BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004605
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog ...   322   9e-86
emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]   314   2e-83
ref|XP_004156938.1| PREDICTED: 30S ribosomal protein S1-like [Cu...   295   1e-77
ref|XP_004152109.1| PREDICTED: 30S ribosomal protein S1-like [Cu...   295   1e-77
ref|XP_003553029.1| PREDICTED: 40S ribosomal protein S1-like [Gl...   292   9e-77

>ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog [Vitis vinifera]
           gi|296089601|emb|CBI39420.3| unnamed protein product
           [Vitis vinifera]
          Length = 390

 Score =  322 bits (825), Expect = 9e-86
 Identities = 153/196 (78%), Positives = 179/196 (91%)
 Frame = +3

Query: 42  RGSADWEAAKTYIEKGLVYQGRVENFNGGGLLVRFQSLLGFLPFPQLSPSHSCKEPNKSI 221
           R SADW+AA+ ++E G +Y+GR+E FNGGGLLVRF SL+GFLPFPQLSPSHSCKEP+K+I
Sbjct: 90  RRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKEPHKTI 149

Query: 222 QEIARALTGSLISVKVIQADETTKKLILSEKEAIWVKYSPKISVGDIFDARVGSIEDYGA 401
           QEIA+ L GSLISVKVI ADE  +KLI SEKEA W+K+S +I++GDIF+A VGS+EDYGA
Sbjct: 150 QEIAKGLIGSLISVKVILADEEKRKLIFSEKEAAWLKFSKQINIGDIFEAMVGSVEDYGA 209

Query: 402 FLHLRFPDGCYHLTGLVHVSEVSWDLVQDVRDILHEGDAVRVKIIKIDRLKSRITLSIKQ 581
           F+HLRFPDG YHLTGLVHVSEVSWDLVQDVRD+L+EGD VRVKI+K+DR+KSRITLSIKQ
Sbjct: 210 FVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDVLNEGDEVRVKIVKVDRVKSRITLSIKQ 269

Query: 582 LEEDPLLETLDKVIPK 629
           LEEDPLLETLDKVIP+
Sbjct: 270 LEEDPLLETLDKVIPQ 285



 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 46/53 (86%), Positives = 52/53 (98%)
 Frame = +2

Query: 812 VVSQDLQLWLSNSPSIGEQFTLLARAGRQVQEIQMTTTLDQEGIKKALQRVLE 970
           VVSQDLQLWLSN+P++ +QFTLLARAGRQVQEIQ+TT+LDQEGIKKALQRVLE
Sbjct: 335 VVSQDLQLWLSNAPAVDKQFTLLARAGRQVQEIQLTTSLDQEGIKKALQRVLE 387


>emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]
          Length = 418

 Score =  314 bits (804), Expect = 2e-83
 Identities = 153/206 (74%), Positives = 179/206 (86%), Gaps = 10/206 (4%)
 Frame = +3

Query: 42  RGSADWEAAKTYIEKGLVYQGRVENFNGGGLLVRFQSLLGFLPFPQLSPSHSCKEPNKSI 221
           R SADW+AA+ ++E G +Y+GR+E FNGGGLLVRF SL+GFLPFPQLSPSHSCKEP+K+I
Sbjct: 90  RRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKEPHKTI 149

Query: 222 QEIARALTGSLISVKVIQADETTKKLILSEKEAIWVKYSPKISVGDIFDARVGSIEDYGA 401
           QEIA+ L GSLISVKVI ADE  +KLI SEKEA W+K+S +I++GDIF+A VGS+EDYGA
Sbjct: 150 QEIAKGLIGSLISVKVILADEEKRKLIFSEKEAAWLKFSKQINIGDIFEAMVGSVEDYGA 209

Query: 402 FLHLRFPD----------GCYHLTGLVHVSEVSWDLVQDVRDILHEGDAVRVKIIKIDRL 551
           F+HLRFPD          G YHLTGLVHVSEVSWDLVQDVRD+L+EGD VRVKI+K+DR+
Sbjct: 210 FVHLRFPDGTSFSVTYITGLYHLTGLVHVSEVSWDLVQDVRDVLNEGDEVRVKIVKVDRV 269

Query: 552 KSRITLSIKQLEEDPLLETLDKVIPK 629
           KSRITLSIKQLEEDPLLETLDKVIP+
Sbjct: 270 KSRITLSIKQLEEDPLLETLDKVIPQ 295



 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 46/53 (86%), Positives = 52/53 (98%)
 Frame = +2

Query: 812 VVSQDLQLWLSNSPSIGEQFTLLARAGRQVQEIQMTTTLDQEGIKKALQRVLE 970
           VVSQDLQLWLSN+P++ +QFTLLARAGRQVQEIQ+TT+LDQEGIKKALQRVLE
Sbjct: 363 VVSQDLQLWLSNAPAVDKQFTLLARAGRQVQEIQLTTSLDQEGIKKALQRVLE 415


>ref|XP_004156938.1| PREDICTED: 30S ribosomal protein S1-like [Cucumis sativus]
          Length = 379

 Score =  295 bits (754), Expect = 1e-77
 Identities = 142/196 (72%), Positives = 170/196 (86%)
 Frame = +3

Query: 42  RGSADWEAAKTYIEKGLVYQGRVENFNGGGLLVRFQSLLGFLPFPQLSPSHSCKEPNKSI 221
           R SADW+AA+ Y++ G +Y+GR+E  N GGLLVRF SL+GFLPFPQLSPSHSCKEP KSI
Sbjct: 79  RRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSI 138

Query: 222 QEIARALTGSLISVKVIQADETTKKLILSEKEAIWVKYSPKISVGDIFDARVGSIEDYGA 401
           Q+IA++L GSLISVKVIQADE  +KLI SEKEA   K+S +++VGD+++ +VGS+EDYGA
Sbjct: 139 QDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGA 198

Query: 402 FLHLRFPDGCYHLTGLVHVSEVSWDLVQDVRDILHEGDAVRVKIIKIDRLKSRITLSIKQ 581
           F+HLR  DG YHLTGLVHVSEVSWDLVQDVRDIL EGD V VK+I +++ KSRITLSI+Q
Sbjct: 199 FVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQ 258

Query: 582 LEEDPLLETLDKVIPK 629
           LEEDPLLETLDKVIP+
Sbjct: 259 LEEDPLLETLDKVIPQ 274



 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 44/53 (83%), Positives = 51/53 (96%)
 Frame = +2

Query: 812 VVSQDLQLWLSNSPSIGEQFTLLARAGRQVQEIQMTTTLDQEGIKKALQRVLE 970
           VVSQDLQLWLSN+P + ++FTLLARAGRQVQEIQ+TT+LDQEGIK+ALQRVLE
Sbjct: 324 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE 376


>ref|XP_004152109.1| PREDICTED: 30S ribosomal protein S1-like [Cucumis sativus]
          Length = 378

 Score =  295 bits (754), Expect = 1e-77
 Identities = 142/196 (72%), Positives = 170/196 (86%)
 Frame = +3

Query: 42  RGSADWEAAKTYIEKGLVYQGRVENFNGGGLLVRFQSLLGFLPFPQLSPSHSCKEPNKSI 221
           R SADW+AA+ Y++ G +Y+GR+E  N GGLLVRF SL+GFLPFPQLSPSHSCKEP KSI
Sbjct: 78  RRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFPQLSPSHSCKEPYKSI 137

Query: 222 QEIARALTGSLISVKVIQADETTKKLILSEKEAIWVKYSPKISVGDIFDARVGSIEDYGA 401
           Q+IA++L GSLISVKVIQADE  +KLI SEKEA   K+S +++VGD+++ +VGS+EDYGA
Sbjct: 138 QDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVGDVYEGKVGSVEDYGA 197

Query: 402 FLHLRFPDGCYHLTGLVHVSEVSWDLVQDVRDILHEGDAVRVKIIKIDRLKSRITLSIKQ 581
           F+HLR  DG YHLTGLVHVSEVSWDLVQDVRDIL EGD V VK+I +++ KSRITLSI+Q
Sbjct: 198 FVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVNKNKSRITLSIRQ 257

Query: 582 LEEDPLLETLDKVIPK 629
           LEEDPLLETLDKVIP+
Sbjct: 258 LEEDPLLETLDKVIPQ 273



 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 44/53 (83%), Positives = 51/53 (96%)
 Frame = +2

Query: 812 VVSQDLQLWLSNSPSIGEQFTLLARAGRQVQEIQMTTTLDQEGIKKALQRVLE 970
           VVSQDLQLWLSN+P + ++FTLLARAGRQVQEIQ+TT+LDQEGIK+ALQRVLE
Sbjct: 323 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE 375


>ref|XP_003553029.1| PREDICTED: 40S ribosomal protein S1-like [Glycine max]
          Length = 378

 Score =  292 bits (747), Expect = 9e-77
 Identities = 142/196 (72%), Positives = 165/196 (84%)
 Frame = +3

Query: 42  RGSADWEAAKTYIEKGLVYQGRVENFNGGGLLVRFQSLLGFLPFPQLSPSHSCKEPNKSI 221
           R S+DW+AAKTY +  ++Y GRVE FN GGLLVRF S++GFLPFPQLSP H+ KEP KSI
Sbjct: 78  RRSSDWKAAKTYQDSKVIYNGRVEGFNSGGLLVRFYSVMGFLPFPQLSPVHASKEPEKSI 137

Query: 222 QEIARALTGSLISVKVIQADETTKKLILSEKEAIWVKYSPKISVGDIFDARVGSIEDYGA 401
           QEIA+ L GS++SVKVI ADE  KKLI SEKEA W KYS +++VGDIF+ RVG +EDYGA
Sbjct: 138 QEIAQGLIGSIMSVKVILADEDNKKLIFSEKEAAWSKYSKQVNVGDIFEVRVGYVEDYGA 197

Query: 402 FLHLRFPDGCYHLTGLVHVSEVSWDLVQDVRDILHEGDAVRVKIIKIDRLKSRITLSIKQ 581
           F+HLRFPDG YHLTGL+HVSEVSWDL+QDVRDIL  GD VR K++ ID  KSRI LSI+Q
Sbjct: 198 FVHLRFPDGLYHLTGLIHVSEVSWDLIQDVRDILKVGDEVRAKVVGIDWGKSRINLSIRQ 257

Query: 582 LEEDPLLETLDKVIPK 629
           LEEDPLLETLDKVIP+
Sbjct: 258 LEEDPLLETLDKVIPQ 273



 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 42/53 (79%), Positives = 49/53 (92%)
 Frame = +2

Query: 812 VVSQDLQLWLSNSPSIGEQFTLLARAGRQVQEIQMTTTLDQEGIKKALQRVLE 970
           VVSQDLQLWLSN+P   ++FTLLARAGRQVQEI +TT+LDQEGI++ALQRVLE
Sbjct: 323 VVSQDLQLWLSNAPPTNQRFTLLARAGRQVQEIHLTTSLDQEGIRRALQRVLE 375