BLASTX nr result
ID: Bupleurum21_contig00004614
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00004614
(1486 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16805.3| unnamed protein product [Vitis vinifera] 236 2e-59
gb|AAD31056.1|AC007357_5 F3F19.5 [Arabidopsis thaliana] 204 4e-50
ref|NP_172762.2| coilin [Arabidopsis thaliana] gi|20260258|gb|AA... 204 4e-50
ref|XP_002892725.1| hypothetical protein ARALYDRAFT_471456 [Arab... 201 3e-49
ref|XP_002530050.1| conserved hypothetical protein [Ricinus comm... 191 4e-46
>emb|CBI16805.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 236 bits (601), Expect = 2e-59
Identities = 175/499 (35%), Positives = 257/499 (51%), Gaps = 25/499 (5%)
Frame = -1
Query: 1486 VKKKGSKLSNIVEVANNDGSAEELGNEENKTLPHGVQLLANEEFDKESGGYQXXXXXXXX 1307
VK+KG + +++EV + +E+ EN+ + GV+LLANEEFDKE+GGY+
Sbjct: 88 VKRKGGAVIDLLEVGDETNCSEDEAIVENQHIHRGVKLLANEEFDKETGGYESESEEDEP 147
Query: 1306 E-----IAIENTPGGNALSKKRKASERLAGSKKKKHK-------SAVPDGAKRNCLTNVI 1163
+ + +E GNA SKKRKAS +L K+KK+K V + +
Sbjct: 148 DQPEETVQVETASAGNAGSKKRKASRKLKSPKRKKNKYTRLEKCPVVLEDVENGVCEEQT 207
Query: 1162 KSRNCDGVVVS------KSHRRKEILSNAXXXXXXXXXXXXXXXXXXXXXXXSVQSDQHK 1001
KS CD K H+ + N + + + +
Sbjct: 208 KS--CDDCTALPKKGSLKKHKSSNV--NGKPDKARTLNIDERSNDVDESSPNAKRCGELQ 263
Query: 1000 ENDKVIEDTSCAP--TKKLPXXXXXXXXXXRQWLRAMAKIGKEEVCDSKRPKQQQRPAKA 827
EN + + P T+K P R+WLR +AK+ K+E+ Q+Q P
Sbjct: 264 ENGSQGVEVANPPDGTQKYPSRSARRKKAKRKWLRELAKVEKKEM------HQRQSP--- 314
Query: 826 EKKEVICQSKGLLHWRQSREGCNHYKKEDIAPMTLRPGHIRFETLDEDEIVQKSQVTMET 647
+KEV Q L H Q + + I P+ +RPGHIRFE L +D+ +Q++ V++ET
Sbjct: 315 -EKEV--QKNSLEH--QQPDQNSDTDDAVIVPIVIRPGHIRFEPLGKDQTIQQNPVSVET 369
Query: 646 FQGNANTIEE--QKWGTEKISSTQRKDDANINKNQSVTPNNGKDTVISAPIEFDKLPPLP 473
FQ N T ++ QKWG EK+S +R D + N+ S T + T P++FDKLP L
Sbjct: 370 FQWNGTTSKKKGQKWGKEKMSC-RRNDYKDFNQQHSETFAVEEGTPPKDPMDFDKLPSLT 428
Query: 472 GNLPQEGYLIAYRLLELSSSWTPEPSEFRVGRVLWYKPESRTIMLVPVPEYPINLE-KLD 296
+ P+EG +IAYRL+ELSS+WTPE S FRVG++ Y PES ++L+ VPE PI E ++D
Sbjct: 429 SS-PKEGDMIAYRLIELSSTWTPELSTFRVGKISSYDPESNKLILISVPESPIVAETRID 487
Query: 295 GDESASQ--PDNSLYDEDGSLEIDFPSLLDVRIVKRSDANTGQDAMVNVNEVSIMNEDAT 122
D SA + PD SLY EDGSLEIDF SL+DVRI+K +++ + V E + +DA
Sbjct: 488 EDASALEPDPDTSLYREDGSLEIDFSSLIDVRIIKSGNSHLEKAVTARV-EAPVDTQDAV 546
Query: 121 PNLLNFSDKEKQTTNKENG 65
+ + +T+ G
Sbjct: 547 SGVKPNNKNSGMSTSLPGG 565
>gb|AAD31056.1|AC007357_5 F3F19.5 [Arabidopsis thaliana]
Length = 547
Score = 204 bits (520), Expect = 4e-50
Identities = 159/487 (32%), Positives = 248/487 (50%), Gaps = 13/487 (2%)
Frame = -1
Query: 1486 VKKKGSKLSNIVEVANNDGSAEELGNEENKTLPHGVQLLANEEFDKESGGYQXXXXXXXX 1307
VKKK L IV +++ + EE + G LLANEEF KE+GGY+
Sbjct: 28 VKKKKESLLEIVGEDSDENVYNAIEVEERPQIRPGEMLLANEEFQKETGGYESESEEDEL 87
Query: 1306 EIAIENTPGGNALSKKRKASERLAGSKKKKHK----SAVPDGAKRNCL-TNVIKSRNCDG 1142
E E SKKRK S + +K+KK K PD + + +NV+K +
Sbjct: 88 EEEAEEFVPEKKASKKRKTSSKNQSTKRKKCKLDTTEESPDERENTAVVSNVVKKKKKKK 147
Query: 1141 VVVSKSHRRKEILSNAXXXXXXXXXXXXXXXXXXXXXXXSVQSDQHKENDKVIEDTSCAP 962
+ +S E +++ Q ++ KE++ + + + A
Sbjct: 148 SLDVQSANNDEQNNDSTKPMTKSKRSS--------------QQEESKEHNDLCQLS--AE 191
Query: 961 TKKLPXXXXXXXXXXRQWLRAMAKIGKEEVCDSKRP-KQQQRPA----KAEKKEVICQSK 797
TKK P RQWLR K+ KEE+ ++ Q+P KE C++
Sbjct: 192 TKKTPSRSARRKKAKRQWLREKTKLEKEELLQTQLVVAPSQKPVITIDHQATKEKHCET- 250
Query: 796 GLLHWRQSREGCNHYKKEDIAPMTLRPGHIRFETL---DEDEIVQKSQVTMETFQGNANT 626
L +Q+ E + + E + P+ +RPGHIRF+ L DE + + V + GN
Sbjct: 251 --LENQQAEEVSDGFGDE-VVPVEVRPGHIRFKPLAGTDEASLDSEPLVENVLWNGNMTK 307
Query: 625 IEEQKWGTEKISSTQRKDDANINKNQSVTPNNGKDTVISAPIEFDKLPPLPGNLPQEGYL 446
+ QKWGTEK S ++ + N++ + P +T+ + PI++++L G++ ++G +
Sbjct: 308 KKGQKWGTEK-SGFSKRYAQDFNEDATTQPAEA-ETLANCPIDYEQLVAYTGSV-KKGDV 364
Query: 445 IAYRLLELSSSWTPEPSEFRVGRVLWYKPESRTIMLVPVPEYPINLEKLDGDESASQPDN 266
IAYRL+EL+SSWTPE S FRVG++ +Y P+S+ + L+PV E+PI + + D+ QPD
Sbjct: 365 IAYRLIELTSSWTPEVSSFRVGKISYYDPDSKMVTLMPVQEFPIEKKTEEDDDFCMQPDT 424
Query: 265 SLYDEDGSLEIDFPSLLDVRIVKRSDANTGQDAMVNVNEVSIMNEDATPNLLNFSDKEKQ 86
SLY EDGSLEI+F +LLDVR VK S +++ + A + E ++ A L+ ++KE Q
Sbjct: 425 SLYKEDGSLEIEFSALLDVRSVKTSSSDSAEVAKSALPE---PDQSAKKPKLS-ANKELQ 480
Query: 85 TTNKENG 65
T KENG
Sbjct: 481 TPAKENG 487
>ref|NP_172762.2| coilin [Arabidopsis thaliana] gi|20260258|gb|AAM13027.1| unknown
protein [Arabidopsis thaliana] gi|22136510|gb|AAM91333.1|
unknown protein [Arabidopsis thaliana]
gi|332190840|gb|AEE28961.1| coilin [Arabidopsis thaliana]
Length = 608
Score = 204 bits (520), Expect = 4e-50
Identities = 159/487 (32%), Positives = 248/487 (50%), Gaps = 13/487 (2%)
Frame = -1
Query: 1486 VKKKGSKLSNIVEVANNDGSAEELGNEENKTLPHGVQLLANEEFDKESGGYQXXXXXXXX 1307
VKKK L IV +++ + EE + G LLANEEF KE+GGY+
Sbjct: 89 VKKKKESLLEIVGEDSDENVYNAIEVEERPQIRPGEMLLANEEFQKETGGYESESEEDEL 148
Query: 1306 EIAIENTPGGNALSKKRKASERLAGSKKKKHK----SAVPDGAKRNCL-TNVIKSRNCDG 1142
E E SKKRK S + +K+KK K PD + + +NV+K +
Sbjct: 149 EEEAEEFVPEKKASKKRKTSSKNQSTKRKKCKLDTTEESPDERENTAVVSNVVKKKKKKK 208
Query: 1141 VVVSKSHRRKEILSNAXXXXXXXXXXXXXXXXXXXXXXXSVQSDQHKENDKVIEDTSCAP 962
+ +S E +++ Q ++ KE++ + + + A
Sbjct: 209 SLDVQSANNDEQNNDSTKPMTKSKRSS--------------QQEESKEHNDLCQLS--AE 252
Query: 961 TKKLPXXXXXXXXXXRQWLRAMAKIGKEEVCDSKRP-KQQQRPA----KAEKKEVICQSK 797
TKK P RQWLR K+ KEE+ ++ Q+P KE C++
Sbjct: 253 TKKTPSRSARRKKAKRQWLREKTKLEKEELLQTQLVVAPSQKPVITIDHQATKEKHCET- 311
Query: 796 GLLHWRQSREGCNHYKKEDIAPMTLRPGHIRFETL---DEDEIVQKSQVTMETFQGNANT 626
L +Q+ E + + E + P+ +RPGHIRF+ L DE + + V + GN
Sbjct: 312 --LENQQAEEVSDGFGDE-VVPVEVRPGHIRFKPLAGTDEASLDSEPLVENVLWNGNMTK 368
Query: 625 IEEQKWGTEKISSTQRKDDANINKNQSVTPNNGKDTVISAPIEFDKLPPLPGNLPQEGYL 446
+ QKWGTEK S ++ + N++ + P +T+ + PI++++L G++ ++G +
Sbjct: 369 KKGQKWGTEK-SGFSKRYAQDFNEDATTQPAEA-ETLANCPIDYEQLVAYTGSV-KKGDV 425
Query: 445 IAYRLLELSSSWTPEPSEFRVGRVLWYKPESRTIMLVPVPEYPINLEKLDGDESASQPDN 266
IAYRL+EL+SSWTPE S FRVG++ +Y P+S+ + L+PV E+PI + + D+ QPD
Sbjct: 426 IAYRLIELTSSWTPEVSSFRVGKISYYDPDSKMVTLMPVQEFPIEKKTEEDDDFCMQPDT 485
Query: 265 SLYDEDGSLEIDFPSLLDVRIVKRSDANTGQDAMVNVNEVSIMNEDATPNLLNFSDKEKQ 86
SLY EDGSLEI+F +LLDVR VK S +++ + A + E ++ A L+ ++KE Q
Sbjct: 486 SLYKEDGSLEIEFSALLDVRSVKTSSSDSAEVAKSALPE---PDQSAKKPKLS-ANKELQ 541
Query: 85 TTNKENG 65
T KENG
Sbjct: 542 TPAKENG 548
>ref|XP_002892725.1| hypothetical protein ARALYDRAFT_471456 [Arabidopsis lyrata subsp.
lyrata] gi|297338567|gb|EFH68984.1| hypothetical protein
ARALYDRAFT_471456 [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 201 bits (512), Expect = 3e-49
Identities = 155/485 (31%), Positives = 238/485 (49%), Gaps = 11/485 (2%)
Frame = -1
Query: 1486 VKKKGSKLSNIVEVANNDGSAEELGNEENKTLPHGVQLLANEEFDKESGGYQXXXXXXXX 1307
VKKK L IV + + + EE G LLANEEF E+GGY+
Sbjct: 89 VKKKKESLLEIVGEDSEENVYNAIEVEERPQFRPGEMLLANEEFQNETGGYESESEEDEV 148
Query: 1306 EIAIENTPGGNALSKKRKASERLAGSKKKKHKSAVPDGAKRNCLTNVIKSRNCDGVVVSK 1127
E E SKKRKAS + SK+KK K A + + + + + V +
Sbjct: 149 EEEAEEFVPEKKTSKKRKASSKSLSSKRKKCKLATTEESPEERENTAVVKKKKKSLDVQR 208
Query: 1126 SHRRKEILSNAXXXXXXXXXXXXXXXXXXXXXXXSVQSDQHKENDKVIEDTSCAPTKKLP 947
+ ++ N Q ++ KE + + + ++ TKK P
Sbjct: 209 AENDEQDNGNTKPITKSKRSS---------------QQEESKEPNDLCQQST--ETKKTP 251
Query: 946 XXXXXXXXXXRQWLRAMAKIGKEEVCDSKRPKQQQRPAKAEKKEVIC---QSKGLLHWR- 779
RQWLR K+ KEE+ +Q+Q +K VI Q+ H
Sbjct: 252 SRSARRKKAKRQWLREKTKLEKEEL------QQKQLVVAPSQKPVITIDYQATEENHCEA 305
Query: 778 ---QSREGCNHYKKEDIAPMTLRPGHIRFETLD-EDEIVQKSQVTMETFQGNANTIEE-- 617
Q + + +++ P+ +RPGHIRF+ L DE +S+ +E F N N ++
Sbjct: 306 LENQQPDDLSDGVGDEVVPVEVRPGHIRFKPLTGTDEAPLESEPLVEKFLWNGNMTKKKG 365
Query: 616 QKWGTEKISSTQR-KDDANINKNQSVTPNNGKDTVISAPIEFDKLPPLPGNLPQEGYLIA 440
QKWGTEK ++R D N + P +T PI++++L G++ ++G +IA
Sbjct: 366 QKWGTEKSGFSKRYAQDFNEDTTYQTQPTEA-ETPAKGPIDYEQLVAYTGSV-KKGDVIA 423
Query: 439 YRLLELSSSWTPEPSEFRVGRVLWYKPESRTIMLVPVPEYPINLEKLDGDESASQPDNSL 260
YRL+EL+SSWTPE S FRVG++ +Y P+S+ + L+PV E+PI + + D+ + +PD +L
Sbjct: 424 YRLIELTSSWTPEVSSFRVGKISYYDPDSKKVTLMPVQEFPIEKKTEEDDDFSMEPDTAL 483
Query: 259 YDEDGSLEIDFPSLLDVRIVKRSDANTGQDAMVNVNEVSIMNEDATPNLLNFSDKEKQTT 80
Y EDGSLEI+F +LLDVR VK S +++ + A E ++ AT L+ ++K+ QT
Sbjct: 484 YKEDGSLEIEFSALLDVRSVKTSSSDSAEVAKSAPPE---PDQSATKLKLS-ANKDLQTP 539
Query: 79 NKENG 65
KENG
Sbjct: 540 IKENG 544
>ref|XP_002530050.1| conserved hypothetical protein [Ricinus communis]
gi|223530466|gb|EEF32350.1| conserved hypothetical
protein [Ricinus communis]
Length = 607
Score = 191 bits (485), Expect = 4e-46
Identities = 155/499 (31%), Positives = 235/499 (47%), Gaps = 25/499 (5%)
Frame = -1
Query: 1486 VKKKGSKLSNIVEVANNDGSAEELGN--EENKTLPHGVQLLANEEFDKESGGYQXXXXXX 1313
V+K G S IV V ++ +A E+ E + G+ LLANEEF+KESGGYQ
Sbjct: 84 VEKNGGVSSEIVMVGDDVNNALEVVEIVETQPLVTTGMNLLANEEFEKESGGYQSDEEED 143
Query: 1312 XXEI------AIENTPGGNALSKKRKASERLAGSKKKKHKSAVPDGAKR------NCLTN 1169
+ +EN +SKKRKA + L K+KK KSA + N +T
Sbjct: 144 VPKQEEEAVHVVENASEVKTISKKRKAMKDLKSPKRKKTKSARAEKHAAVLEDMGNNVTG 203
Query: 1168 VIKSRNCDGVVVSKSHRRKEILSNAXXXXXXXXXXXXXXXXXXXXXXXSVQSDQHKENDK 989
+C +S K LS A + Q +
Sbjct: 204 EQNGTSCTPKFDERSESSKA-LSKAKR----------------------ISQPQENGDAS 240
Query: 988 VIEDTSCAPTKKLPXXXXXXXXXXRQWLRAMAKIGKEEVCDSKRPKQQQRPAKAEKK--- 818
V S + TKKLP R+WLR + + K+Q AEK
Sbjct: 241 VDASPSTSGTKKLPSRSARRKQAKRRWLREKLRAER---------KEQSSQTLAEKGNNG 291
Query: 817 --EVICQSKGLLHWRQSREGCNHYKKED-IAPMTLRPGHIRFETLDE---DEIVQKSQVT 656
E + +S G ++ ED I P+ +RPGHIRFE L + ++ Q++ +
Sbjct: 292 VFEELPESGGEEPQEDDQQPDKDSDLEDDIVPIVIRPGHIRFEPLSKAGANQAEQQTHIP 351
Query: 655 METFQGNANTIEE--QKWGTEKISSTQRKDDANINKNQSVTPNNGKDTVISAPIEFDKLP 482
+E F N T ++ QKWG EK +S +R D N+++ S +G V ++F+KL
Sbjct: 352 VEIFHWNGITSKKKGQKWGKEKATSYKRNDHRNVSQECSEVRKDGGRPVYDR-VDFEKLE 410
Query: 481 PLPGNLPQEGYLIAYRLLELSSSWTPEPSEFRVGRVLWYKPESRTIMLVPVPEYPINLEK 302
LP+EG +IAYRL+ELS SWTPE S +RVG++ Y +S + LVPVP YP+ ++
Sbjct: 411 -FYTTLPKEGDVIAYRLIELSPSWTPEISSYRVGKISRYDMQSNRVRLVPVPGYPVTHKE 469
Query: 301 LDGDESASQPDNSLYDEDGSLEIDFPSLLDVRIVKRSDANTGQDAMVNVNEVSIMNEDAT 122
D SA+ + Y +DGSL I+F SL++VR+V R ++N+ + +++V + ++D
Sbjct: 470 TGDDASAAPSETIPYAKDGSLWIEFASLIEVRLVTRGNSNSVKSVAGEIDKVPVRDQDNR 529
Query: 121 PNLLNFSDKEKQTTNKENG 65
+ + E + +ENG
Sbjct: 530 TGCRSNNGNESHVSAQENG 548