BLASTX nr result

ID: Bupleurum21_contig00004296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004296
         (1348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15797.3| unnamed protein product [Vitis vinifera]              280   6e-73
ref|XP_003518350.1| PREDICTED: putative B3 domain-containing pro...   259   1e-66
ref|XP_002276000.1| PREDICTED: putative B3 domain-containing pro...   254   5e-65
ref|XP_003597798.1| B3 domain-containing protein [Medicago trunc...   249   9e-64
ref|XP_002533342.1| DNA binding protein, putative [Ricinus commu...   230   6e-58

>emb|CBI15797.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  280 bits (716), Expect = 6e-73
 Identities = 158/306 (51%), Positives = 198/306 (64%), Gaps = 9/306 (2%)
 Frame = +2

Query: 62  ARKQRLLENKKRFEDLGILKISKSLADGTKSETP-QRRQPKPRATSIDILELXXXXXXXX 238
           ARKQ L ENKKR EDLGILKIS+SL+  T S +  Q+R PKP+  S+ +LE         
Sbjct: 8   ARKQHLEENKKRLEDLGILKISQSLSLLTNSNSKSQKRPPKPKPESVYMLEPRRSSRVRN 67

Query: 239 XXXXXXDDIAIELPPTRKRSRFNSSWTSYLARPVDEVKSATYEERLAALNCAEKLHCNLQ 418
                 D++ I L P RKRS+ NSSW SYLARP++EV +A+YEER+ A+  AE++  NLQ
Sbjct: 68  SVASYCDEVDISLRPLRKRSKLNSSWASYLARPLNEVITASYEERVHAIKAAEEIQSNLQ 127

Query: 419 SEHPYFIKSMVRSHVYSCFWLGLPTAFCESYLPKSDGNVEIVLEDENATEYEAVYICKRT 598
           S +P F+KSMVRSHVYSCFWLGLP+ FCE +LPK+   +++VLEDEN TEY AVYI KRT
Sbjct: 128 SGNPSFVKSMVRSHVYSCFWLGLPSKFCEDHLPKT--LLDMVLEDENGTEYGAVYIGKRT 185

Query: 599 GLSGGWRAFALDHKLDDGDALVFELIEPTRFKVYIVRASDDSSKEKILGVTKEDKISKEI 778
           GLSGGWR FALDHKLDDGDALVFELIEP RFKVYIVRAS+ SSK+    V +    +K  
Sbjct: 186 GLSGGWRGFALDHKLDDGDALVFELIEPARFKVYIVRASEVSSKKNDADVDEVHSAAKRR 245

Query: 779 TVKATGKTK--------SKKGVDSVRVSSRKKTCNGPSLDNDTLDMDEESKDSLEMKTED 934
           + +AT   K         +K    V  SS      G  + N+    D  + +    +   
Sbjct: 246 SKRATRLNKCNESEPKQDRKSTQKVIESSESTVHQGGGVKNEDELEDVNATEGPRKRITR 305

Query: 935 KKKPTR 952
            K+ T+
Sbjct: 306 SKRLTK 311


>ref|XP_003518350.1| PREDICTED: putative B3 domain-containing protein At5g58280-like
           [Glycine max]
          Length = 374

 Score =  259 bits (662), Expect = 1e-66
 Identities = 155/312 (49%), Positives = 195/312 (62%), Gaps = 1/312 (0%)
 Frame = +2

Query: 26  MPGNSNSNTYEEARKQRLLENKKRFEDLGILKISKSLADGTKSETPQRRQPKPRATSIDI 205
           M    ++NTYEEARKQRL ENKKRFEDLGI +ISK+L +   S        K +  +ID 
Sbjct: 1   MAKGCSNNTYEEARKQRLEENKKRFEDLGISRISKNLTEIASS-------AKKKLVNID- 52

Query: 206 LELXXXXXXXXXXXXXXDDIAIELPPTRKRSR-FNSSWTSYLARPVDEVKSATYEERLAA 382
                                  LPP RKRSR  +SSW SY+ARP+DE+K AT EERL A
Sbjct: 53  -----------------------LPPLRKRSRSSSSSWGSYIARPLDEIKEATKEERLCA 89

Query: 383 LNCAEKLHCNLQSEHPYFIKSMVRSHVYSCFWLGLPTAFCESYLPKSDGNVEIVLEDENA 562
           L  AE +  NL S +P FIKSMVRSHVYSCFWLGLP+ FCE +LPK+    ++VLEDEN 
Sbjct: 90  LEAAEAIQINLNSSNPSFIKSMVRSHVYSCFWLGLPSKFCEEHLPKT--LHDMVLEDENG 147

Query: 563 TEYEAVYICKRTGLSGGWRAFALDHKLDDGDALVFELIEPTRFKVYIVRASDDSSKEKIL 742
           +EYEAVYI  R GLSGGWRAFALDHKLDDGDALVFELIE +RFK+YIVRA  DS +EK  
Sbjct: 148 SEYEAVYIGNRAGLSGGWRAFALDHKLDDGDALVFELIEASRFKIYIVRAFPDSVEEKGN 207

Query: 743 GVTKEDKISKEITVKATGKTKSKKGVDSVRVSSRKKTCNGPSLDNDTLDMDEESKDSLEM 922
            + +E     E  V+AT   K+   ++S   + + K     +   +T + +   +  L+ 
Sbjct: 208 NILEE-----EGNVRATKAPKAACNLESECKTKKPK----QAAVYETKESESSQEYLLDS 258

Query: 923 KTEDKKKPTRVS 958
             +++ KP  V+
Sbjct: 259 SIDNEVKPQGVN 270


>ref|XP_002276000.1| PREDICTED: putative B3 domain-containing protein At5g58280-like
           [Vitis vinifera]
          Length = 244

 Score =  254 bits (648), Expect = 5e-65
 Identities = 134/228 (58%), Positives = 167/228 (73%), Gaps = 8/228 (3%)
 Frame = +2

Query: 44  SNTYEEARKQRLLENKKRFEDLGILKISKSLADGTKSETP---QRRQPKPRATSIDILEL 214
           +++YEEARKQ L ENKKR EDLGILKIS+SL+  T S +    Q+R PKP+  S+ +LE 
Sbjct: 4   ASSYEEARKQHLEENKKRLEDLGILKISQSLSLLTNSNSKSQIQKRPPKPKPESVYMLEP 63

Query: 215 XXXXXXXXXXXXXXDDIAIEL-----PPTRKRSRFNSSWTSYLARPVDEVKSATYEERLA 379
                         D+++I +         + S+ NSSW SYLARP++EV +A+YEER+ 
Sbjct: 64  RRSSRVRNSVASYCDEVSIYVFHLLATEDLRMSKLNSSWASYLARPLNEVITASYEERVH 123

Query: 380 ALNCAEKLHCNLQSEHPYFIKSMVRSHVYSCFWLGLPTAFCESYLPKSDGNVEIVLEDEN 559
           A+  AE++  NLQS +P F+KSMVRSHVYSCFWLGLP+ FCE +LPK+   +++VLEDEN
Sbjct: 124 AIKAAEEIQSNLQSGNPSFVKSMVRSHVYSCFWLGLPSKFCEDHLPKT--LLDMVLEDEN 181

Query: 560 ATEYEAVYICKRTGLSGGWRAFALDHKLDDGDALVFELIEPTRFKVYI 703
            TEY AVYI KRTGLSGGWR FALDHKLDDGDALVFELIEP RFKVY+
Sbjct: 182 GTEYGAVYIGKRTGLSGGWRGFALDHKLDDGDALVFELIEPARFKVYL 229


>ref|XP_003597798.1| B3 domain-containing protein [Medicago truncatula]
            gi|355486846|gb|AES68049.1| B3 domain-containing protein
            [Medicago truncatula]
          Length = 727

 Score =  249 bits (637), Expect = 9e-64
 Identities = 139/315 (44%), Positives = 195/315 (61%), Gaps = 7/315 (2%)
 Frame = +2

Query: 35   NSNSNTYEEARKQRLLENKKRFEDLGILKISKSLAD-GTKSETPQRRQPKPRATSIDILE 211
            ++ SN YE AR+QRL+ENKKRFEDLGI KISK+L +  + ++    R  +P++ +  +LE
Sbjct: 323  STTSNNYEAAREQRLVENKKRFEDLGISKISKTLTEIASPAKKSTNRLFRPKSKTNVVLE 382

Query: 212  LXXXXXXXXXXXXXXDDIAIELPPTRKRSRFNSSWTSYL--ARPVDEVKSATYEERLAAL 385
                           ++   +LP  R+R+R +SSW SY   ARP+DE+K AT +ER  A 
Sbjct: 383  PRRSSRARNSVPSYAEEFGTDLPQLRRRARSSSSWGSYAYAARPLDEIKVATAQERKRAW 442

Query: 386  NCAEKLHCNLQSEHPYFIKSMVRSHVYSCFWLGLPTAFCESYLPKSDGNVEIVLEDENAT 565
            + AE L  NLQS +P FIKSM+RSHVYSCFWLGLP+ FC  +LPK+D    +VLEDE   
Sbjct: 443  DAAEALQINLQSSNPIFIKSMLRSHVYSCFWLGLPSRFCVEHLPKTD--YTMVLEDEKGL 500

Query: 566  EYEAVYICKRTGLSGGWRAFALDHKLDDGDALVFELIEPTRFKVYIVRA----SDDSSKE 733
            EY+AVY+ ++TGLSGGWR FAL+HKLDDGDA+VFEL+E  RFKVYIVRA     ++  KE
Sbjct: 501  EYDAVYLARKTGLSGGWRGFALEHKLDDGDAVVFELVEAARFKVYIVRAFENIDEEEEKE 560

Query: 734  KILGVTKEDKISKEITVKATGKTKSKKGVDSVRVSSRKKTCNGPSLDNDTLDMDEESKDS 913
            +   + ++  +    T+K +   K K+     R+   +K    P+ +  +  +  E    
Sbjct: 561  ESDALVEDGNMCTSKTIKKSETVKPKEATKKTRM---QKVSKVPTHEPKSETVKSEETSR 617

Query: 914  LEMKTEDKKKPTRVS 958
                +  K+K + VS
Sbjct: 618  TTRSSHKKQKISDVS 632


>ref|XP_002533342.1| DNA binding protein, putative [Ricinus communis]
           gi|223526822|gb|EEF29041.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 212

 Score =  230 bits (587), Expect = 6e-58
 Identities = 127/229 (55%), Positives = 157/229 (68%), Gaps = 9/229 (3%)
 Frame = +2

Query: 35  NSNSNTYEEARKQRLLENKKRFEDLGILKISKSLADGTKSETPQRRQPKPRATSIDILEL 214
           N NSNTYEEARK RL ENKKRFEDLGI KISKSL++ T   TP+++      T +DI   
Sbjct: 5   NGNSNTYEEARKLRLKENKKRFEDLGISKISKSLSNLT---TPEKK------TKMDI--- 52

Query: 215 XXXXXXXXXXXXXXDDIAIELPPTRKRSRFNSSWT---------SYLARPVDEVKSATYE 367
                              +LPP RK    +SSWT         SY+ARP+DEVK A+YE
Sbjct: 53  -------------------DLPPLRK----SSSWTVAIILWIFFSYVARPLDEVKLASYE 89

Query: 368 ERLAALNCAEKLHCNLQSEHPYFIKSMVRSHVYSCFWLGLPTAFCESYLPKSDGNVEIVL 547
           +R  AL  AE+   +LQS +P F+KSMVRSHVYSCFWLGLPT FC+++LPK D  ++++L
Sbjct: 90  DRTRALKAAEEFQNSLQSGNPSFVKSMVRSHVYSCFWLGLPTQFCKNHLPKKD--LDMIL 147

Query: 548 EDENATEYEAVYICKRTGLSGGWRAFALDHKLDDGDALVFELIEPTRFK 694
           ED+N + Y+A Y+  RTGLSGGWR FALDHKLDDGDA+VFEL+EP +FK
Sbjct: 148 EDDNGSTYDAKYLGNRTGLSGGWRGFALDHKLDDGDAVVFELVEPDKFK 196


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