BLASTX nr result

ID: Bupleurum21_contig00004175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004175
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EGG14258.1| putative importin subunit alpha B [Dictyostelium ...    69   4e-10
ref|XP_003566399.1| PREDICTED: importin subunit alpha-1a-like [B...    67   1e-09
ref|XP_003554623.1| PREDICTED: importin subunit alpha-1b-like [G...    67   1e-09
emb|CBN79488.1| conserved unknown protein [Ectocarpus siliculosus]     67   2e-09
ref|XP_003521670.1| PREDICTED: importin subunit alpha-1-like [Gl...    65   6e-09

>gb|EGG14258.1| putative importin subunit alpha B [Dictyostelium fasciculatum]
          Length = 511

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
 Frame = +2

Query: 86  AVTALGAIVRWGSCSDIEVIIEKNALRWIRCCLDMKDKWFVKNGCWIVSNIIAKTENHIK 265
           A+  +G IV  G  S  +VI+  +AL  +   L    K   K  CW +SNI A  +  I+
Sbjct: 293 ALRTVGNIVT-GDDSQTQVILNVSALPLLGNLLTNPKKAIKKEACWTISNITAGNKKQIQ 351

Query: 266 DVLTPRLIGLLVSIVEYWKLLGVKKEAAWAISNAVFGAEPSEIEGL-KQHLVKPLWSLVQ 442
           DV+   +I  LV++++  +   +KKEAAWAISNA  G  P +IE L +Q  + PL  L++
Sbjct: 352 DVIDANIIPALVNLLKNAE-FEIKKEAAWAISNATSGGSPQQIEYLVRQGCIPPLCELLR 410


>ref|XP_003566399.1| PREDICTED: importin subunit alpha-1a-like [Brachypodium distachyon]
          Length = 522

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
 Frame = +2

Query: 80  IAAVTALGAIVRWGSCSDIEVIIEKNALRWIRCCLDMKDKWFVKN-GCWIVSNIIAKTEN 256
           I A+  +G IV  G  S  + II+  AL  +   L    K  +K   CW VSNI A  ++
Sbjct: 299 IPALRTVGNIVT-GDDSQTQCIIDHQALACLLSLLTQNHKKSIKKEACWTVSNITAGNKD 357

Query: 257 HIKDVLTPRLIGLLVSIVEYWKLLGVKKEAAWAISNAVFGAEPSEIEGL-KQHLVKPLWS 433
            I+ V+   +IG LV +++  +   +KKEAAWAISNA  G    +I+ L  +  +KPL  
Sbjct: 358 QIQAVINAGIIGPLVHLLQTAE-FDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCD 416

Query: 434 LVQSLYKVREIVSICLRAL 490
           L+  +     IV++CL  L
Sbjct: 417 LL--ICPDSRIVTVCLEGL 433


>ref|XP_003554623.1| PREDICTED: importin subunit alpha-1b-like [Glycine max]
          Length = 532

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 51/139 (36%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
 Frame = +2

Query: 80  IAAVTALGAIVRWGSCSDIEVIIEKNAL-RWIRCCLDMKDKWFVKNGCWIVSNIIAKTEN 256
           I A+  +G IV  G     EVII   AL R +    +   K   K  CW +SNI A  + 
Sbjct: 304 IPALRTVGNIVT-GDDLQTEVIINHQALSRLLNLLTNNYKKSIKKEACWTISNITAGNKK 362

Query: 257 HIKDVLTPRLIGLLVSIVEYWKLLGVKKEAAWAISNAVFGAEPSEIEGL-KQHLVKPLWS 433
            I+DV+   +I  LV +++  +   +KKEAAWAISNA  G    +I+ L  Q  +KPL  
Sbjct: 363 QIQDVIEASIIAPLVHLLQNAE-FDIKKEAAWAISNATSGGSHEQIKFLVSQGCIKPLCD 421

Query: 434 LVQSLYKVREIVSICLRAL 490
           L+  +     IV++CL  L
Sbjct: 422 LL--ICPDPRIVTVCLEGL 438


>emb|CBN79488.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 556

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
 Frame = +2

Query: 86  AVTALGAIVRWGSCSDIEVIIEKNALRWIRCCLDMKDKWFVKNGCWIVSNIIAKTENHIK 265
           A+  +G IV  G     +VII  NAL W+   L    K   K  CW +SNI A  +  I+
Sbjct: 321 ALRTVGNIVT-GDDLQTQVIINFNALPWLLNLLSSSKKGIRKEACWTISNITAGNKEQIQ 379

Query: 266 DVLTPRLIGLLVSIVEYWKLLGVKKEAAWAISNAVFGAEPSEIEGL-KQHLVKPLWSLVQ 442
            V+   +I  L+ ++   +   ++KEAAWAISNA  G +P +I+ L  +  + PL  L++
Sbjct: 380 AVIDANIIPPLIQLLSNAE-FDIRKEAAWAISNATSGGKPEQIKYLVTEGCIPPLSDLLE 438

Query: 443 SLYKVREIVSICLRAL 490
                 +IV++ L  L
Sbjct: 439 --VHDAKIVTVALEGL 452


>ref|XP_003521670.1| PREDICTED: importin subunit alpha-1-like [Glycine max]
          Length = 532

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
 Frame = +2

Query: 80  IAAVTALGAIVRWGSCSDIEVIIEKNAL-RWIRCCLDMKDKWFVKNGCWIVSNIIAKTEN 256
           I A+  +G IV  G     +VII   AL R +    +   K   K  CW +SNI A  + 
Sbjct: 304 IPALRTVGNIVT-GDDLQTQVIINHQALPRLLNILTNNYKKSIKKEACWTISNITAGNKK 362

Query: 257 HIKDVLTPRLIGLLVSIVEYWKLLGVKKEAAWAISNAVFGAEPSEIEGL-KQHLVKPLWS 433
            I+DV+   +I  LV +++  +   +KKEAAWAISNA  G    +I+ L  Q  ++PL  
Sbjct: 363 QIQDVIEASIIAPLVHLLQNAE-FDIKKEAAWAISNATSGGSHEQIKFLVSQGCIRPLCD 421

Query: 434 LVQSLYKVREIVSICLRAL 490
           L+  +     IV++CL  L
Sbjct: 422 LL--ICPDPRIVTVCLEGL 438


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