BLASTX nr result

ID: Bupleurum21_contig00004602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004602
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524950.1| natural resistance-associated macrophage pro...   315   5e-84
gb|AAF13278.1|AF202539_1 metal transporter Nramp3 [Arabidopsis t...   313   2e-83
ref|NP_179896.1| metal transporter Nramp3 [Arabidopsis thaliana]...   313   2e-83
ref|XP_002880485.1| predicted protein [Arabidopsis lyrata subsp....   313   3e-83
gb|AAW47269.1| Nramp metal transporter-like protein [Noccaea cae...   311   7e-83

>ref|XP_002524950.1| natural resistance-associated macrophage protein, putative [Ricinus
           communis] gi|223535785|gb|EEF37447.1| natural
           resistance-associated macrophage protein, putative
           [Ricinus communis]
          Length = 509

 Score =  315 bits (807), Expect = 5e-84
 Identities = 157/190 (82%), Positives = 169/190 (88%)
 Frame = -1

Query: 572 LLENSNDYEEETAYESTEKVYIIVGXXXXXXXDHATPPFSWRKLWLFTGPGFLMSIAFLD 393
           LL      E++TAY+S EKV+I+         +  TPPFSWRKLWLFTGPGFLMSIAFLD
Sbjct: 12  LLNQEQQEEQDTAYDSDEKVHIV--GIDGDSENEDTPPFSWRKLWLFTGPGFLMSIAFLD 69

Query: 392 PGNLEGDLQAGAVAGYSLLWLLLWATVMGLLVQLLSARLGVATGRHLAELCREEYPTWAG 213
           PGNLEGDLQAGA+AGYSLLWLL+WAT MGLLVQLLSARLGVATGRHLAELCREEYPTWA 
Sbjct: 70  PGNLEGDLQAGAIAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCREEYPTWAR 129

Query: 212 MVLWVMAELALIGSDIQEVIGSAIAIKILSNGVLPLWAGVVITASDCFIFLFLENYGVRK 33
           MVLW+MAELALIG+DIQEVIGSAIAIKILSNGVLPLWAGV+ITA DCFIFLFLENYGVRK
Sbjct: 130 MVLWIMAELALIGADIQEVIGSAIAIKILSNGVLPLWAGVIITACDCFIFLFLENYGVRK 189

Query: 32  LEALFAVLIA 3
           LEA+FAVLIA
Sbjct: 190 LEAVFAVLIA 199


>gb|AAF13278.1|AF202539_1 metal transporter Nramp3 [Arabidopsis thaliana]
          Length = 509

 Score =  313 bits (802), Expect = 2e-83
 Identities = 159/199 (79%), Positives = 171/199 (85%), Gaps = 4/199 (2%)
 Frame = -1

Query: 587 EEEQSLLENSNDYEEETAYESTEKVYIIVGXXXXXXXDHA----TPPFSWRKLWLFTGPG 420
           E  + LL N  + EEETAY+ TEKV+I+                 PPFSW+KLWLFTGPG
Sbjct: 5   ENNEPLLINEEE-EEETAYDETEKVHIVRNEEEDDLEHGVGCGGAPPFSWKKLWLFTGPG 63

Query: 419 FLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLLWATVMGLLVQLLSARLGVATGRHLAELC 240
           FLMSIAFLDPGNLEGDLQAGAVAGYSLLWLL+WAT MGLLVQLLSARLGVATGRHLAELC
Sbjct: 64  FLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELC 123

Query: 239 REEYPTWAGMVLWVMAELALIGSDIQEVIGSAIAIKILSNGVLPLWAGVVITASDCFIFL 60
           R+EYPTWA MVLWVMAELALIGSDIQEVIGSAIAIKILSNG+LPLWAGVVITA DCF+FL
Sbjct: 124 RDEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWAGVVITALDCFVFL 183

Query: 59  FLENYGVRKLEALFAVLIA 3
           FLENYG+RKLEA+FAVLIA
Sbjct: 184 FLENYGIRKLEAVFAVLIA 202


>ref|NP_179896.1| metal transporter Nramp3 [Arabidopsis thaliana]
           gi|29839680|sp|Q9SNV9.2|NRAM3_ARATH RecName: Full=Metal
           transporter Nramp3; Short=AtNramp3
           gi|2642450|gb|AAB87118.1| putative metal ion transporter
           (NRAMP) [Arabidopsis thaliana]
           gi|16648851|gb|AAL25615.1| At2g23150/F21P24.21
           [Arabidopsis thaliana] gi|20197129|gb|AAM14929.1|
           putative metal ion transporter (NRAMP) [Arabidopsis
           thaliana] gi|330252328|gb|AEC07422.1| metal transporter
           Nramp3 [Arabidopsis thaliana]
          Length = 509

 Score =  313 bits (802), Expect = 2e-83
 Identities = 159/199 (79%), Positives = 171/199 (85%), Gaps = 4/199 (2%)
 Frame = -1

Query: 587 EEEQSLLENSNDYEEETAYESTEKVYIIVGXXXXXXXDHA----TPPFSWRKLWLFTGPG 420
           E  + LL N  + EEETAY+ TEKV+I+                 PPFSW+KLWLFTGPG
Sbjct: 5   ENNEPLLINEEE-EEETAYDETEKVHIVRNEEEDDLEHGVGCGGAPPFSWKKLWLFTGPG 63

Query: 419 FLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLLWATVMGLLVQLLSARLGVATGRHLAELC 240
           FLMSIAFLDPGNLEGDLQAGAVAGYSLLWLL+WAT MGLLVQLLSARLGVATGRHLAELC
Sbjct: 64  FLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELC 123

Query: 239 REEYPTWAGMVLWVMAELALIGSDIQEVIGSAIAIKILSNGVLPLWAGVVITASDCFIFL 60
           R+EYPTWA MVLWVMAELALIGSDIQEVIGSAIAIKILSNG+LPLWAGVVITA DCF+FL
Sbjct: 124 RDEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWAGVVITALDCFVFL 183

Query: 59  FLENYGVRKLEALFAVLIA 3
           FLENYG+RKLEA+FAVLIA
Sbjct: 184 FLENYGIRKLEAVFAVLIA 202


>ref|XP_002880485.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326324|gb|EFH56744.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score =  313 bits (801), Expect = 3e-83
 Identities = 159/199 (79%), Positives = 172/199 (86%), Gaps = 8/199 (4%)
 Frame = -1

Query: 575 SLLENS-----NDYEEETAYESTEKVYIIVGXXXXXXXD---HATPPFSWRKLWLFTGPG 420
           S LEN+     N+ EEETAY+ TEKV+I+                PPFSW+KLWLFTGPG
Sbjct: 2   SQLENNEPLLINEEEEETAYDETEKVHIVRNEEEDLEHGVGCGGAPPFSWKKLWLFTGPG 61

Query: 419 FLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLLWATVMGLLVQLLSARLGVATGRHLAELC 240
           FLMSIAFLDPGNLEGDLQAGAVAGYSLLWLL+WAT MGLLVQLLSARLGVATGRHLAELC
Sbjct: 62  FLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELC 121

Query: 239 REEYPTWAGMVLWVMAELALIGSDIQEVIGSAIAIKILSNGVLPLWAGVVITASDCFIFL 60
           R+EYPTWA MVLWVMAELALIGSDIQEVIGSAIAIKILSNG+LPLWAGV+ITA DCF+FL
Sbjct: 122 RDEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWAGVLITALDCFVFL 181

Query: 59  FLENYGVRKLEALFAVLIA 3
           FLENYG+RKLEA+FAVLIA
Sbjct: 182 FLENYGIRKLEAVFAVLIA 200


>gb|AAW47269.1| Nramp metal transporter-like protein [Noccaea caerulescens]
          Length = 512

 Score =  311 bits (797), Expect = 7e-83
 Identities = 154/196 (78%), Positives = 169/196 (86%), Gaps = 6/196 (3%)
 Frame = -1

Query: 572 LLENSNDYEEETAYESTEKVYIIVGXXXXXXXDH------ATPPFSWRKLWLFTGPGFLM 411
           L++  ++ EEETAY+ TEKV+I+                   PPFSWRKLWLFTGPGFLM
Sbjct: 11  LIDRIDEEEEETAYDETEKVHIVRDEDDNERDLEYGVGCGGAPPFSWRKLWLFTGPGFLM 70

Query: 410 SIAFLDPGNLEGDLQAGAVAGYSLLWLLLWATVMGLLVQLLSARLGVATGRHLAELCREE 231
           SIAFLDPGNLEGDLQ+GAVAGYSLLWLL+WAT MGLLVQLLSARLGVATGRHLAELCREE
Sbjct: 71  SIAFLDPGNLEGDLQSGAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCREE 130

Query: 230 YPTWAGMVLWVMAELALIGSDIQEVIGSAIAIKILSNGVLPLWAGVVITASDCFIFLFLE 51
           YP+WAGMVLWVMAELALIGSDIQEVIGSAIAIKIL+NG+LPLWAGV+ITA DCF FLF E
Sbjct: 131 YPSWAGMVLWVMAELALIGSDIQEVIGSAIAIKILTNGILPLWAGVIITALDCFFFLFFE 190

Query: 50  NYGVRKLEALFAVLIA 3
           NYG+RKLEA+FAVLIA
Sbjct: 191 NYGIRKLEAVFAVLIA 206


Top