-10

>ref|XP_002277568.1| PREDICTED: uncharacterized protein LOC100257277 [Vitis vinifera]
           gi|297737495|emb|CBI26696.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
 Frame = -1

Query: 647 VFTGPVRKWKKQWVXXXXXXXXXXXXXXXXXXXXS------LLLCRWTPVSGTD--NSSG 492
           VF GPVR+WKK+WV                    +      LLLC+WTP++  D   S G
Sbjct: 20  VFNGPVRRWKKKWVHVSSSSSSTVSYHNSQFNGHNSNTGSRLLLCKWTPLTSGDAERSFG 79

Query: 491 KTDNELPRRKFRYAPIVVVDEMKMEVDKKAKDEVVTTKTFRSSQRESAKNDGIFRKQDID 312
           K + E PRRKFRY P+ V++E K E  +KA+  V  +   +S+ R ++K DG   K +I+
Sbjct: 80  KPE-EPPRRKFRYTPVSVLEEQKKEAARKAEGGVQASNN-QSTTRPTSKIDGFDGKFNIN 137

Query: 311 SLFMEVSQAS 282
           ++ ME S+AS
Sbjct: 138 NILMEESEAS 147


>ref|XP_002531198.1| conserved hypothetical protein [Ricinus communis]
           gi|223529200|gb|EEF31175.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 192

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
 Frame = -1

Query: 647 VFTGPVRKWKKQWVXXXXXXXXXXXXXXXXXXXXS---------LLLCRWTPVS---GTD 504
           VF GPVRKWKK+WV                    +         LLLCRWTP+S    TD
Sbjct: 23  VFNGPVRKWKKKWVHVGPSSSSTGNHQNSRSNAHAHNNNNNNSRLLLCRWTPLSPSTATD 82

Query: 503 NSSGKTDNELPRRKFRYAPIVVVDEMKMEVDKKAKDEVVTTKTFRSSQRESAKNDGIFRK 324
            +S  +  E P+RKFRY PI V++E K +  +K  +E   + T +S+  E+ KND +   
Sbjct: 83  GASSSSSEEPPKRKFRYTPIAVLEERK-KAAEKVDNEGNASGTDQSTALETPKNDELNSD 141

Query: 323 QDI 315
            D+
Sbjct: 142 SDL 144


>ref|XP_004156398.1| PREDICTED: uncharacterized LOC101212909 [Cucumis sativus]
          Length = 238

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
 Frame = -1

Query: 647 VFTGPVRKWKKQWVXXXXXXXXXXXXXXXXXXXXS--LLLCRWTPV-----SGTDNSSGK 489
           VF GPVRKWKK+WV                    +  LLLCRWTP+     S  D ++  
Sbjct: 76  VFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLLCRWTPIHPPTSSEADEATAP 135

Query: 488 TDNELPRRKFRYAPIVVVDEMKMEVDKKAKDEVVTTKTFRSSQRESAKNDGIFRKQDIDS 309
            D E P+RKFRY PI V++E K    +  KDEV   +  + + + +   +    + +++ 
Sbjct: 136 PD-EPPKRKFRYTPIAVLEEQKSAELRSVKDEVRMKEMDQLAAKTATVGNEALGELNVNE 194

Query: 308 LFMEVSQASRNDQDDNSDG 252
           +F E +Q +  + +   DG
Sbjct: 195 IFKEETQETSKNLNSPRDG 213


>ref|XP_004151087.1| PREDICTED: uncharacterized protein LOC101212909 [Cucumis sativus]
          Length = 183

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
 Frame = -1

Query: 647 VFTGPVRKWKKQWVXXXXXXXXXXXXXXXXXXXXS--LLLCRWTPV-----SGTDNSSGK 489
           VF GPVRKWKK+WV                    +  LLLCRWTP+     S  D ++  
Sbjct: 21  VFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLLCRWTPIHPPTSSEADEATAP 80

Query: 488 TDNELPRRKFRYAPIVVVDEMKMEVDKKAKDEVVTTKTFRSSQRESAKNDGIFRKQDIDS 309
            D E P+RKFRY PI V++E K    +  KDEV   +  + + + +   +    + +++ 
Sbjct: 81  PD-EPPKRKFRYTPIAVLEEQKSAELRSVKDEVRMKEMDQLAAKTATVGNEALGELNVNE 139

Query: 308 LFMEVSQASRNDQDDNSDG 252
           +F E +Q +  + +   DG
Sbjct: 140 IFKEETQETSKNLNSPRDG 158


>ref|XP_002518401.1| conserved hypothetical protein [Ricinus communis]
           gi|223542246|gb|EEF43788.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 208

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 22/148 (14%)
 Frame = -1

Query: 647 VFTGPVRKWKKQWVXXXXXXXXXXXXXXXXXXXXS-------LLLCRWTPVS-------- 513
           VF+GPVRKWKK+WV                    S       LLL +WTP S        
Sbjct: 20  VFSGPVRKWKKRWVHVSPSSNHNHSHNHNHNNSSSNGNNGSHLLLYKWTPSSQSQSQSQS 79

Query: 512 -GTDNSSGKTDN------ELPRRKFRYAPIVVVDEMKMEVDKKAKDEVVTTKTFRSSQRE 354
               NS+ K D+      E PRRKF+Y P+ ++++ K EV +KA+DE   +    +++  
Sbjct: 80  NNNSNSNHKNDDPPLLPDEPPRRKFKYIPVYLLEKQKNEVAEKAEDEAKQSDAEVAAEPI 139

Query: 353 SAKNDGIFRKQDIDSLFMEVSQASRNDQ 270
           S K+DG   K DI+ + ME +Q+  ++Q
Sbjct: 140 S-KDDGFDEKPDINDIPMEETQSQGDNQ 166


Top