BLASTX nr result

ID: Bupleurum21_contig00004507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004507
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272180.1| PREDICTED: mitochondrial outer membrane prot...   366   5e-99
emb|CAN64922.1| hypothetical protein VITISV_017201 [Vitis vinifera]   364   2e-98
ref|XP_002329628.1| porin/voltage-dependent anion-selective chan...   352   6e-95
gb|AAQ87023.1| VDAC3.1 [Lotus japonicus]                              352   6e-95
ref|NP_001242891.1| uncharacterized protein LOC100790270 [Glycin...   351   1e-94

>ref|XP_002272180.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           [Vitis vinifera] gi|297735387|emb|CBI17827.3| unnamed
           protein product [Vitis vinifera]
          Length = 277

 Score =  366 bits (939), Expect = 5e-99
 Identities = 184/277 (66%), Positives = 214/277 (77%), Gaps = 1/277 (0%)
 Frame = +3

Query: 6   MGNGPALYSTIGKRAKDLLTKDYNYDHKILLSVPSSTGMGLVATGSKMDQFFVGDISTEY 185
           MGNGPA +S IGK+ +DLL KDYN+DHK  L + S  GMG+ ATG K DQ F GD+ST Y
Sbjct: 1   MGNGPAPFSDIGKKTRDLLNKDYNFDHKFTLLMQSPGGMGVTATGWKKDQIFFGDVSTLY 60

Query: 186 KSGNTTVNVKVDTFSSVSTKVTINDVLPCMTAACSFDIPDHKSGKLDLHYLHDRAAISSS 365
           KSGNTTV++K+DT S+VSTKVT +D+LPC   ACSF IPDHKSGKLD+ YLH  AAI SS
Sbjct: 61  KSGNTTVDLKLDTHSNVSTKVTAHDILPCTKVACSFKIPDHKSGKLDVQYLHPHAAIDSS 120

Query: 366 IGLNPSPLLELTAAIGDKGLSLGGEVGLNTASSSFTKYNAGISFNRPDFSAALILLDKGQ 545
           IGLNP+PLLEL+AAIG K LSLGGEVGLNTAS+SFTKYNAGI  N+PDFS A++L DKG+
Sbjct: 121 IGLNPTPLLELSAAIGSKDLSLGGEVGLNTASASFTKYNAGIGINKPDFSVAVLLTDKGE 180

Query: 546 TLKASYVQSVNSS-TGTELAFEMIHRXXXXXXXXXXXXXHLVDPLTRVKTRFSNDGKVAM 722
           TLKASY+ SVN    GT +A E+ H+             H+VDP T VKTR SN+GK AM
Sbjct: 181 TLKASYIHSVNPPYGGTTVAAELTHKFNTYENSFTIGSAHVVDPYTMVKTRLSNNGKFAM 240

Query: 723 LCQREWRPKSLITVSAEHDTKAINAAPKVGITLALKP 833
           LCQREWRPKSLITVS E+D KA N A K+G+ LALKP
Sbjct: 241 LCQREWRPKSLITVSGEYDPKANNGATKLGLALALKP 277


>emb|CAN64922.1| hypothetical protein VITISV_017201 [Vitis vinifera]
          Length = 277

 Score =  364 bits (934), Expect = 2e-98
 Identities = 183/277 (66%), Positives = 213/277 (76%), Gaps = 1/277 (0%)
 Frame = +3

Query: 6   MGNGPALYSTIGKRAKDLLTKDYNYDHKILLSVPSSTGMGLVATGSKMDQFFVGDISTEY 185
           MGNGPA +S IGK+ +DLL KDYN+DHK  L + S  GMG+ ATG K DQ F GD+ST Y
Sbjct: 1   MGNGPAPFSDIGKKTRDLLNKDYNFDHKFTLLMQSPGGMGVTATGWKKDQIFFGDVSTLY 60

Query: 186 KSGNTTVNVKVDTFSSVSTKVTINDVLPCMTAACSFDIPDHKSGKLDLHYLHDRAAISSS 365
           KSGNTTV++K+DT S+VSTKVT +D+LPC   ACSF IPDHKSGKLD+ YLH  AAI SS
Sbjct: 61  KSGNTTVDLKLDTHSNVSTKVTAHDILPCTKVACSFKIPDHKSGKLDVQYLHPHAAIDSS 120

Query: 366 IGLNPSPLLELTAAIGDKGLSLGGEVGLNTASSSFTKYNAGISFNRPDFSAALILLDKGQ 545
           IGLNP+PLLEL+AAIG K LSLGGEVGLNTAS+SFTKYNAGI  N+PDFS A++L DKG+
Sbjct: 121 IGLNPTPLLELSAAIGSKDLSLGGEVGLNTASASFTKYNAGIGINKPDFSVAVLLTDKGE 180

Query: 546 TLKASYVQSVNSS-TGTELAFEMIHRXXXXXXXXXXXXXHLVDPLTRVKTRFSNDGKVAM 722
           TLKASY+ SVN    GT +A E+ H+             H+VDP T  KTR SN+GK AM
Sbjct: 181 TLKASYIHSVNPPYGGTTVAAELTHKFNTYENSFTIGSAHVVDPYTMXKTRLSNNGKFAM 240

Query: 723 LCQREWRPKSLITVSAEHDTKAINAAPKVGITLALKP 833
           LCQREWRPKSLITVS E+D KA N A K+G+ LALKP
Sbjct: 241 LCQREWRPKSLITVSGEYDPKANNGATKLGLALALKP 277


>ref|XP_002329628.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|222870509|gb|EEF07640.1|
           porin/voltage-dependent anion-selective channel protein
           [Populus trichocarpa]
          Length = 275

 Score =  352 bits (904), Expect = 6e-95
 Identities = 187/277 (67%), Positives = 210/277 (75%), Gaps = 1/277 (0%)
 Frame = +3

Query: 6   MGNGPALYSTIGKRAKDLLTKDYNYDHKILLSVPSSTGMGLVATGSKMDQFFVGDISTEY 185
           MG+ PA +S IGKRAKDLLTKDYNYDHK  LS+ SSTGM   ATG K D+ FVGDI+T Y
Sbjct: 1   MGSKPAPFSDIGKRAKDLLTKDYNYDHKFTLSILSSTGMAFTATGLKKDEVFVGDINTLY 60

Query: 186 KSGNTTVNVKVDTFSSVSTKVTINDVLPCMTAACSFDIPDHKSGKLDLHYLHDRAAISSS 365
           KS NT V+VKVDT+S+VSTKVT+ND+LP   AA SF IPDHKSGKLD+ Y H  AAI SS
Sbjct: 61  KSKNTVVDVKVDTYSNVSTKVTVNDILPSTKAAFSFKIPDHKSGKLDVQYFHHHAAIESS 120

Query: 366 IGLNPSPLLELTAAIGDKGLSLGGEVGLNTASSSFTKYNAGISFNRPDFSAALILLDKGQ 545
           IGLNP+PLL+ +AAIG   LSLGGEVG +TASSSF KYNAGI  N+PDFSAAL+L DKGQ
Sbjct: 121 IGLNPNPLLDFSAAIGSSNLSLGGEVGFDTASSSFIKYNAGIGLNKPDFSAALLLTDKGQ 180

Query: 546 TLKASYVQSVNSSTGTELAFEMIHRXXXXXXXXXXXXXHLVDPLTRVKTRFSNDGKVAML 725
           TLKASYV SVN      +A EM HR             H VDP T VKTRFS++GK AML
Sbjct: 181 TLKASYVHSVNPF--HSVAAEMTHRFSSLENSFTIGSSHAVDPFTVVKTRFSDNGKAAML 238

Query: 726 CQREWRPKSLITVSAEHDTKAINAA-PKVGITLALKP 833
            Q EWRPKSLIT SAE+D+KA +AA PK GI LALKP
Sbjct: 239 YQHEWRPKSLITFSAEYDSKATHAANPKYGIALALKP 275


>gb|AAQ87023.1| VDAC3.1 [Lotus japonicus]
          Length = 277

 Score =  352 bits (904), Expect = 6e-95
 Identities = 177/277 (63%), Positives = 213/277 (76%), Gaps = 1/277 (0%)
 Frame = +3

Query: 6   MGNGPALYSTIGKRAKDLLTKDYNYDHKILLSVPSSTGMGLVATGSKMDQFFVGDISTEY 185
           M NGPALY  IGKRA+DLL KDYN+D K  LS+PSSTG+GL+ATG K DQ F+GDI+T Y
Sbjct: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60

Query: 186 KSGNTTVNVKVDTFSSVSTKVTINDVLPCMTAACSFDIPDHKSGKLDLHYLHDRAAISSS 365
           KSGN TV+VKVDT+S+VSTKVT+ND+  C   A SF+IPDHKSGKLD+ YLH  AAI SS
Sbjct: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120

Query: 366 IGLNPSPLLELTAAIGDKGLSLGGEVGLNTASSSFTKYNAGISFNRPDFSAALILLDKGQ 545
           IGLNPSP LEL+ AIG K L +G EVG NT S+SFTKYNAGI+FNRPDFSAAL+L+DKG+
Sbjct: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGK 180

Query: 546 TLKASYVQSVNSSTGTELAFEMIHRXXXXXXXXXXXXXHLVDPLTRVKTRFSNDGKVAML 725
           +LKASY+  V+   G  +A E+ HR              L+DP T +KTRFS+DGK A L
Sbjct: 181 SLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFL 240

Query: 726 CQREWRPKSLITVSAEHD-TKAINAAPKVGITLALKP 833
           CQR WRPKSLIT+SAE+D TK   ++ K+G+ LAL+P
Sbjct: 241 CQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277


>ref|NP_001242891.1| uncharacterized protein LOC100790270 [Glycine max]
           gi|255635086|gb|ACU17901.1| unknown [Glycine max]
          Length = 277

 Score =  351 bits (901), Expect = 1e-94
 Identities = 178/277 (64%), Positives = 212/277 (76%), Gaps = 1/277 (0%)
 Frame = +3

Query: 6   MGNGPALYSTIGKRAKDLLTKDYNYDHKILLSVPSSTGMGLVATGSKMDQFFVGDISTEY 185
           M NGPA +S IGKRAKDLL KDYN+DHK  LS+P+STG+GL+ATG K DQ FVGDIST Y
Sbjct: 1   MANGPAPFSEIGKRAKDLLYKDYNFDHKFSLSIPNSTGLGLIATGLKKDQIFVGDISTLY 60

Query: 186 KSGNTTVNVKVDTFSSVSTKVTINDVLPCMTAACSFDIPDHKSGKLDLHYLHDRAAISSS 365
           KSGNTTV+VKVDT+S++STKVT+ND+L    AA SF+IPDHKSGKLD+ YLH  AA+ SS
Sbjct: 61  KSGNTTVDVKVDTYSNISTKVTVNDILHGTKAALSFNIPDHKSGKLDVQYLHPHAAVDSS 120

Query: 366 IGLNPSPLLELTAAIGDKGLSLGGEVGLNTASSSFTKYNAGISFNRPDFSAALILLDKGQ 545
           IGLNPSPLLEL+AAIG K + LG EVG NT S+SFTKYNAG++FN+PDFSAAL+L DKGQ
Sbjct: 121 IGLNPSPLLELSAAIGSKDVCLGAEVGFNTTSASFTKYNAGVAFNKPDFSAALLLADKGQ 180

Query: 546 TLKASYVQSVNSSTGTELAFEMIHRXXXXXXXXXXXXXHLVDPLTRVKTRFSNDGKVAML 725
           TLKASY+  V+   G  +A E+ H                +D  T VKTRFS+DGK A+ 
Sbjct: 181 TLKASYINYVDRPDGFTVAAEISHSFSTFENRFTIGSSQSIDSKTVVKTRFSDDGKAALQ 240

Query: 726 CQREWRPKSLITVSAEHD-TKAINAAPKVGITLALKP 833
           CQR WRP SLIT+SAE+D TK   ++ K G+ LALKP
Sbjct: 241 CQRAWRPNSLITLSAEYDSTKIFGSSTKFGLALALKP 277


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