BLASTX nr result

ID: Bupleurum21_contig00004585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004585
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39738.3| unnamed protein product [Vitis vinifera]              201   3e-49
ref|XP_002267869.1| PREDICTED: protein TIC 20-v, chloroplastic [...   201   3e-49
ref|XP_003544648.1| PREDICTED: tic20 family protein-like [Glycin...   199   7e-49
ref|XP_003519631.1| PREDICTED: tic20 family protein-like isoform...   199   7e-49
ref|XP_003617815.1| Ycf60-like protein [Medicago truncatula] gi|...   197   3e-48

>emb|CBI39738.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score =  201 bits (510), Expect = 3e-49
 Identities = 111/166 (66%), Positives = 116/166 (69%)
 Frame = -1

Query: 691 RRISITXXXXXXXXXXXXDRLISAICYFYPFFDGVQYGKYVINQFXXXXXXXXXLIPAIR 512
           RR SI             DRLISA+CYFYPFFDG+QYGKYV+ QF         L PAI+
Sbjct: 46  RRRSIAAQSKGSNSADPPDRLISAVCYFYPFFDGIQYGKYVLTQFTPIQLLIQPLFPAIK 105

Query: 511 VFKSFPFNGXXXXXXXXXXXVRNPNFSRYVRFNTMQAIVLDVLLIFPDLLERSFNPRXXX 332
           VFKSFPFNG           VRN NFSRYVRFNTMQAIVLDVLLIFPDLLERSFNPR   
Sbjct: 106 VFKSFPFNGFLVFLTLYFVVVRNRNFSRYVRFNTMQAIVLDVLLIFPDLLERSFNPRDGL 165

Query: 331 XXXXXXXXXSTVFLFLLVSLIYGSSSCLFGQVPRLPIVAEAAERQV 194
                    STVFLFLLVSLIYGSSSCL GQVPRLPIVAEAA+RQV
Sbjct: 166 GLDFVMSLDSTVFLFLLVSLIYGSSSCLLGQVPRLPIVAEAADRQV 211


>ref|XP_002267869.1| PREDICTED: protein TIC 20-v, chloroplastic [Vitis vinifera]
          Length = 208

 Score =  201 bits (510), Expect = 3e-49
 Identities = 111/166 (66%), Positives = 116/166 (69%)
 Frame = -1

Query: 691 RRISITXXXXXXXXXXXXDRLISAICYFYPFFDGVQYGKYVINQFXXXXXXXXXLIPAIR 512
           RR SI             DRLISA+CYFYPFFDG+QYGKYV+ QF         L PAI+
Sbjct: 42  RRRSIAAQSKGSNSADPPDRLISAVCYFYPFFDGIQYGKYVLTQFTPIQLLIQPLFPAIK 101

Query: 511 VFKSFPFNGXXXXXXXXXXXVRNPNFSRYVRFNTMQAIVLDVLLIFPDLLERSFNPRXXX 332
           VFKSFPFNG           VRN NFSRYVRFNTMQAIVLDVLLIFPDLLERSFNPR   
Sbjct: 102 VFKSFPFNGFLVFLTLYFVVVRNRNFSRYVRFNTMQAIVLDVLLIFPDLLERSFNPRDGL 161

Query: 331 XXXXXXXXXSTVFLFLLVSLIYGSSSCLFGQVPRLPIVAEAAERQV 194
                    STVFLFLLVSLIYGSSSCL GQVPRLPIVAEAA+RQV
Sbjct: 162 GLDFVMSLDSTVFLFLLVSLIYGSSSCLLGQVPRLPIVAEAADRQV 207


>ref|XP_003544648.1| PREDICTED: tic20 family protein-like [Glycine max]
          Length = 211

 Score =  199 bits (507), Expect = 7e-49
 Identities = 103/147 (70%), Positives = 111/147 (75%)
 Frame = -1

Query: 634 RLISAICYFYPFFDGVQYGKYVINQFXXXXXXXXXLIPAIRVFKSFPFNGXXXXXXXXXX 455
           RLISA+CYFYPFFDG+QYGKYVI QF         L+PAIRVFKSFPFNG          
Sbjct: 64  RLISALCYFYPFFDGIQYGKYVITQFYPLQAIVQPLVPAIRVFKSFPFNGFLVFLTLYFV 123

Query: 454 XVRNPNFSRYVRFNTMQAIVLDVLLIFPDLLERSFNPRXXXXXXXXXXXXSTVFLFLLVS 275
            VRNPNFS+YVRFNTMQA+VLDVLLIFPDLLER FNP+            STVFLFLLV 
Sbjct: 124 VVRNPNFSKYVRFNTMQAVVLDVLLIFPDLLERGFNPKDGLGLDLIMSLDSTVFLFLLVC 183

Query: 274 LIYGSSSCLFGQVPRLPIVAEAAERQV 194
           LIYGSSSCL GQ+PRLPIVAEAA+RQV
Sbjct: 184 LIYGSSSCLLGQIPRLPIVAEAADRQV 210


>ref|XP_003519631.1| PREDICTED: tic20 family protein-like isoform 1 [Glycine max]
           gi|356501640|ref|XP_003519632.1| PREDICTED: tic20 family
           protein-like isoform 2 [Glycine max]
          Length = 211

 Score =  199 bits (507), Expect = 7e-49
 Identities = 103/147 (70%), Positives = 111/147 (75%)
 Frame = -1

Query: 634 RLISAICYFYPFFDGVQYGKYVINQFXXXXXXXXXLIPAIRVFKSFPFNGXXXXXXXXXX 455
           RLISA+CYFYPFFDG+QYGKYVI QF         L+PAIRVFKSFPFNG          
Sbjct: 64  RLISALCYFYPFFDGIQYGKYVITQFYPVQAIVQPLVPAIRVFKSFPFNGFLVFLTLYFV 123

Query: 454 XVRNPNFSRYVRFNTMQAIVLDVLLIFPDLLERSFNPRXXXXXXXXXXXXSTVFLFLLVS 275
            VRNPNFS+YVRFNTMQA+VLDVLLIFPDLLER FNP+            STVFLFLLV 
Sbjct: 124 VVRNPNFSKYVRFNTMQAVVLDVLLIFPDLLERGFNPKDGLGLDLIMSLDSTVFLFLLVC 183

Query: 274 LIYGSSSCLFGQVPRLPIVAEAAERQV 194
           LIYGSSSCL GQ+PRLPIVAEAA+RQV
Sbjct: 184 LIYGSSSCLLGQIPRLPIVAEAADRQV 210


>ref|XP_003617815.1| Ycf60-like protein [Medicago truncatula]
           gi|355519150|gb|AET00774.1| Ycf60-like protein [Medicago
           truncatula]
          Length = 215

 Score =  197 bits (501), Expect = 3e-48
 Identities = 103/147 (70%), Positives = 111/147 (75%)
 Frame = -1

Query: 634 RLISAICYFYPFFDGVQYGKYVINQFXXXXXXXXXLIPAIRVFKSFPFNGXXXXXXXXXX 455
           RLISA+CYFYPFFDG+QYGK+VI QF         LIPAIRVFKSFPFNG          
Sbjct: 68  RLISALCYFYPFFDGIQYGKFVITQFYPIQAIVQPLIPAIRVFKSFPFNGFLVFLTLYFF 127

Query: 454 XVRNPNFSRYVRFNTMQAIVLDVLLIFPDLLERSFNPRXXXXXXXXXXXXSTVFLFLLVS 275
            VRNPNFS+YVRFNTMQAIVLDVLLIFPDLLER FNPR            STVFLFLLV 
Sbjct: 128 VVRNPNFSKYVRFNTMQAIVLDVLLIFPDLLERGFNPRGGFGLDLLMSLDSTVFLFLLVC 187

Query: 274 LIYGSSSCLFGQVPRLPIVAEAAERQV 194
           LIYGSSSC+ GQ+PRLPIVA+AA+RQV
Sbjct: 188 LIYGSSSCILGQLPRLPIVADAADRQV 214


Top