BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004398
         (1459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin...   445   e-122
ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin...   437   e-120
ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin...   424   e-116
ref|XP_002511264.1| nucleic acid binding protein, putative [Rici...   406   e-111
ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [...   399   e-108

>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
            [Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
            protein product [Vitis vinifera]
          Length = 484

 Score =  445 bits (1145), Expect = e-122
 Identities = 213/389 (54%), Positives = 276/389 (70%), Gaps = 23/389 (5%)
 Frame = -1

Query: 1297 KEEQQYFENYEYASNGK-EQYDGEAQWYPNVEGDSMGFYDQISGNYQHPLRPDAEDCSFY 1121
            + E++  E+ E  SNG+ +  D E +   N+E +S    D+ S  +Q+P+RPDA DCSFY
Sbjct: 80   EREEEKEEDEESDSNGEVKASDDEEEQCENLEDESAAKDDK-SARFQYPVRPDAVDCSFY 138

Query: 1120 MRTGNCKFGLNCKFNHPLNRTNQAPRDTFKQKE--EFSDRSGQIECKYYLTADGCKYGKA 947
            +RTG CKFG NCKFNHP+ R NQ  ++  K+KE  EF +R GQ ECKYYL   GCK+GKA
Sbjct: 139  LRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKA 198

Query: 946  CRYNHSRARPAVAPVVDFNFLGLPIRVGEKECAYYMKNGSCKYGSNCRFNHPNPTAVGGG 767
            CRYNH++A+P+  PV++ NFLGLPIR+GEKEC YYM+ GSCKYG+NCRFNHP+PTA GG 
Sbjct: 199  CRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGY 258

Query: 766  DSAS----------QGSIKDTASGWSSARTYNDSAPFVPVIYPPSP-TAPPNTEWNGYQA 620
            +S S          QG+ +   + WSS R  N+ APFVP+++ P+    PPN EWNGYQA
Sbjct: 259  ESPSGYGNGGSVPLQGASQSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQA 318

Query: 619  PVH--RTSERNLPIPPAFAMNGPPSGANFYAH--SQKQMVVEEFPERPGQPECSFYLKTG 452
            P++     ER++  PPAF +N   + AN Y H   Q+Q ++E+FPERPGQPECS++LKTG
Sbjct: 319  PLYPPPPPERSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTG 378

Query: 451  DCKYRSSCKFDHPKNR---KTSFSLSERGLPIRPDQNICTHYSRYGICKFGPACKYDHSI 281
            DCK+R++CK+ HPKNR       +LS++GLP+RPDQNICTHY+RYGICKFGPACK+DH +
Sbjct: 379  DCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHPV 438

Query: 280  TNGNSVS--SVGSDQGQPPRYGKLGDADG 200
              GNS S  S  S Q QPP +G    ADG
Sbjct: 439  NYGNSASAPSAESGQDQPPPFGGSVTADG 467


>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
            [Vitis vinifera]
          Length = 481

 Score =  437 bits (1124), Expect = e-120
 Identities = 210/387 (54%), Positives = 272/387 (70%), Gaps = 21/387 (5%)
 Frame = -1

Query: 1297 KEEQQYFENYEYASNGK-EQYDGEAQWYPNVEGDSMGFYDQISGNYQHPLRPDAEDCSFY 1121
            + E++  E+ E  SNG+ +  D E +   N+E +S    D+ S  +Q+P+RPDA DCSFY
Sbjct: 80   EREEEKEEDEESDSNGEVKASDDEEEQCENLEDESAAKDDK-SARFQYPVRPDAVDCSFY 138

Query: 1120 MRTGNCKFGLNCKFNHPLNRTNQAPRDTFKQKE--EFSDRSGQIECKYYLTADGCKYGKA 947
            +RTG CKFG NCKFNHP+ R NQ  ++  K+KE  EF +R GQ ECKYYL   GCK+GKA
Sbjct: 139  LRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKA 198

Query: 946  CRYNHSRARPAVAPVVDFNFLGLPIRVGEKECAYYMKNGSCKYGSNCRFNHPNPTAVGGG 767
            CRYNH++A+P+  PV++ NFLGLPIR+GEKEC YYM+ GSCKYG+NCRFNHP+PTA GG 
Sbjct: 199  CRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGY 258

Query: 766  DSAS----------QGSIKDTASGWSSARTYNDSAPFVPVIYPPSP-TAPPNTEWNGYQA 620
            +S S          QG+ +   + WSS R  N+ APFVP+++ P+    PPN EWNGYQ 
Sbjct: 259  ESPSGYGNGGSVPLQGASQSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQV 318

Query: 619  PVHRTSERNLPIPPAFAMNGPPSGANFYAH--SQKQMVVEEFPERPGQPECSFYLKTGDC 446
                  +R++  PPAF +N   + AN Y H   Q+Q ++E+FPERPGQPECS++LKTGDC
Sbjct: 319  -FMLLLKRSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDC 377

Query: 445  KYRSSCKFDHPKNR---KTSFSLSERGLPIRPDQNICTHYSRYGICKFGPACKYDHSITN 275
            K+R++CK+ HPKNR       +LS++GLP+RPDQNICTHY+RYGICKFGPACK+DH +  
Sbjct: 378  KFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHPVNY 437

Query: 274  GNSVS--SVGSDQGQPPRYGKLGDADG 200
            GNS S  S  S Q QPP +G    ADG
Sbjct: 438  GNSASAPSAESGQDQPPPFGGSVTADG 464


>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
            [Glycine max]
          Length = 570

 Score =  424 bits (1091), Expect = e-116
 Identities = 198/353 (56%), Positives = 254/353 (71%), Gaps = 14/353 (3%)
 Frame = -1

Query: 1303 GGKEEQQYFENYEYASNGKEQYDGEAQWYPNVEGDSMGFYDQISGNYQHPLRPDAEDCSF 1124
            GG E     EN     +  ++  G+ +    V+G+      Q     Q+PLRP+AEDC+F
Sbjct: 190  GGDEGCDCIENVNVNESESDKVGGDVE---GVKGERSSGRAQ-----QYPLRPEAEDCAF 241

Query: 1123 YMRTGNCKFGLNCKFNHPLNRTNQAPRDTFKQKEEFSDRSGQIECKYYLTADGCKYGKAC 944
            Y++TG CKFG NCKFNHPL R NQA ++   ++EE ++RSGQ+ECKYYL + GCK+GKAC
Sbjct: 242  YLKTGTCKFGFNCKFNHPLRRKNQAKKENAGEREEQAERSGQMECKYYLRSGGCKFGKAC 301

Query: 943  RYNHSRARPAVAPVVDFNFLGLPIRVGEKECAYYMKNGSCKYGSNCRFNHPNPTAVGGGD 764
            ++NH+R + + A   + NFLGLPIRVGEKEC YYM+ GSCK+G+NCRFNHP+PT VGGGD
Sbjct: 302  KFNHTRGKSSSASATELNFLGLPIRVGEKECLYYMRTGSCKFGANCRFNHPDPTTVGGGD 361

Query: 763  SAS----------QGSIKDTASGWSSARTYNDSAPFVPVIYPPSP-TAPPNTEWNGYQAP 617
            S S          QG  + + S WSS R  N+SAPFVPVI  P+P  +P ++EWNGYQAP
Sbjct: 362  SPSGYGNGSSISLQGVSQSSISSWSSTRPLNESAPFVPVILSPNPGVSPQSSEWNGYQAP 421

Query: 616  VHRTSERNLPIPPAFAMNGPPSGANFYAHSQKQMVVEEFPERPGQPECSFYLKTGDCKYR 437
            V+  SER+L  P  + MN P   +N Y H QKQM+VEEFPERPG+PECS++LKTGDCK++
Sbjct: 422  VY-LSERSLHPPSTYVMNNPAMESNVYMHHQKQMLVEEFPERPGEPECSYFLKTGDCKFK 480

Query: 436  SSCKFDHPKNRKTSF---SLSERGLPIRPDQNICTHYSRYGICKFGPACKYDH 287
            S+CKF HPKNR       +LS++GLP+RPDQN+CT+Y RYGICKFGPACK+DH
Sbjct: 481  SNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTYYRRYGICKFGPACKFDH 533



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 35/90 (38%), Positives = 54/90 (60%)
 Frame = -1

Query: 1024 EEFSDRSGQIECKYYLTADGCKYGKACRYNHSRARPAVAPVVDFNFLGLPIRVGEKECAY 845
            EEF +R G+ EC Y+L    CK+   C+++H + R A  P+ + +  GLP+R  +  C Y
Sbjct: 457  EEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTY 516

Query: 844  YMKNGSCKYGSNCRFNHPNPTAVGGGDSAS 755
            Y + G CK+G  C+F+HP P+ + G D  S
Sbjct: 517  YRRYGICKFGPACKFDHPAPSTMAGHDQQS 546



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
 Frame = -1

Query: 508 EEFPERPGQPECSFYLKTGDCKYRSSCKFDHPKNRKTSFSLSERG----LPIRPDQNICT 341
           +++P RP   +C+FYLKTG CK+  +CKF+HP  RK        G       R  Q  C 
Sbjct: 228 QQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRKNQAKKENAGEREEQAERSGQMECK 287

Query: 340 HYSRYGICKFGPACKYDHSITNGNSVSSVGSD---QGQPPRYGK 218
           +Y R G CKFG ACK++H  T G S S+  ++    G P R G+
Sbjct: 288 YYLRSGGCKFGKACKFNH--TRGKSSSASATELNFLGLPIRVGE 329


>ref|XP_002511264.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223550379|gb|EEF51866.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 495

 Score =  406 bits (1043), Expect = e-111
 Identities = 202/426 (47%), Positives = 273/426 (64%), Gaps = 21/426 (4%)
 Frame = -1

Query: 1447 EGSKWSEIEDQEEYGNSQVVEGTKEAVGNYEXXXXXXXXXXXXXXDRIGGKEEQQY-FEN 1271
            E  K  E++ ++++ +    EG K+++G ++                 GG+EEQ+Y   N
Sbjct: 57   EEKKLEEVDKEDDFDD----EGEKDSIGWHQDDGFNSGESN-------GGEEEQEYNINN 105

Query: 1270 YEYASNGKEQYDGEAQWYPNVEGDSMGFYDQISGNYQHPLRPDAEDCSFYMRTGNCKFGL 1091
             +Y   G +  D +       +  S    ++    YQ+P+RP+AEDCS+YM+TG CKFG 
Sbjct: 106  NDYDKVGNDDDDDDD--VEKKDERSNNGVNRRHNQYQYPVRPEAEDCSYYMKTGTCKFGS 163

Query: 1090 NCKFNHPLNRTNQAPRDTFKQKEEFSDRSGQIECKYYLTADGCKYGKACRYNHSRARP-- 917
            NCKFNHP+ R  Q  ++  K++EE +DR GQ ECKYYL   GCKYGKACRYNHSRA+P  
Sbjct: 164  NCKFNHPVKRKMQVSKEKVKEREEATDRPGQTECKYYLRTGGCKYGKACRYNHSRAKPLL 223

Query: 916  -----AVAPVVDFNFLGLPIRVGEKECAYYMKNGSCKYGSNCRFNHPNPTAVGGGD---- 764
                 AV P +D NFLGLPIR GE+EC YYM+NGSCKYG+NCRFNHP+PT VGG D    
Sbjct: 224  LQAKTAVFPALDLNFLGLPIRPGERECPYYMRNGSCKYGANCRFNHPDPTTVGGSDPLAF 283

Query: 763  ----SAS-QGSIKDTASGWSSARTYNDSAPFVPVIYPPSPTAP-PNTEWNGYQAPVHRTS 602
                SAS Q S++   + WSS    N++  F+ +++ P+   P  N EWNGYQ       
Sbjct: 284  SNGGSASLQNSLQSNIASWSSPGGLNETPSFMSIMFSPTQGVPSQNPEWNGYQVCYFPLY 343

Query: 601  ERNLPIPPAFAMNGPPSGANFYAHSQKQMVVEEFPERPGQPECSFYLKTGDCKYRSSCKF 422
            ER++  PPA+ ++ P +  N YAH Q+Q+ VEEFPERPGQPECS+++KTGDCK++S+CK+
Sbjct: 344  ERSMHQPPAYVISNPATDTNVYAH-QQQIQVEEFPERPGQPECSYFMKTGDCKFKSNCKY 402

Query: 421  DHPKN---RKTSFSLSERGLPIRPDQNICTHYSRYGICKFGPACKYDHSITNGNSVSSVG 251
             HPKN   +     LS++GLP+RP QNIC++YSRYGICKFGPACK+DH I   +S +   
Sbjct: 403  HHPKNHISKSPPCVLSDKGLPLRPGQNICSYYSRYGICKFGPACKFDHPIQPVSSTTGSA 462

Query: 250  SDQGQP 233
             D   P
Sbjct: 463  DDVRMP 468


>ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355504462|gb|AES85665.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 511

 Score =  399 bits (1024), Expect = e-108
 Identities = 184/326 (56%), Positives = 238/326 (73%), Gaps = 16/326 (4%)
 Frame = -1

Query: 1210 VEGDSMGFYDQIS--GNYQHPLRPDAEDCSFYMRTGNCKFGLNCKFNHPLNRTNQAPRDT 1037
            +E +  G  D+ S  G  Q+PLRP+AEDCSFY++TG CKFG NCKFNHPL R NQ  R+ 
Sbjct: 152  IENEVSGDVDERSNGGAEQYPLRPEAEDCSFYLKTGTCKFGFNCKFNHPLGRRNQVFRER 211

Query: 1036 FKQKEEFSDRSGQIECKYYLTADGCKYGKACRYNHSRARPAVAPVVDFNFLGLPIRVGEK 857
              +++E  +RS Q ECKYY  + GCK+GK C+++H+R + +   V++ NFLGLPIR+GEK
Sbjct: 212  AGERDELEERSSQTECKYYSRSGGCKFGKDCKFDHTRGKFSADQVLELNFLGLPIRLGEK 271

Query: 856  ECAYYMKNGSCKYGSNCRFNHPNPTAVGGGDS------ASQGSIKDTASG----WSSART 707
            EC YYM+ GSCK+G+NC+FNHP+PT+VGG DS       S  S++D +      WSS R 
Sbjct: 272  ECPYYMRTGSCKFGANCKFNHPDPTSVGGYDSTAGYGNGSTTSLQDVSQSSTPPWSSTRK 331

Query: 706  YNDSAPFVPVIYPPSPTAPP-NTEWNGYQAPVHRTSERNLPIPPAFAMNGPPSGANFYAH 530
            +N++APFVP+I  P+P A P +++WNGYQAP +  SER++  P  +A+N P    N Y H
Sbjct: 332  FNETAPFVPIIISPTPGASPRSSDWNGYQAPFY-LSERSMHPPSPYAVNNPAMEMNAYMH 390

Query: 529  SQKQMVVEEFPERPGQPECSFYLKTGDCKYRSSCKFDHPKNRKTSF---SLSERGLPIRP 359
              K   VEEFPERPG+PECSF+LKTGDCK++S CKF HPKNR T     +LS++GLP+RP
Sbjct: 391  RHKHTPVEEFPERPGEPECSFFLKTGDCKFKSHCKFHHPKNRITKLPPCNLSDKGLPLRP 450

Query: 358  DQNICTHYSRYGICKFGPACKYDHSI 281
             QN+CTHYSRYGICKFGPACKYDH I
Sbjct: 451  GQNVCTHYSRYGICKFGPACKYDHPI 476