BLASTX nr result

ID: Bupleurum21_contig00004518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004518
         (1536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278544.1| PREDICTED: protein ABCI7, chloroplastic-like...   570   e-166
emb|CBI33903.3| unnamed protein product [Vitis vinifera]              570   e-166
emb|CAN69419.1| hypothetical protein VITISV_028794 [Vitis vinifera]   568   e-166
ref|XP_004148492.1| PREDICTED: protein ABCI7, chloroplastic-like...   553   e-161
ref|XP_003631753.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI...   550   e-160

>ref|XP_002278544.1| PREDICTED: protein ABCI7, chloroplastic-like [Vitis vinifera]
          Length = 495

 Score =  570 bits (1468), Expect(2) = e-166
 Identities = 285/413 (69%), Positives = 338/413 (81%)
 Frame = -1

Query: 1239 LQKLRDFSSESLLSTPWPSRKDEPFRFTDTSFIKKSQIVPILSPPSQSFNLFVDSQQPIF 1060
            LQKLRD SS+++LSTPWPSRKDEPFRFTDTS I+ SQ+ PI  PP+ S  +  D+Q   F
Sbjct: 82   LQKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTPISHPPT-SIAISTDTQ---F 137

Query: 1059 PNVAIVDGYIVDSLSNLSALPDGVFVGSLTNLDSEVIVKRVSDFVSSNPGDLFWSLNGVG 880
            PN++IVDG+IV SLSNLS LP GVFVGSL++L SE I K+VS+FV++  GDLFWSLNG+G
Sbjct: 138  PNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKVSEFVANFEGDLFWSLNGLG 197

Query: 879  APDLVVVYVPEGCVVDTPLHLRYFSDKVENKESNLLPFSNPRVLXXXXXXXXXXXXXXXX 700
             PD+ VVYVP GC V+ PLH+ Y+S +  +  S  LP SNPRV                 
Sbjct: 198  TPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYV 257

Query: 699  XXXGDKCYWANSVMEVVVGEGAKLAHSYIQNQSLEAAHIKWTSVRQESTSTYKLIEVSTG 520
                +KCYWAN+V EVV+GEGAK+ HSYIQ+QSL AAHIKWTSV+Q S+S+Y+LIEVSTG
Sbjct: 258  GVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKWTSVQQGSSSSYELIEVSTG 317

Query: 519  GKLSRHNLHVQQVGPDTLTELSTFHLSISDQTQDLHSKLVLDHPRGVTRQLHKCIVAHSS 340
            GKLSRHN+++QQVGPDT+TELS FHLS+ DQTQDLHS+LVLDHPRG +RQLHKCIVAHS 
Sbjct: 318  GKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSL 377

Query: 339  GQAVFDGNVQVNREAQQTDAGQLTRTLLLEPRATVNLKPNLQIIADDVKCSHGAAVCDLE 160
            GQAVFDGN++VNR AQ+TDAGQLTR+LLLEPRATVN+KPNLQIIADDVKCSHGAA+ DLE
Sbjct: 378  GQAVFDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 437

Query: 159  ENQLFYFQARGVDLQTARKALIFSFGAEVIDHFPNKSIQKKVENHVKKLLDPS 1
            ENQLFYF ARG+DL+TARKALIFSFG EVI+  P  SI+KKVE H+K LL+P+
Sbjct: 438  ENQLFYFLARGIDLETARKALIFSFGGEVIERLPYSSIRKKVETHIKALLEPT 490



 Score = 44.3 bits (103), Expect(2) = e-166
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
 Frame = -3

Query: 1501 SMAVSTFAPIFHITPNES--NSLSKFKLPTTKIKPNFTKARVFATLSDPFVLQIAETLED 1328
            +MA +  +P   + P  S  NS SKF  P ++  P     ++ A  SDPFVLQIAE+LED
Sbjct: 15   TMAATLLSPHLLLNPKLSIQNSASKFPTPKSRSTP-----KIRAAFSDPFVLQIAESLED 69

Query: 1327 S 1325
            S
Sbjct: 70   S 70


>emb|CBI33903.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  570 bits (1468), Expect(2) = e-166
 Identities = 285/413 (69%), Positives = 338/413 (81%)
 Frame = -1

Query: 1239 LQKLRDFSSESLLSTPWPSRKDEPFRFTDTSFIKKSQIVPILSPPSQSFNLFVDSQQPIF 1060
            LQKLRD SS+++LSTPWPSRKDEPFRFTDTS I+ SQ+ PI  PP+ S  +  D+Q   F
Sbjct: 67   LQKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTPISHPPT-SIAISTDTQ---F 122

Query: 1059 PNVAIVDGYIVDSLSNLSALPDGVFVGSLTNLDSEVIVKRVSDFVSSNPGDLFWSLNGVG 880
            PN++IVDG+IV SLSNLS LP GVFVGSL++L SE I K+VS+FV++  GDLFWSLNG+G
Sbjct: 123  PNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKVSEFVANFEGDLFWSLNGLG 182

Query: 879  APDLVVVYVPEGCVVDTPLHLRYFSDKVENKESNLLPFSNPRVLXXXXXXXXXXXXXXXX 700
             PD+ VVYVP GC V+ PLH+ Y+S +  +  S  LP SNPRV                 
Sbjct: 183  TPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYV 242

Query: 699  XXXGDKCYWANSVMEVVVGEGAKLAHSYIQNQSLEAAHIKWTSVRQESTSTYKLIEVSTG 520
                +KCYWAN+V EVV+GEGAK+ HSYIQ+QSL AAHIKWTSV+Q S+S+Y+LIEVSTG
Sbjct: 243  GVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKWTSVQQGSSSSYELIEVSTG 302

Query: 519  GKLSRHNLHVQQVGPDTLTELSTFHLSISDQTQDLHSKLVLDHPRGVTRQLHKCIVAHSS 340
            GKLSRHN+++QQVGPDT+TELS FHLS+ DQTQDLHS+LVLDHPRG +RQLHKCIVAHS 
Sbjct: 303  GKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSL 362

Query: 339  GQAVFDGNVQVNREAQQTDAGQLTRTLLLEPRATVNLKPNLQIIADDVKCSHGAAVCDLE 160
            GQAVFDGN++VNR AQ+TDAGQLTR+LLLEPRATVN+KPNLQIIADDVKCSHGAA+ DLE
Sbjct: 363  GQAVFDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 422

Query: 159  ENQLFYFQARGVDLQTARKALIFSFGAEVIDHFPNKSIQKKVENHVKKLLDPS 1
            ENQLFYF ARG+DL+TARKALIFSFG EVI+  P  SI+KKVE H+K LL+P+
Sbjct: 423  ENQLFYFLARGIDLETARKALIFSFGGEVIERLPYSSIRKKVETHIKALLEPT 475



 Score = 43.9 bits (102), Expect(2) = e-166
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
 Frame = -3

Query: 1498 MAVSTFAPIFHITPNES--NSLSKFKLPTTKIKPNFTKARVFATLSDPFVLQIAETLEDS 1325
            MA +  +P   + P  S  NS SKF  P ++  P     ++ A  SDPFVLQIAE+LEDS
Sbjct: 1    MAATLLSPHLLLNPKLSIQNSASKFPTPKSRSTP-----KIRAAFSDPFVLQIAESLEDS 55


>emb|CAN69419.1| hypothetical protein VITISV_028794 [Vitis vinifera]
          Length = 593

 Score =  568 bits (1465), Expect(2) = e-166
 Identities = 285/413 (69%), Positives = 337/413 (81%)
 Frame = -1

Query: 1239 LQKLRDFSSESLLSTPWPSRKDEPFRFTDTSFIKKSQIVPILSPPSQSFNLFVDSQQPIF 1060
            LQKLRD SS+++LSTPWPSRKDEPFRFTDTS I+ SQ+ PI  PP+ S  +  D+Q   F
Sbjct: 82   LQKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTPISHPPT-SIAISTDTQ---F 137

Query: 1059 PNVAIVDGYIVDSLSNLSALPDGVFVGSLTNLDSEVIVKRVSDFVSSNPGDLFWSLNGVG 880
            PN++IVDG+IV SLSNLS LP GVFVGSL++L SE I K VS+FV++  GDLFWSLNG+G
Sbjct: 138  PNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKXVSEFVANFEGDLFWSLNGLG 197

Query: 879  APDLVVVYVPEGCVVDTPLHLRYFSDKVENKESNLLPFSNPRVLXXXXXXXXXXXXXXXX 700
             PD+ VVYVP GC V+ PLH+ Y+S +  +  S  LP SNPRV                 
Sbjct: 198  TPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNPRVFVLVEEGGEIGVIEEYV 257

Query: 699  XXXGDKCYWANSVMEVVVGEGAKLAHSYIQNQSLEAAHIKWTSVRQESTSTYKLIEVSTG 520
                +KCYWAN+V EVV+GEGAK+ HSYIQ+QSL AAHIKWTSV+Q S+S+Y+LIEVSTG
Sbjct: 258  GVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKWTSVQQGSSSSYELIEVSTG 317

Query: 519  GKLSRHNLHVQQVGPDTLTELSTFHLSISDQTQDLHSKLVLDHPRGVTRQLHKCIVAHSS 340
            GKLSRHN+++QQVGPDT+TELS FHLS+ DQTQDLHS+LVLDHPRG +RQLHKCIVAHS 
Sbjct: 318  GKLSRHNVNIQQVGPDTVTELSAFHLSVGDQTQDLHSRLVLDHPRGYSRQLHKCIVAHSL 377

Query: 339  GQAVFDGNVQVNREAQQTDAGQLTRTLLLEPRATVNLKPNLQIIADDVKCSHGAAVCDLE 160
            GQAVFDGN++VNR AQ+TDAGQLTR+LLLEPRATVN+KPNLQIIADDVKCSHGAA+ DLE
Sbjct: 378  GQAVFDGNIKVNRYAQRTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLE 437

Query: 159  ENQLFYFQARGVDLQTARKALIFSFGAEVIDHFPNKSIQKKVENHVKKLLDPS 1
            ENQLFYF ARG+DL+TARKALIFSFG EVI+  P  SI+KKVE H+K LL+P+
Sbjct: 438  ENQLFYFLARGIDLETARKALIFSFGGEVIERLPYSSIRKKVETHIKALLEPT 490



 Score = 44.3 bits (103), Expect(2) = e-166
 Identities = 26/59 (44%), Positives = 34/59 (57%)
 Frame = -3

Query: 1501 SMAVSTFAPIFHITPNESNSLSKFKLPTTKIKPNFTKARVFATLSDPFVLQIAETLEDS 1325
            +MA S  +P   + P  S   S  K PT K +   +  ++ A  SDPFVLQIAE+LEDS
Sbjct: 15   TMAASLLSPHLLLNPKLSIQTSASKFPTPKSR---STPKIRAAFSDPFVLQIAESLEDS 70


>ref|XP_004148492.1| PREDICTED: protein ABCI7, chloroplastic-like [Cucumis sativus]
            gi|449521999|ref|XP_004168016.1| PREDICTED: protein
            ABCI7, chloroplastic-like [Cucumis sativus]
          Length = 496

 Score =  553 bits (1426), Expect(2) = e-161
 Identities = 278/416 (66%), Positives = 336/416 (80%), Gaps = 3/416 (0%)
 Frame = -1

Query: 1239 LQKLRDFSSESLLSTPWPSRKDEPFRFTDTSFIKKSQIVPILSPP--SQSFNLFVDSQQP 1066
            LQKLR+ S+E+LLSTPWPSR+DEPFRFTD SFIK+SQI PI +PP  S+  ++ +++Q  
Sbjct: 80   LQKLRESSAENLLSTPWPSRRDEPFRFTDVSFIKQSQIHPISNPPQFSELSSIPLETQ-- 137

Query: 1065 IFPNVAIVDGYIVDSLSNLSALPDGVFVGSLTNLDSEVIVKRVSDFVSSN-PGDLFWSLN 889
             F NV IVDG+ V+S+SNL+ LP+GV+VGS  +L SE + KRVS+FV     GDLFWS+N
Sbjct: 138  -FANVVIVDGHFVNSVSNLTELPNGVYVGSFIDLPSESVGKRVSEFVDGKFAGDLFWSIN 196

Query: 888  GVGAPDLVVVYVPEGCVVDTPLHLRYFSDKVENKESNLLPFSNPRVLXXXXXXXXXXXXX 709
            GVGAPDL VVYVP GC V+ P+H RY+S    ++ S  L  SNPRVL             
Sbjct: 197  GVGAPDLTVVYVPAGCKVENPIHFRYYSINGGDEGSKELAVSNPRVLVLVENGGEIEIIE 256

Query: 708  XXXXXXGDKCYWANSVMEVVVGEGAKLAHSYIQNQSLEAAHIKWTSVRQESTSTYKLIEV 529
                  G K YW+N V+EVV+G G K+ HSYIQNQSL AAHIKWTSV+QESTS Y+L+E+
Sbjct: 257  EFLSGDGGKSYWSNPVLEVVIGSGGKVKHSYIQNQSLNAAHIKWTSVQQESTSAYELVEI 316

Query: 528  STGGKLSRHNLHVQQVGPDTLTELSTFHLSISDQTQDLHSKLVLDHPRGVTRQLHKCIVA 349
            STGG+LSRHN+H+QQ+GP+T TELST HLSI +QTQDLHS LVLDHPRG +RQLHKCIVA
Sbjct: 317  STGGRLSRHNVHIQQLGPETTTELSTLHLSIGNQTQDLHSSLVLDHPRGYSRQLHKCIVA 376

Query: 348  HSSGQAVFDGNVQVNREAQQTDAGQLTRTLLLEPRATVNLKPNLQIIADDVKCSHGAAVC 169
            +  GQAVFDGNV+VNR AQQTDAGQLTR+LLLEPRATVN+KPNLQIIADDVKCSHGAA+ 
Sbjct: 377  NPQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAIS 436

Query: 168  DLEENQLFYFQARGVDLQTARKALIFSFGAEVIDHFPNKSIQKKVENHVKKLLDPS 1
            DLEE QLFYFQARG+DL+TARKALIFSFGAEVI+  P+ S++K+VENH+K+LL+P+
Sbjct: 437  DLEETQLFYFQARGIDLETARKALIFSFGAEVIERLPSPSVRKRVENHIKELLNPT 492



 Score = 43.1 bits (100), Expect(2) = e-161
 Identities = 34/69 (49%), Positives = 38/69 (55%), Gaps = 11/69 (15%)
 Frame = -3

Query: 1498 MAVSTFAPIFHI---TPNESNSLSKFKLPTTKIKPNF---TKARVFA-----TLSDPFVL 1352
            MA  TF P  HI    P  S S+S     T+K KP F   T  RV       +LSDPFVL
Sbjct: 1    MATFTFTP--HIGGRLPTPSLSVSSSYSSTSKRKPKFNSITTTRVSLQASTPSLSDPFVL 58

Query: 1351 QIAETLEDS 1325
            Q+AETLEDS
Sbjct: 59   QLAETLEDS 67


>ref|XP_003631753.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
            [Vitis vinifera]
          Length = 527

 Score =  550 bits (1417), Expect(2) = e-160
 Identities = 281/418 (67%), Positives = 330/418 (78%), Gaps = 6/418 (1%)
 Frame = -1

Query: 1239 LQKLRDFSSESLLSTPWPSRKDEPFRFTDTSFIKKSQIVPILSPPSQSFNLFVDSQQPIF 1060
            LQKLRD SS+++LSTPWPSRKDEPFRFTDTS I+ SQ+ PI  PP+ S  +  D+Q   F
Sbjct: 67   LQKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQVTPISHPPT-SIAISTDTQ---F 122

Query: 1059 PNVAIVDGYIVDSLSNLSALPDGVFVGSLTNLDSEVIVKRVSDFVSSNPGDLFWSLNGVG 880
            PN+ IVDG+I+ SLSNLS LP GVFVGSL++L SE I KRVS+FV++  GDLFWSLNG+G
Sbjct: 123  PNLCIVDGHIIYSLSNLSQLPTGVFVGSLSSLPSETITKRVSEFVANFEGDLFWSLNGLG 182

Query: 879  APDLVVVYVPEGCVVDTPLHLRYFSDKVENKESNLLPFSNPRVLXXXXXXXXXXXXXXXX 700
              D+VVVYVP GC V+ PLH+ Y S +  +     LP SNPRV                 
Sbjct: 183  TLDMVVVYVPAGCRVEMPLHIVYXSVEGGDIGFKKLPVSNPRVFVLVEEGGEIGEIEEFV 242

Query: 699  XXXGDKCYWANSVMEV------VVGEGAKLAHSYIQNQSLEAAHIKWTSVRQESTSTYKL 538
                +KCYWAN+V EV      V+GEGAK+ HSYIQ+QSL AAHIKWTSV+Q S+ +Y+L
Sbjct: 243  GGGENKCYWANAVTEVRIIIILVIGEGAKVKHSYIQSQSLSAAHIKWTSVQQGSSGSYEL 302

Query: 537  IEVSTGGKLSRHNLHVQQVGPDTLTELSTFHLSISDQTQDLHSKLVLDHPRGVTRQLHKC 358
            IEVSTGGKLSRHN+++QQVGPDT+TELS FHLS+ D TQDLH++LVLDHPRG  RQLHKC
Sbjct: 303  IEVSTGGKLSRHNVNIQQVGPDTVTELSAFHLSVGDPTQDLHTRLVLDHPRGYFRQLHKC 362

Query: 357  IVAHSSGQAVFDGNVQVNREAQQTDAGQLTRTLLLEPRATVNLKPNLQIIADDVKCSHGA 178
            IVAHS GQAVFDGN++VNR AQQTDAGQLTR+LLLEPRATVN+KPNLQIIADDVKCSHGA
Sbjct: 363  IVAHSLGQAVFDGNIKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGA 422

Query: 177  AVCDLEENQLFYFQARGVDLQTARKALIFSFGAEVIDHFPNKSIQKKVENHVKKLLDP 4
            A+ DLEENQLFYF ARG+DL+TARK LIFSFG EVI+  P  SI+KKVE H+K LL+P
Sbjct: 423  AISDLEENQLFYFLARGIDLETARKTLIFSFGDEVIERLPYSSIRKKVETHIKALLEP 480



 Score = 42.0 bits (97), Expect(2) = e-160
 Identities = 25/58 (43%), Positives = 33/58 (56%)
 Frame = -3

Query: 1498 MAVSTFAPIFHITPNESNSLSKFKLPTTKIKPNFTKARVFATLSDPFVLQIAETLEDS 1325
            MA +  +P   + P  S   S  K PT K +   +  ++ AT SDPFV QIAE+LEDS
Sbjct: 1    MAATLLSPHLLLNPKLSIQTSASKFPTPKSR---STPKIRATFSDPFVPQIAESLEDS 55


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