BLASTX nr result

ID: Bupleurum21_contig00004582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004582
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25168.1| unknown [Picea sitchensis]                              80   2e-13
ref|XP_004162485.1| PREDICTED: aspartate--tRNA ligase, cytoplasm...    80   2e-13
ref|XP_004136326.1| PREDICTED: aspartate--tRNA ligase, cytoplasm...    80   2e-13
dbj|BAJ99106.1| predicted protein [Hordeum vulgare subsp. vulgare]     78   9e-13
ref|XP_002283440.1| PREDICTED: aspartyl-tRNA synthetase, cytopla...    78   9e-13

>gb|ABK25168.1| unknown [Picea sitchensis]
          Length = 566

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/62 (56%), Positives = 48/62 (77%)
 Frame = +3

Query: 132 IDEADPLAANYGEIPLFELQSKELPTQTWTEVGSLDESSKDETVLIRGRVHSIRAVSKKM 311
           ++E+DPLA NYG++PL  +QSKE+  + WT VGSL +  KD+ +L+RGR H+IR VS KM
Sbjct: 76  VEESDPLAGNYGDLPLEAVQSKEISGRKWTRVGSLMDELKDQQILVRGRAHAIRGVSSKM 135

Query: 312 AF 317
           AF
Sbjct: 136 AF 137


>ref|XP_004162485.1| PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cucumis
           sativus]
          Length = 545

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +3

Query: 6   DSQEDHTKKPSXXXXXXXXRLRRKQELXXXXXXXXXXXXXXXIDEADPLAANYGEIPLFE 185
           DS +  +KK +        +LRR+QE                  E DPL+ANYG++PL +
Sbjct: 18  DSSKAVSKKAAKKEAAKQEKLRRRQEAAAESAISSLNV------EDDPLSANYGDVPLSD 71

Query: 186 LQSKELPT-QTWTEVGSLDESSKDETVLIRGRVHSIRAVSKKMAF 317
           LQSKE+ + + WT+VGSL    KD+ V++RGRV +IRAV KKMAF
Sbjct: 72  LQSKEVKSIENWTQVGSLTPELKDKYVILRGRVQTIRAVGKKMAF 116


>ref|XP_004136326.1| PREDICTED: aspartate--tRNA ligase, cytoplasmic-like [Cucumis
           sativus]
          Length = 545

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +3

Query: 6   DSQEDHTKKPSXXXXXXXXRLRRKQELXXXXXXXXXXXXXXXIDEADPLAANYGEIPLFE 185
           DS +  +KK +        +LRR+QE                  E DPL+ANYG++PL +
Sbjct: 18  DSSKAVSKKAAKKEAAKQEKLRRRQEAAAESAISSLNV------EDDPLSANYGDVPLSD 71

Query: 186 LQSKELPT-QTWTEVGSLDESSKDETVLIRGRVHSIRAVSKKMAF 317
           LQSKE+ + + WT+VGSL    KD+ V++RGRV +IRAV KKMAF
Sbjct: 72  LQSKEVKSIENWTQVGSLTPELKDKYVILRGRVQTIRAVGKKMAF 116


>dbj|BAJ99106.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 544

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 34/61 (55%), Positives = 48/61 (78%)
 Frame = +3

Query: 135 DEADPLAANYGEIPLFELQSKELPTQTWTEVGSLDESSKDETVLIRGRVHSIRAVSKKMA 314
           +EADP AANYG++P+ E+QSK +  +TWT++G LDE++   +VLIRG   ++R VSKKMA
Sbjct: 54  EEADPFAANYGDVPVEEIQSKVISGRTWTDIGDLDEAAAGRSVLIRGSAQTLRPVSKKMA 113

Query: 315 F 317
           F
Sbjct: 114 F 114


>ref|XP_002283440.1| PREDICTED: aspartyl-tRNA synthetase, cytoplasmic [Vitis vinifera]
          Length = 544

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/104 (40%), Positives = 58/104 (55%)
 Frame = +3

Query: 6   DSQEDHTKKPSXXXXXXXXRLRRKQELXXXXXXXXXXXXXXXIDEADPLAANYGEIPLFE 185
           D  +  +KK +        + RR+QE                 D  DPLA+NYG++PL +
Sbjct: 14  DEAKAQSKKAAKKEAAKLEKQRRRQEAASSAASASVAGISIG-DTPDPLASNYGDVPLLD 72

Query: 186 LQSKELPTQTWTEVGSLDESSKDETVLIRGRVHSIRAVSKKMAF 317
           LQSKE+    WT++G+L E  KD+ VLIRGR  +IRAV K +AF
Sbjct: 73  LQSKEVTGLKWTDIGALTEDLKDQKVLIRGRAQTIRAVGKNIAF 116


Top