BLASTX nr result

ID: Bupleurum21_contig00004572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004572
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22590.3| unnamed protein product [Vitis vinifera]              138   4e-31
ref|XP_003634116.1| PREDICTED: probable LRR receptor-like serine...   138   4e-31
emb|CBI24611.3| unnamed protein product [Vitis vinifera]              133   1e-29
ref|XP_002266475.1| PREDICTED: LRR receptor-like serine/threonin...   126   2e-27
emb|CAN79130.1| hypothetical protein VITISV_029207 [Vitis vinifera]   126   2e-27

>emb|CBI22590.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/146 (48%), Positives = 89/146 (60%)
 Frame = -3

Query: 440 DFGLNKLSGKVPSWIGEDLPNLYALILKSNSFYERMPREICHLSNLHFLDLSINKISGTI 261
           D G NKL G +PSWIG  LPNL  L L+ N FY  +P ++C L  +  LDLS N ISG I
Sbjct: 346 DLGRNKLCGNIPSWIGRSLPNLVVLNLRFNEFYGSIPMDMCQLKKIQILDLSNNNISGMI 405

Query: 260 PPCFGSLTAMIHKGTQVTEHIYSTGLSIPQDVASAPLPPNSSYYDNAVARWKGHEFEYGR 81
           P CF + TAM+ +G+ V  + Y    +IP      PL   SSY D  + +WKG E EY +
Sbjct: 406 PRCFNNFTAMVQQGSLVITYNY----TIP---CFKPLSRPSSYVDKQMVQWKGRELEYEK 458

Query: 80  NFAFLKMIDLSTNELTGEIPTEITRL 3
               LK IDLS+NEL+GEIP E+T L
Sbjct: 459 TLGLLKSIDLSSNELSGEIPREVTNL 484


>ref|XP_003634116.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g36180-like [Vitis vinifera]
          Length = 975

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/146 (48%), Positives = 89/146 (60%)
 Frame = -3

Query: 440  DFGLNKLSGKVPSWIGEDLPNLYALILKSNSFYERMPREICHLSNLHFLDLSINKISGTI 261
            D G NKL G +PSWIG  LPNL  L L+ N FY  +P ++C L  +  LDLS N ISG I
Sbjct: 680  DLGRNKLCGNIPSWIGRSLPNLVVLNLRFNEFYGSIPMDMCQLKKIQILDLSNNNISGMI 739

Query: 260  PPCFGSLTAMIHKGTQVTEHIYSTGLSIPQDVASAPLPPNSSYYDNAVARWKGHEFEYGR 81
            P CF + TAM+ +G+ V  + Y    +IP      PL   SSY D  + +WKG E EY +
Sbjct: 740  PRCFNNFTAMVQQGSLVITYNY----TIP---CFKPLSRPSSYVDKQMVQWKGRELEYEK 792

Query: 80   NFAFLKMIDLSTNELTGEIPTEITRL 3
                LK IDLS+NEL+GEIP E+T L
Sbjct: 793  TLGLLKSIDLSSNELSGEIPREVTNL 818


>emb|CBI24611.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  133 bits (335), Expect = 1e-29
 Identities = 73/147 (49%), Positives = 86/147 (58%), Gaps = 1/147 (0%)
 Frame = -3

Query: 440 DFGLNKLSGKVPSWIGEDLPNLYALILKSNSFYERMPREICHLSNLHFLDLSINKISGTI 261
           D G N+LSGK+P WIG  LPNL  L L+SN F   +  E+C L  +  LDLS N ISG I
Sbjct: 345 DLGKNRLSGKIPLWIGGSLPNLTILSLRSNRFSGSICSELCQLKKIQILDLSSNDISGVI 404

Query: 260 PPCFGSLTAMIHKGTQVTEHIYSTGLSIPQDVASAPLP-PNSSYYDNAVARWKGHEFEYG 84
           P C  + TAM  KG+ V  H YS G    +D    PL   N SY D A+ +WKG EFEY 
Sbjct: 405 PRCLNNFTAMTKKGSLVVAHNYSFGSFAYKD----PLKFKNESYVDEALIKWKGSEFEYK 460

Query: 83  RNFAFLKMIDLSTNELTGEIPTEITRL 3
                ++ IDLS N L GEIP EIT L
Sbjct: 461 NTLGLIRSIDLSRNNLLGEIPKEITDL 487


>ref|XP_002266475.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO2-like [Vitis vinifera]
          Length = 1485

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/146 (43%), Positives = 85/146 (58%)
 Frame = -3

Query: 440  DFGLNKLSGKVPSWIGEDLPNLYALILKSNSFYERMPREICHLSNLHFLDLSINKISGTI 261
            D G NKLSGK+P WIG  L NL  + L+SN F   +P  +C L  +H LDLS N +SGTI
Sbjct: 652  DLGKNKLSGKIPGWIGGSLSNLIVVNLRSNEFNGSIPLNLCQLKKIHMLDLSSNNLSGTI 711

Query: 260  PPCFGSLTAMIHKGTQVTEHIYSTGLSIPQDVASAPLPPNSSYYDNAVARWKGHEFEYGR 81
            P C  +L+ M   G+ V        ++  +D+       + SYYDN + +WKG E EY +
Sbjct: 712  PKCLNNLSGMAQNGSLV--------ITYEEDLL---FLMSLSYYDNTLVQWKGKELEYNK 760

Query: 80   NFAFLKMIDLSTNELTGEIPTEITRL 3
                +K ID S N+L GEIPTE+T L
Sbjct: 761  TLGLVKSIDFSNNKLIGEIPTEVTDL 786


>emb|CAN79130.1| hypothetical protein VITISV_029207 [Vitis vinifera]
          Length = 1107

 Score =  126 bits (317), Expect = 2e-27
 Identities = 71/144 (49%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
 Frame = -3

Query: 431  LNKLSGKVPSWIGEDLPNLYALILKSNSFYERMPREICHLSNLHFLDLSINKISGTIPPC 252
            L KLSGK+P WIG  LPNL  L L+SN     +  E+C L  +  LDLS N ISG IP C
Sbjct: 790  LYKLSGKIPLWIGGSLPNLTILSLRSNRXSGSICSELCQLKKIQILDLSSNDISGVIPRC 849

Query: 251  FGSLTAMIHKGTQVTEHIYSTGLSIPQDVASAPLP-PNSSYYDNAVARWKGHEFEYGRNF 75
              + TAM  KG+ V  H YS G    +D    PL   N SY D A+ +WKG EFEY    
Sbjct: 850  LNNFTAMTKKGSLVVAHNYSFGSFAYKD----PLKFKNESYVDEALIKWKGSEFEYKNTL 905

Query: 74   AFLKMIDLSTNELTGEIPTEITRL 3
              ++ IDLS N L GEIP EIT L
Sbjct: 906  GLIRSIDLSRNNLLGEIPKEITDL 929


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