BLASTX nr result

ID: Bupleurum21_contig00004623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004623
         (1199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234168.1| GRAS2 protein [Solanum lycopersicum] gi|8947...   566   e-173
ref|XP_002317558.1| GRAS family transcription factor [Populus tr...   567   e-173
ref|XP_002282942.1| PREDICTED: chitin-inducible gibberellin-resp...   564   e-173
ref|XP_002319796.1| GRAS family transcription factor [Populus tr...   574   e-173
ref|XP_002334777.1| GRAS family transcription factor [Populus tr...   574   e-173

>ref|NP_001234168.1| GRAS2 protein [Solanum lycopersicum] gi|89474464|gb|ABD72959.1| GRAS2
            [Solanum lycopersicum]
          Length = 583

 Score =  567 bits (1460), Expect(2) = e-173
 Identities = 277/330 (83%), Positives = 298/330 (90%)
 Frame = +2

Query: 203  GAYMIEGLVARKEESGHNIYRALRCREPEGKDLLSYMHILYEICPYLKFGYMAANGAIAE 382
            GAY++EGLVARKE SG NIYRALRC+EP G DLLSYMHILYEICPYLKFGYMAANGAIA+
Sbjct: 254  GAYIVEGLVARKEASGTNIYRALRCKEPAGWDLLSYMHILYEICPYLKFGYMAANGAIAD 313

Query: 383  ACRNEDRIHIIDFQIAQGTQWMTLLQALAARPIGAPHVRITGIDDPVSKYARGDSLEAVG 562
            ACRNE+RIHIIDFQIAQGTQW+TLLQALAARP GAP+VRITGIDDPVSKYARGD L  VG
Sbjct: 314  ACRNENRIHIIDFQIAQGTQWLTLLQALAARPSGAPYVRITGIDDPVSKYARGDGLAVVG 373

Query: 563  KRLQALSEKFNIPVEFHAMPVFAPDVTKDMLMVRPGEALVVNFPLQLHHTPDESVDVNNP 742
            K+L A+SEKFNIPVEFHA+PVFAP+VT+DML VRPGEAL VNFPL LHHTPDESVDV NP
Sbjct: 374  KKLAAISEKFNIPVEFHAVPVFAPEVTRDMLDVRPGEALAVNFPLTLHHTPDESVDVTNP 433

Query: 743  RDGLLRTVKSLSPKVVTLVEQESNTNTAPFLPRFVEALEYYSAMFESIDVSLPRDSKERV 922
            RD LLR VKS SPKVVTLVEQESNTNTAPF PRF EAL+YYSAMFESIDV+L RD KER+
Sbjct: 434  RDELLRMVKSFSPKVVTLVEQESNTNTAPFFPRFQEALDYYSAMFESIDVTLERDRKERI 493

Query: 923  NVEQHCLARDIVNVIACEGMERVERHELLGKWKCRLTMAGFKQFPLSSYVNTVIRGLLKS 1102
            NVEQHCLARDIVNVIACEGMERVERHELLGKWK R TMAGF Q+PLSSYVN+VI+ L++ 
Sbjct: 494  NVEQHCLARDIVNVIACEGMERVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRC 553

Query: 1103 YSEHYKLEEIDGAMLLGWKDRNLISGDDWN 1192
            YSEHY L E DGAMLLGWK RNLIS   W+
Sbjct: 554  YSEHYTLVEKDGAMLLGWKKRNLISASAWH 583



 Score = 70.9 bits (172), Expect(2) = e-173
 Identities = 32/47 (68%), Positives = 40/47 (85%)
 Frame = +3

Query: 3   NLKQLLVACAKSLFENRLDDFDKLIGSVRGAVSICGEPIQRLGAYMI 143
           NLK+LL+ACA++L EN LDDF+KLI   R AVSI G+PIQRLGAY++
Sbjct: 212 NLKELLIACARALAENNLDDFEKLIAKARSAVSITGDPIQRLGAYIV 258


>ref|XP_002317558.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222860623|gb|EEE98170.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 577

 Score =  567 bits (1461), Expect(2) = e-173
 Identities = 274/329 (83%), Positives = 294/329 (89%)
 Frame = +2

Query: 203  GAYMIEGLVARKEESGHNIYRALRCREPEGKDLLSYMHILYEICPYLKFGYMAANGAIAE 382
            GAY++EGLVARKE SG NIYRALRC+EPEGKDLLSYMH LYEICPYLKFGYMAANGAIAE
Sbjct: 248  GAYLVEGLVARKESSGTNIYRALRCKEPEGKDLLSYMHTLYEICPYLKFGYMAANGAIAE 307

Query: 383  ACRNEDRIHIIDFQIAQGTQWMTLLQALAARPIGAPHVRITGIDDPVSKYARGDSLEAVG 562
            ACRNED IHI+DF IAQGTQWMTLLQALAARP GAPHVRITGIDDPVSKYARGD L+AV 
Sbjct: 308  ACRNEDHIHIVDFHIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGDGLDAVA 367

Query: 563  KRLQALSEKFNIPVEFHAMPVFAPDVTKDMLMVRPGEALVVNFPLQLHHTPDESVDVNNP 742
            +RL A+SEKFNIP+EFH +PV+APDVTK+M  VRPGEAL VNFPL+LHHTPDESVDVNNP
Sbjct: 368  RRLTAISEKFNIPIEFHGVPVYAPDVTKEMFDVRPGEALAVNFPLELHHTPDESVDVNNP 427

Query: 743  RDGLLRTVKSLSPKVVTLVEQESNTNTAPFLPRFVEALEYYSAMFESIDVSLPRDSKERV 922
            RDGLLR +KSL+PKVVTLVEQESNTNT PFL RFVE L YY AMFESIDV LPR+ KER+
Sbjct: 428  RDGLLRMIKSLNPKVVTLVEQESNTNTTPFLTRFVETLNYYLAMFESIDVRLPRNQKERI 487

Query: 923  NVEQHCLARDIVNVIACEGMERVERHELLGKWKCRLTMAGFKQFPLSSYVNTVIRGLLKS 1102
            +VEQHCLARDIVNVIACEG ER ERHEL GKWK R  MAGF+Q PLSSYVN+VIR LL+ 
Sbjct: 488  SVEQHCLARDIVNVIACEGKEREERHELFGKWKSRFMMAGFRQCPLSSYVNSVIRSLLRC 547

Query: 1103 YSEHYKLEEIDGAMLLGWKDRNLISGDDW 1189
            YSEHY L EIDGAMLLGWKDRNLIS   W
Sbjct: 548  YSEHYTLVEIDGAMLLGWKDRNLISASAW 576



 Score = 69.7 bits (169), Expect(2) = e-173
 Identities = 32/47 (68%), Positives = 40/47 (85%)
 Frame = +3

Query: 3   NLKQLLVACAKSLFENRLDDFDKLIGSVRGAVSICGEPIQRLGAYMI 143
           +LKQLL+ACAK+L EN+++DFDKLI   R  VSI GEPIQRLGAY++
Sbjct: 206 DLKQLLIACAKALAENKVNDFDKLIEKARSVVSISGEPIQRLGAYLV 252


>ref|XP_002282942.1| PREDICTED: chitin-inducible gibberellin-responsive protein 1-like
            [Vitis vinifera]
          Length = 583

 Score =  564 bits (1453), Expect(2) = e-173
 Identities = 273/329 (82%), Positives = 296/329 (89%)
 Frame = +2

Query: 203  GAYMIEGLVARKEESGHNIYRALRCREPEGKDLLSYMHILYEICPYLKFGYMAANGAIAE 382
            GAY++EGLVAR E SG+NIY ALRCREPE KDLLSYM ILYEICPYLKFGYMAANGAIAE
Sbjct: 254  GAYLVEGLVARTEASGNNIYHALRCREPESKDLLSYMQILYEICPYLKFGYMAANGAIAE 313

Query: 383  ACRNEDRIHIIDFQIAQGTQWMTLLQALAARPIGAPHVRITGIDDPVSKYARGDSLEAVG 562
            ACRNEDRIHIIDFQIAQGTQW+TLLQALAARP GAP VRITGIDDPV+KYARG  L+AVG
Sbjct: 314  ACRNEDRIHIIDFQIAQGTQWVTLLQALAARPSGAPRVRITGIDDPVNKYARGAGLDAVG 373

Query: 563  KRLQALSEKFNIPVEFHAMPVFAPDVTKDMLMVRPGEALVVNFPLQLHHTPDESVDVNNP 742
            KRL A+SEKF IPVEFH +PVFAPD+T++ML VRPGEAL VNFPLQLHHTPDESVDVNNP
Sbjct: 374  KRLAAISEKFKIPVEFHPVPVFAPDITQEMLDVRPGEALAVNFPLQLHHTPDESVDVNNP 433

Query: 743  RDGLLRTVKSLSPKVVTLVEQESNTNTAPFLPRFVEALEYYSAMFESIDVSLPRDSKERV 922
            RD LLR VKSLSPKV TLVEQESNTNT PF  RF+E L+YYSAMFESIDV+LPR+ KER+
Sbjct: 434  RDELLRMVKSLSPKVTTLVEQESNTNTTPFFTRFIETLDYYSAMFESIDVALPRERKERI 493

Query: 923  NVEQHCLARDIVNVIACEGMERVERHELLGKWKCRLTMAGFKQFPLSSYVNTVIRGLLKS 1102
            NVEQHCLARDIVN+IACEG ERVERHEL GKWK RLTMAGF+Q+PLS+YVN+VIR LL+ 
Sbjct: 494  NVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLTMAGFRQYPLSTYVNSVIRTLLRC 553

Query: 1103 YSEHYKLEEIDGAMLLGWKDRNLISGDDW 1189
            YSEHY L E DGAMLLGWKDRNL+S   W
Sbjct: 554  YSEHYTLVERDGAMLLGWKDRNLVSASAW 582



 Score = 72.4 bits (176), Expect(2) = e-173
 Identities = 33/47 (70%), Positives = 40/47 (85%)
 Frame = +3

Query: 3   NLKQLLVACAKSLFENRLDDFDKLIGSVRGAVSICGEPIQRLGAYMI 143
           NLK+LL+ CA++L ENRLDDF KL+   RGAVSI GEPIQRLGAY++
Sbjct: 212 NLKELLIECARALSENRLDDFKKLVEKARGAVSISGEPIQRLGAYLV 258


>ref|XP_002319796.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222858172|gb|EEE95719.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 583

 Score =  574 bits (1479), Expect(2) = e-173
 Identities = 278/330 (84%), Positives = 299/330 (90%)
 Frame = +2

Query: 203  GAYMIEGLVARKEESGHNIYRALRCREPEGKDLLSYMHILYEICPYLKFGYMAANGAIAE 382
            GAY+IEGLVARKE SG NIYR L+CREPEGKDLLSYMHILYEICPYLKFGYMAANGAIAE
Sbjct: 254  GAYLIEGLVARKESSGANIYRTLKCREPEGKDLLSYMHILYEICPYLKFGYMAANGAIAE 313

Query: 383  ACRNEDRIHIIDFQIAQGTQWMTLLQALAARPIGAPHVRITGIDDPVSKYARGDSLEAVG 562
            ACRNEDRIHIIDFQIAQGTQWMTLLQALAARP GAPHVRITGIDDPVSKYARGD LEAV 
Sbjct: 314  ACRNEDRIHIIDFQIAQGTQWMTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEAVA 373

Query: 563  KRLQALSEKFNIPVEFHAMPVFAPDVTKDMLMVRPGEALVVNFPLQLHHTPDESVDVNNP 742
            +RL A+SEKFNIPVEFH +PVFAPDVTK+ML VRPGEAL VNFPLQLHHTPDESVDVNNP
Sbjct: 374  RRLSAISEKFNIPVEFHGVPVFAPDVTKEMLDVRPGEALAVNFPLQLHHTPDESVDVNNP 433

Query: 743  RDGLLRTVKSLSPKVVTLVEQESNTNTAPFLPRFVEALEYYSAMFESIDVSLPRDSKERV 922
            RDGLLR +KS +PKVVTLVEQESNTNT PF+ RFVE L YY AMFESIDV+LPRD KER+
Sbjct: 434  RDGLLRMIKSFNPKVVTLVEQESNTNTTPFVTRFVETLNYYLAMFESIDVTLPRDRKERI 493

Query: 923  NVEQHCLARDIVNVIACEGMERVERHELLGKWKCRLTMAGFKQFPLSSYVNTVIRGLLKS 1102
            +VEQHCLARD+VNVIACEG ERVERHEL  KWK R  MAGF+Q+PLS+YVN+VI+ LL++
Sbjct: 494  SVEQHCLARDMVNVIACEGKERVERHELFRKWKSRFMMAGFQQYPLSTYVNSVIKSLLRT 553

Query: 1103 YSEHYKLEEIDGAMLLGWKDRNLISGDDWN 1192
            YSEHY L E DGAMLLGWKDRNLIS   W+
Sbjct: 554  YSEHYTLVENDGAMLLGWKDRNLISASAWH 583



 Score = 62.0 bits (149), Expect(2) = e-173
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = +3

Query: 3   NLKQLLVACAKSLFENRLDDFDKLIGSVRGAVSICGEPIQRLGAYMI 143
           +LKQLL+ACAK+L EN +  FD L    R  VSI GEPIQRLGAY+I
Sbjct: 212 DLKQLLIACAKALAENNVSAFDNLTEKARSVVSISGEPIQRLGAYLI 258


>ref|XP_002334777.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222874652|gb|EEF11783.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 377

 Score =  574 bits (1479), Expect(2) = e-173
 Identities = 278/330 (84%), Positives = 299/330 (90%)
 Frame = +2

Query: 203  GAYMIEGLVARKEESGHNIYRALRCREPEGKDLLSYMHILYEICPYLKFGYMAANGAIAE 382
            GAY+IEGLVARKE SG NIYR L+CREPEGKDLLSYMHILYEICPYLKFGYMAANGAIAE
Sbjct: 48   GAYLIEGLVARKESSGANIYRTLKCREPEGKDLLSYMHILYEICPYLKFGYMAANGAIAE 107

Query: 383  ACRNEDRIHIIDFQIAQGTQWMTLLQALAARPIGAPHVRITGIDDPVSKYARGDSLEAVG 562
            ACRNEDRIHIIDFQIAQGTQWMTLLQALAARP GAPHVRITGIDDPVSKYARGD LEAV 
Sbjct: 108  ACRNEDRIHIIDFQIAQGTQWMTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEAVA 167

Query: 563  KRLQALSEKFNIPVEFHAMPVFAPDVTKDMLMVRPGEALVVNFPLQLHHTPDESVDVNNP 742
            +RL A+SEKFNIPVEFH +PVFAPDVTK+ML VRPGEAL VNFPLQLHHTPDESVDVNNP
Sbjct: 168  RRLSAISEKFNIPVEFHGVPVFAPDVTKEMLDVRPGEALAVNFPLQLHHTPDESVDVNNP 227

Query: 743  RDGLLRTVKSLSPKVVTLVEQESNTNTAPFLPRFVEALEYYSAMFESIDVSLPRDSKERV 922
            RDGLLR +KS +PKVVTLVEQESNTNT PF+ RFVE L YY AMFESIDV+LPRD KER+
Sbjct: 228  RDGLLRMIKSFNPKVVTLVEQESNTNTTPFVTRFVETLNYYLAMFESIDVTLPRDRKERI 287

Query: 923  NVEQHCLARDIVNVIACEGMERVERHELLGKWKCRLTMAGFKQFPLSSYVNTVIRGLLKS 1102
            +VEQHCLARD+VNVIACEG ERVERHEL  KWK R  MAGF+Q+PLS+YVN+VI+ LL++
Sbjct: 288  SVEQHCLARDMVNVIACEGKERVERHELFRKWKSRFMMAGFQQYPLSTYVNSVIKSLLRT 347

Query: 1103 YSEHYKLEEIDGAMLLGWKDRNLISGDDWN 1192
            YSEHY L E DGAMLLGWKDRNLIS   W+
Sbjct: 348  YSEHYTLVENDGAMLLGWKDRNLISASAWH 377



 Score = 62.0 bits (149), Expect(2) = e-173
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = +3

Query: 3   NLKQLLVACAKSLFENRLDDFDKLIGSVRGAVSICGEPIQRLGAYMI 143
           +LKQLL+ACAK+L EN +  FD L    R  VSI GEPIQRLGAY+I
Sbjct: 6   DLKQLLIACAKALAENNVSAFDNLTEKARSVVSISGEPIQRLGAYLI 52


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