BLASTX nr result
ID: Bupleurum21_contig00004620
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00004620
(1630 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524352.1| nucleotide binding protein, putative [Ricinu... 669 0.0
ref|XP_003634345.1| PREDICTED: cirhin-like [Vitis vinifera] 653 0.0
ref|XP_002285395.1| PREDICTED: cirhin-like isoform 1 [Vitis vini... 651 0.0
emb|CAN60281.1| hypothetical protein VITISV_004319 [Vitis vinifera] 651 0.0
ref|XP_002285401.1| PREDICTED: cirhin-like isoform 2 [Vitis vini... 645 0.0
>ref|XP_002524352.1| nucleotide binding protein, putative [Ricinus communis]
gi|223536443|gb|EEF38092.1| nucleotide binding protein,
putative [Ricinus communis]
Length = 1176
Score = 669 bits (1725), Expect = 0.0
Identities = 342/548 (62%), Positives = 411/548 (75%), Gaps = 6/548 (1%)
Frame = +3
Query: 3 RVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRVSSLVWCRGGLDGIKSSGRLFSSS 182
+VAAAREDGSLEIWLVSPG+VGWHCQL+IHGDPNSRVSSLVWCRG GRLFSSS
Sbjct: 29 QVAAAREDGSLEIWLVSPGSVGWHCQLSIHGDPNSRVSSLVWCRGDDTKGLPCGRLFSSS 88
Query: 183 IDGLVSEWDIFGLKAK-IVASIGVSIWQMAITPYKN--SSSHEKKQXXXXXXXXXXXXXX 353
IDG V +WD+F LK K ++ SIGVSIWQMA+ P N S ++ + Q
Sbjct: 89 IDGSVLQWDLFHLKQKTVLESIGVSIWQMAVAPSSNLLSDANNESQHLGNGFLNAKENDS 148
Query: 354 XXXXXXXXXVVTT---IGSATEDTNVAMACDDGCVRIYSFSDSEELIFIKSLPRVSGRTL 524
+ + S ED VA+ACDDGCVRIY+ SDS+E I+ K+LPRVSGR L
Sbjct: 149 DSESESQDDSDSDELHVHSVVEDPRVALACDDGCVRIYTISDSDEFIYNKTLPRVSGRVL 208
Query: 525 SVAWSPDSSKIYSGSSDGLIRCWDPRTASEIYRITVXXXXXXXXXELCIWSLIALRSGTL 704
SV WS D+S+IY+GSSDG IR WD + EIYRIT ELCIWSL+ALR GTL
Sbjct: 209 SVTWSSDASRIYTGSSDGFIRSWDAKLGHEIYRITAGLGGLGSESELCIWSLLALRCGTL 268
Query: 705 VSADSSGSVQFWDSLMGTLLQAHTRHQGDVNAVSADPSHTRVFSAGSDGQVILYKLSKDA 884
VSADS+GSVQFWDS GTLLQAH+ H+GDVNA++A PSH RVFSAGSDGQVILYKLS +
Sbjct: 269 VSADSTGSVQFWDSQHGTLLQAHSSHKGDVNALAAAPSHNRVFSAGSDGQVILYKLSGET 328
Query: 885 SRSTDGKSLVRVMKKWVYVGYSRAHTHDVRALTVAVPISREEIIPDEKVKKKARGSRKPQ 1064
S+D S + MKKWVY+GY RAHTHDVRALTVAVPISRE+ +PDEKV K+ R ++P
Sbjct: 329 VGSSDDVS-AKSMKKWVYIGYVRAHTHDVRALTVAVPISREDSVPDEKV-KRIRSRKRPI 386
Query: 1065 ECSYSKWAHLGVPMIISAGDDTKLFAYSANKFTQFSPHDICPVPQKPPMQLVLNTVFNQT 1244
+ SY KWAHLGVPM+ISAGDDTKLFAYSA +FT+FSPHDICP PQ+ P+QLVLNTVFNQ
Sbjct: 387 DFSYHKWAHLGVPMLISAGDDTKLFAYSAKEFTKFSPHDICPAPQRVPIQLVLNTVFNQN 446
Query: 1245 HLLLIQASKWLDVYCVRTKPSFDSDISSGPSVAIATTELVVKVKSKASQNIICSSMSNSG 1424
LLL+Q S WLD+ C+R K D S GPS A T+L+ ++K+KAS+ IICS++SNSG
Sbjct: 447 SLLLVQGSNWLDILCLRMKSGTMQDASPGPSRDHANTDLLARIKTKASRKIICSTISNSG 506
Query: 1425 VFFSYSDHMKPSLFKLNRSEARKSSWTVEKRKLPPKLPFAHSMCFTCDSSQLMIAGNDRK 1604
+YSDH+KP+LF+L + K+SW+V KR+LP KLPFAHS+ F+ D+++LMIAG+DR+
Sbjct: 507 TLLAYSDHVKPNLFELKKLNG-KASWSVNKRQLPQKLPFAHSLIFSSDNARLMIAGHDRR 565
Query: 1605 IYVVDVES 1628
IYVVDV S
Sbjct: 566 IYVVDVGS 573
>ref|XP_003634345.1| PREDICTED: cirhin-like [Vitis vinifera]
Length = 814
Score = 653 bits (1684), Expect = 0.0
Identities = 344/550 (62%), Positives = 403/550 (73%), Gaps = 8/550 (1%)
Frame = +3
Query: 3 RVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRVSSLVWCRGGLDGIKSSGRLFSSS 182
+VAAAREDGS+EIWLVSPG+VGWHCQLTIHG+PNSRVSSLVWCR G + S GRLFSSS
Sbjct: 28 QVAAAREDGSVEIWLVSPGSVGWHCQLTIHGNPNSRVSSLVWCRSGSKNMPS-GRLFSSS 86
Query: 183 IDGLVSEWDIFGLKAKIVA-SIGVSIWQMAITPYKNS--SSHEKKQXXXXXXXXXXXXXX 353
IDG VSEWD+F LK KIV SIGVSIWQMA PY ++ + HE +
Sbjct: 87 IDGSVSEWDLFDLKQKIVLDSIGVSIWQMAAAPYNDACLTQHELQHVGNGYLNDKLNNAE 146
Query: 354 XXXXXXXXX-----VVTTIGSATEDTNVAMACDDGCVRIYSFSDSEELIFIKSLPRVSGR 518
V S E+ VAM CDDGCVR+YS + S+EL + KSLPRVSGR
Sbjct: 147 DEDKETSESEDDDSVELHEVSVFENPRVAMGCDDGCVRVYSITISDELTYNKSLPRVSGR 206
Query: 519 TLSVAWSPDSSKIYSGSSDGLIRCWDPRTASEIYRITVXXXXXXXXXELCIWSLIALRSG 698
LSV WSP++S IYSGSSDG IRCWD + A EIYRITV ELCIWSL+ALR G
Sbjct: 207 ILSVTWSPNASMIYSGSSDGFIRCWDAKLAHEIYRITVGLGGLGSGPELCIWSLLALRCG 266
Query: 699 TLVSADSSGSVQFWDSLMGTLLQAHTRHQGDVNAVSADPSHTRVFSAGSDGQVILYKLSK 878
TLVS DS+GSVQFWDS GTLLQAH+ H+GDVNA++A PSH RVFSAGSDGQVILYKLS
Sbjct: 267 TLVSGDSNGSVQFWDSQHGTLLQAHSLHKGDVNALAAAPSHNRVFSAGSDGQVILYKLSS 326
Query: 879 DASRSTDGKSLVRVMKKWVYVGYSRAHTHDVRALTVAVPISREEIIPDEKVKKKARGSRK 1058
S+ G +KKW+YV Y RAHTHDVRALTVAVPIS+EE D+K K+ R K
Sbjct: 327 SDDTSSKG------IKKWIYVSYVRAHTHDVRALTVAVPISQEEKTVDKK-DKRIRRKEK 379
Query: 1059 PQECSYSKWAHLGVPMIISAGDDTKLFAYSANKFTQFSPHDICPVPQKPPMQLVLNTVFN 1238
P + SY KWAHLGVPM++SAGDDTKLFAYS +FT+F PHDICP PQ+ MQLVL+T N
Sbjct: 380 PVDFSYHKWAHLGVPMLVSAGDDTKLFAYSVKEFTKFRPHDICPAPQRVAMQLVLDTDVN 439
Query: 1239 QTHLLLIQASKWLDVYCVRTKPSFDSDISSGPSVAIATTELVVKVKSKASQNIICSSMSN 1418
+ LLL+QAS WLD+ C+ TK +D+ S A+ATT+L+V+VKSKAS+ IICS++S
Sbjct: 440 KMPLLLVQASYWLDILCIHTKSGSVTDMGSSSYGALATTDLLVRVKSKASRKIICSTISA 499
Query: 1419 SGVFFSYSDHMKPSLFKLNRSEARKSSWTVEKRKLPPKLPFAHSMCFTCDSSQLMIAGND 1598
SG F+YSDH+KPSLF+L + R S+WTV KR+LP KLPFAHSM F+CDSS+LMIA D
Sbjct: 500 SGSLFAYSDHVKPSLFELKSAHGR-SAWTVNKRQLPQKLPFAHSMVFSCDSSRLMIAAYD 558
Query: 1599 RKIYVVDVES 1628
R+IYVVDV S
Sbjct: 559 RRIYVVDVGS 568
>ref|XP_002285395.1| PREDICTED: cirhin-like isoform 1 [Vitis vinifera]
Length = 828
Score = 651 bits (1680), Expect = 0.0
Identities = 345/563 (61%), Positives = 405/563 (71%), Gaps = 21/563 (3%)
Frame = +3
Query: 3 RVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRVSSLVWCRGGLDGIKSSGRLFSSS 182
+VAAAREDGS+EIWLVSPG+VGWHCQLTIHG+PNSRVSSLVWCR G + S GRLFSSS
Sbjct: 28 QVAAAREDGSVEIWLVSPGSVGWHCQLTIHGNPNSRVSSLVWCRSGSKNMPS-GRLFSSS 86
Query: 183 IDGLVSEWDIFGLKAKIVA-SIGVSIWQMAITPYKNS--SSHEKKQXXXXXXXXXXXXXX 353
IDG VSEWD+F LK KIV SIGVSIWQMA PY ++ + HE +
Sbjct: 87 IDGSVSEWDLFDLKQKIVLDSIGVSIWQMAAAPYNDACLTQHELQHVGNGYLNDKLNNAE 146
Query: 354 XXXXXXXXX-----VVTTIGSATEDTNVAMACDDGCVRIYSFSDSEELIFIKSLPRVSGR 518
V S E+ VAM CDDGCVR+YS + S+EL + KSLPRVSGR
Sbjct: 147 DEDKETSESEDDDSVELHEVSVFENPRVAMGCDDGCVRVYSITISDELTYNKSLPRVSGR 206
Query: 519 TLSVAWSPDSSKIYSGSSDGLIRCWDPRTASEIYRITVXXXXXXXXXELCIWSLIALRSG 698
LSV WSP++S IYSGSSDG IRCWD + A EIYRITV ELCIWSL+ALR G
Sbjct: 207 ILSVTWSPNASMIYSGSSDGFIRCWDAKLAHEIYRITVGLGGLGSGPELCIWSLLALRCG 266
Query: 699 TLVSADSSGSVQFWDSLMGTLLQAHTRHQGDVNAVSADPSHTRVFSAGSDGQVILYKLSK 878
TLVS DS+GSVQFWDS GTLLQAH+ H+GDVNA++A PSH RVFSAGSDGQVILYKLS
Sbjct: 267 TLVSGDSNGSVQFWDSQHGTLLQAHSLHKGDVNALAAAPSHNRVFSAGSDGQVILYKLSS 326
Query: 879 DASRSTDGKSLVRVMKKWVYVGYSRAHTHDVRALTVAVPISREEIIPDEKVK-------- 1034
S+ G +KKW+YV Y RAHTHDVRALTVAVPIS+E+ + DEK K
Sbjct: 327 SDDTSSKG------IKKWIYVSYVRAHTHDVRALTVAVPISQEDQLADEKDKRIHCKEKT 380
Query: 1035 -----KKARGSRKPQECSYSKWAHLGVPMIISAGDDTKLFAYSANKFTQFSPHDICPVPQ 1199
K+ R KP + SY KWAHLGVPM++SAGDDTKLFAYS +FT+F PHDICP PQ
Sbjct: 381 VDKKDKRIRRKEKPVDFSYHKWAHLGVPMLVSAGDDTKLFAYSVKEFTKFRPHDICPAPQ 440
Query: 1200 KPPMQLVLNTVFNQTHLLLIQASKWLDVYCVRTKPSFDSDISSGPSVAIATTELVVKVKS 1379
+ MQLVL+T N+ LLL+QAS WLD+ C+ TK +D+ S A+ATT+L+V+VKS
Sbjct: 441 RVAMQLVLDTDVNKMPLLLVQASYWLDILCIHTKSGSVTDMGSSSYGALATTDLLVRVKS 500
Query: 1380 KASQNIICSSMSNSGVFFSYSDHMKPSLFKLNRSEARKSSWTVEKRKLPPKLPFAHSMCF 1559
KAS+ IICS++S SG F+YSDH+KPSLF+L + R S+WTV KR+LP KLPFAHSM F
Sbjct: 501 KASRKIICSTISASGSLFAYSDHVKPSLFELKSAHGR-SAWTVNKRQLPQKLPFAHSMVF 559
Query: 1560 TCDSSQLMIAGNDRKIYVVDVES 1628
+CDSS+LMIA DR+IYVVDV S
Sbjct: 560 SCDSSRLMIAAYDRRIYVVDVGS 582
>emb|CAN60281.1| hypothetical protein VITISV_004319 [Vitis vinifera]
Length = 792
Score = 651 bits (1680), Expect = 0.0
Identities = 345/563 (61%), Positives = 405/563 (71%), Gaps = 21/563 (3%)
Frame = +3
Query: 3 RVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRVSSLVWCRGGLDGIKSSGRLFSSS 182
+VAAAREDGS+EIWLVSPG+VGWHCQLTIHG+PNSRVSSLVWCR G + S GRLFSSS
Sbjct: 28 QVAAAREDGSVEIWLVSPGSVGWHCQLTIHGNPNSRVSSLVWCRSGSKNMPS-GRLFSSS 86
Query: 183 IDGLVSEWDIFGLKAKIVA-SIGVSIWQMAITPYKNS--SSHEKKQXXXXXXXXXXXXXX 353
IDG VSEWD+F LK KIV SIGVSIWQMA PY ++ + HE +
Sbjct: 87 IDGSVSEWDLFDLKQKIVLDSIGVSIWQMAAAPYNDACLTQHELQHVGNGYLNDKLNNAE 146
Query: 354 XXXXXXXXX-----VVTTIGSATEDTNVAMACDDGCVRIYSFSDSEELIFIKSLPRVSGR 518
V S E+ VAM CDDGCVR+YS + S+EL + KSLPRVSGR
Sbjct: 147 DEDKETSESEDDDSVELHEVSVFENPRVAMGCDDGCVRVYSITISDELTYNKSLPRVSGR 206
Query: 519 TLSVAWSPDSSKIYSGSSDGLIRCWDPRTASEIYRITVXXXXXXXXXELCIWSLIALRSG 698
LSV WSP++S IYSGSSDG IRCWD + A EIYRITV ELCIWSL+ALR G
Sbjct: 207 ILSVTWSPNASMIYSGSSDGFIRCWDAKLAHEIYRITVGLGGLGSGPELCIWSLLALRCG 266
Query: 699 TLVSADSSGSVQFWDSLMGTLLQAHTRHQGDVNAVSADPSHTRVFSAGSDGQVILYKLSK 878
TLVS DS+GSVQFWDS GTLLQAH+ H+GDVNA++A PSH RVFSAGSDGQVILYKLS
Sbjct: 267 TLVSGDSNGSVQFWDSQHGTLLQAHSLHKGDVNALAAAPSHNRVFSAGSDGQVILYKLSS 326
Query: 879 DASRSTDGKSLVRVMKKWVYVGYSRAHTHDVRALTVAVPISREEIIPDEKVK-------- 1034
S+ G +KKW+YV Y RAHTHDVRALTVAVPIS+E+ + DEK K
Sbjct: 327 SDDTSSKG------IKKWIYVSYVRAHTHDVRALTVAVPISQEDQLADEKDKRIHCKEKT 380
Query: 1035 -----KKARGSRKPQECSYSKWAHLGVPMIISAGDDTKLFAYSANKFTQFSPHDICPVPQ 1199
K+ R KP + SY KWAHLGVPM++SAGDDTKLFAYS +FT+F PHDICP PQ
Sbjct: 381 VDKKDKRIRRKEKPVDFSYHKWAHLGVPMLVSAGDDTKLFAYSVKEFTKFRPHDICPAPQ 440
Query: 1200 KPPMQLVLNTVFNQTHLLLIQASKWLDVYCVRTKPSFDSDISSGPSVAIATTELVVKVKS 1379
+ MQLVL+T N+ LLL+QAS WLD+ C+ TK +D+ S A+ATT+L+V+VKS
Sbjct: 441 RVAMQLVLDTDVNKMPLLLVQASYWLDILCIHTKSGSVTDMGSSSYGALATTDLLVRVKS 500
Query: 1380 KASQNIICSSMSNSGVFFSYSDHMKPSLFKLNRSEARKSSWTVEKRKLPPKLPFAHSMCF 1559
KAS+ IICS++S SG F+YSDH+KPSLF+L + R S+WTV KR+LP KLPFAHSM F
Sbjct: 501 KASRKIICSTISASGSLFAYSDHVKPSLFELKSAHGR-SAWTVNKRQLPQKLPFAHSMVF 559
Query: 1560 TCDSSQLMIAGNDRKIYVVDVES 1628
+CDSS+LMIA DR+IYVVDV S
Sbjct: 560 SCDSSRLMIAAYDRRIYVVDVGS 582
>ref|XP_002285401.1| PREDICTED: cirhin-like isoform 2 [Vitis vinifera]
Length = 821
Score = 645 bits (1665), Expect = 0.0
Identities = 342/556 (61%), Positives = 401/556 (72%), Gaps = 14/556 (2%)
Frame = +3
Query: 3 RVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRVSSLVWCRGGLDGIKSSGRLFSSS 182
+VAAAREDGS+EIWLVSPG+VGWHCQLTIHG+PNSRVSSLVWCR G + S GRLFSSS
Sbjct: 28 QVAAAREDGSVEIWLVSPGSVGWHCQLTIHGNPNSRVSSLVWCRSGSKNMPS-GRLFSSS 86
Query: 183 IDGLVSEWDIFGLKAKIVA-SIGVSIWQMAITPYKNS--SSHEKKQXXXXXXXXXXXXXX 353
IDG VSEWD+F LK KIV SIGVSIWQMA PY ++ + HE +
Sbjct: 87 IDGSVSEWDLFDLKQKIVLDSIGVSIWQMAAAPYNDACLTQHELQHVGNGYLNDKLNNAE 146
Query: 354 XXXXXXXXX-----VVTTIGSATEDTNVAMACDDGCVRIYSFSDSEELIFIKSLPRVSGR 518
V S E+ VAM CDDGCVR+YS + S+EL + KSLPRVSGR
Sbjct: 147 DEDKETSESEDDDSVELHEVSVFENPRVAMGCDDGCVRVYSITISDELTYNKSLPRVSGR 206
Query: 519 TLSVAWSPDSSKIYSGSSDGLIRCWDPRTASEIYRITVXXXXXXXXXELCIWSLIALRSG 698
LSV WSP++S IYSGSSDG IRCWD + A EIYRITV ELCIWSL+ALR G
Sbjct: 207 ILSVTWSPNASMIYSGSSDGFIRCWDAKLAHEIYRITVGLGGLGSGPELCIWSLLALRCG 266
Query: 699 TLVSADSSGSVQFWDSLMGTLLQAHTRHQGDVNAVSADPSHTRVFSAGSDGQVILYKLSK 878
TLVS DS+GSVQFWDS GTLLQAH+ H+GDVNA++A PSH RVFSAGSDGQVILYKLS
Sbjct: 267 TLVSGDSNGSVQFWDSQHGTLLQAHSLHKGDVNALAAAPSHNRVFSAGSDGQVILYKLSS 326
Query: 879 DASRSTDGKSLVRVMKKWVYVGYSRAHTHDVRALTVAVPISREEIIPD------EKVKKK 1040
S+ G +KKW+YV Y RAHTHDVRALTVAVPIS+E D + K+
Sbjct: 327 SDDTSSKG------IKKWIYVSYVRAHTHDVRALTVAVPISQEGFFHDLCSFSLLILDKR 380
Query: 1041 ARGSRKPQECSYSKWAHLGVPMIISAGDDTKLFAYSANKFTQFSPHDICPVPQKPPMQLV 1220
R KP + SY KWAHLGVPM++SAGDDTKLFAYS +FT+F PHDICP PQ+ MQLV
Sbjct: 381 IRRKEKPVDFSYHKWAHLGVPMLVSAGDDTKLFAYSVKEFTKFRPHDICPAPQRVAMQLV 440
Query: 1221 LNTVFNQTHLLLIQASKWLDVYCVRTKPSFDSDISSGPSVAIATTELVVKVKSKASQNII 1400
L+T N+ LLL+QAS WLD+ C+ TK +D+ S A+ATT+L+V+VKSKAS+ II
Sbjct: 441 LDTDVNKMPLLLVQASYWLDILCIHTKSGSVTDMGSSSYGALATTDLLVRVKSKASRKII 500
Query: 1401 CSSMSNSGVFFSYSDHMKPSLFKLNRSEARKSSWTVEKRKLPPKLPFAHSMCFTCDSSQL 1580
CS++S SG F+YSDH+KPSLF+L + R S+WTV KR+LP KLPFAHSM F+CDSS+L
Sbjct: 501 CSTISASGSLFAYSDHVKPSLFELKSAHGR-SAWTVNKRQLPQKLPFAHSMVFSCDSSRL 559
Query: 1581 MIAGNDRKIYVVDVES 1628
MIA DR+IYVVDV S
Sbjct: 560 MIAAYDRRIYVVDVGS 575