BLASTX nr result

ID: Bupleurum21_contig00004621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004621
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633171.1| PREDICTED: 26S proteasome non-ATPase regulat...   278   2e-72
ref|XP_003527170.1| PREDICTED: probable 26S proteasome regulator...   277   3e-72
ref|XP_003527174.1| PREDICTED: probable 26S proteasome regulator...   275   1e-71
ref|XP_003527176.1| PREDICTED: probable 26S proteasome regulator...   275   2e-71
gb|AFK44499.1| unknown [Lotus japonicus]                              273   4e-71

>ref|XP_003633171.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 9-like
           isoform 2 [Vitis vinifera] gi|297743643|emb|CBI36526.3|
           unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  278 bits (711), Expect = 2e-72
 Identities = 147/230 (63%), Positives = 172/230 (74%), Gaps = 7/230 (3%)
 Frame = +3

Query: 93  MVATNLKAETMKLMDRRASLEAEMDAIIHRLTQPGAPGISGNLVNYGGFPRSDIDIPVVR 272
           MV  NLKAE M LMDRR  LEA+M+AII RL QPG PGISG+LV+  GFPRSDIDIP VR
Sbjct: 1   MVGANLKAEAMALMDRRTELEAQMNAIIQRLCQPGGPGISGSLVDSEGFPRSDIDIPTVR 60

Query: 273 ADRLRLAQLRTDYKDVTDKISQNIQVLHSANLTTASPQNKD------TGISGNSQGIFAP 434
           A+R RLA+LR DYKD+T+KI++NIQ+LHSA L   S  +KD      +   G+S     P
Sbjct: 61  AERQRLAELRNDYKDITEKINENIQLLHSARLAPRSSLHKDLDNDEGSNNQGSSTATAVP 120

Query: 435 SIGEGEVSGRSN-SAMDVDIIGGRPFAMVDEISEASPAAEDGLQLGDQIVKFGTVEFGDA 611
           S     V  R   +AMDVD     PFA+VDEI+EASPAAEDGLQLGD+IVKFG VE GD 
Sbjct: 121 SAASHNVLPRDTLTAMDVDATVSLPFAVVDEIAEASPAAEDGLQLGDRIVKFGNVEAGDN 180

Query: 612 LLSKLAAEAQTNRGRAVPIIVKRQGALINLSVTPREWQGRGLLGCHFSIL 761
           LL +LA+EAQTN G A+P+IV RQGALINL++TPR WQGRGLLGCHF +L
Sbjct: 181 LLPRLASEAQTNHGHAIPVIVMRQGALINLTMTPRTWQGRGLLGCHFQML 230


>ref|XP_003527170.1| PREDICTED: probable 26S proteasome regulatory subunit p27-like
           isoform 1 [Glycine max]
          Length = 222

 Score =  277 bits (709), Expect = 3e-72
 Identities = 139/223 (62%), Positives = 180/223 (80%)
 Frame = +3

Query: 93  MVATNLKAETMKLMDRRASLEAEMDAIIHRLTQPGAPGISGNLVNYGGFPRSDIDIPVVR 272
           MVATN+KAETM LMD+R++LEAEM++II RL+QPGAPG+SGNLV+   FP SDID+PVVR
Sbjct: 1   MVATNVKAETMSLMDKRSALEAEMNSIIARLSQPGAPGLSGNLVDSEDFPHSDIDVPVVR 60

Query: 273 ADRLRLAQLRTDYKDVTDKISQNIQVLHSANLTTASPQNKDTGISGNSQGIFAPSIGEGE 452
           A+R RLA+LR+D+ +VTDKI+ NIQ+LHSA L   S +N DT +S N   + A +  +  
Sbjct: 61  AERRRLAELRSDHNEVTDKINLNIQILHSARLGNRSFKNSDTQVSSNMDTV-ASTPSQNV 119

Query: 453 VSGRSNSAMDVDIIGGRPFAMVDEISEASPAAEDGLQLGDQIVKFGTVEFGDALLSKLAA 632
           +  RS ++MDV+++  RPFAMVDEI++ASPA EDGLQLGDQI+KFG VE GD LL +L++
Sbjct: 120 LLIRSPNSMDVNVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDNLLQRLSS 179

Query: 633 EAQTNRGRAVPIIVKRQGALINLSVTPREWQGRGLLGCHFSIL 761
           EAQ+N G AVP+++ RQG +INL++TPR WQ RGLLGCHF IL
Sbjct: 180 EAQSNLGCAVPVVIMRQGTVINLTITPRPWQARGLLGCHFRIL 222


>ref|XP_003527174.1| PREDICTED: probable 26S proteasome regulatory subunit p27-like
           isoform 1 [Glycine max]
          Length = 230

 Score =  275 bits (703), Expect = 1e-71
 Identities = 141/231 (61%), Positives = 182/231 (78%), Gaps = 8/231 (3%)
 Frame = +3

Query: 93  MVATNLKAETMKLMDRRASLEAEMDAIIHRLTQPGAPGISGNLVNYGGFPRSDIDIPVVR 272
           MVATN+KAETM LMD+R++LEAEM++II RL+QPGAPG+SGNLV+  GFPRSDIDIPVVR
Sbjct: 1   MVATNVKAETMSLMDKRSALEAEMNSIIARLSQPGAPGLSGNLVDSEGFPRSDIDIPVVR 60

Query: 273 ADRLRLAQLRTDYKDVTDKISQNIQVLHSANL--------TTASPQNKDTGISGNSQGIF 428
           A+R RLA+LR+D+ +VT+KI+ NIQ+LHSA L         + +    DT IS N   + 
Sbjct: 61  AERRRLAELRSDHNEVTEKINLNIQILHSARLGNRSLPFKNSGNDDGSDTQISSNMDTV- 119

Query: 429 APSIGEGEVSGRSNSAMDVDIIGGRPFAMVDEISEASPAAEDGLQLGDQIVKFGTVEFGD 608
           A +  +  +  RS ++MDV+++  RPFAMVDEI++ASPA EDGLQLGDQI+KFG VE GD
Sbjct: 120 ASTPSQNVLLIRSPNSMDVNVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGD 179

Query: 609 ALLSKLAAEAQTNRGRAVPIIVKRQGALINLSVTPREWQGRGLLGCHFSIL 761
            LL +L++EAQ+N G AVP+++ RQG +INL++TPR WQGRGLLGCHF IL
Sbjct: 180 NLLQRLSSEAQSNLGCAVPVVIMRQGTVINLTITPRPWQGRGLLGCHFRIL 230


>ref|XP_003527176.1| PREDICTED: probable 26S proteasome regulatory subunit p27-like
           isoform 3 [Glycine max]
          Length = 212

 Score =  275 bits (702), Expect = 2e-71
 Identities = 142/223 (63%), Positives = 178/223 (79%)
 Frame = +3

Query: 93  MVATNLKAETMKLMDRRASLEAEMDAIIHRLTQPGAPGISGNLVNYGGFPRSDIDIPVVR 272
           MVATN+KAETM LMD+R++LEAEM++II RL+QPGAPG+SGNLV+  GFPRSDIDIPVVR
Sbjct: 1   MVATNVKAETMSLMDKRSALEAEMNSIIARLSQPGAPGLSGNLVDSEGFPRSDIDIPVVR 60

Query: 273 ADRLRLAQLRTDYKDVTDKISQNIQVLHSANLTTASPQNKDTGISGNSQGIFAPSIGEGE 452
           A+R RLA+LR+D+ +VT+KI+ NIQ+LHSA L   S  N DT  S  SQ +         
Sbjct: 61  AERRRLAELRSDHNEVTEKINLNIQILHSARLGNRS--NMDTVASTPSQNVLLI------ 112

Query: 453 VSGRSNSAMDVDIIGGRPFAMVDEISEASPAAEDGLQLGDQIVKFGTVEFGDALLSKLAA 632
              RS ++MDV+++  RPFAMVDEI++ASPA EDGLQLGDQI+KFG VE GD LL +L++
Sbjct: 113 ---RSPNSMDVNVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDNLLQRLSS 169

Query: 633 EAQTNRGRAVPIIVKRQGALINLSVTPREWQGRGLLGCHFSIL 761
           EAQ+N G AVP+++ RQG +INL++TPR WQGRGLLGCHF IL
Sbjct: 170 EAQSNLGCAVPVVIMRQGTVINLTITPRPWQGRGLLGCHFRIL 212


>gb|AFK44499.1| unknown [Lotus japonicus]
          Length = 228

 Score =  273 bits (699), Expect = 4e-71
 Identities = 138/233 (59%), Positives = 179/233 (76%), Gaps = 10/233 (4%)
 Frame = +3

Query: 93  MVATNLKAETMKLMDRRASLEAEMDAIIHRLTQPGAPGISGNLVNYGGFPRSDIDIPVVR 272
           MVATN+KAETM LMD+R SLEAEM+AII  LTQPGAPG+SGNL++  GFPRSDIDIP VR
Sbjct: 1   MVATNVKAETMSLMDKRTSLEAEMNAIITHLTQPGAPGLSGNLIDSEGFPRSDIDIPAVR 60

Query: 273 ADRLRLAQLRTDYKDVTDKISQNIQVLHSANLTTASPQNKDTGISGNSQG---------- 422
           A+R RL +LR D+K+VT+KI+QNIQ+LHSA L  +  +N     SGN +G          
Sbjct: 61  AERRRLEELRNDHKEVTEKINQNIQILHSARLGKSPFKN-----SGNDEGSDTQTSTAVD 115

Query: 423 IFAPSIGEGEVSGRSNSAMDVDIIGGRPFAMVDEISEASPAAEDGLQLGDQIVKFGTVEF 602
             A + G+  +  ++ ++MDVD++  RPFAMVDEI++ASPA EDGLQLGDQI+KFG VE 
Sbjct: 116 TLASTPGQNVLLRQNPNSMDVDVLVSRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEA 175

Query: 603 GDALLSKLAAEAQTNRGRAVPIIVKRQGALINLSVTPREWQGRGLLGCHFSIL 761
           GD LL +L++E+Q+N  R +P+++ RQG ++NL++TPR WQGRGLLGCHF IL
Sbjct: 176 GDDLLQRLSSESQSNLDRPIPVVITRQGTVVNLTITPRTWQGRGLLGCHFRIL 228


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