BLASTX nr result

ID: Bupleurum21_contig00003983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003983
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315940.1| predicted protein [Populus trichocarpa] gi|2...   157   8e-37
ref|XP_002311458.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
gb|ABK95116.1| unknown [Populus trichocarpa]                          152   2e-35
ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   149   2e-34
ref|XP_002531628.1| conserved hypothetical protein [Ricinus comm...   142   3e-32

>ref|XP_002315940.1| predicted protein [Populus trichocarpa] gi|222864980|gb|EEF02111.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  157 bits (397), Expect = 8e-37
 Identities = 82/133 (61%), Positives = 97/133 (72%), Gaps = 5/133 (3%)
 Frame = +1

Query: 1   RRARWYCAADDAFLCQVCDSLVHSANQLASRHERVRLKVASFKLSESVPDDDLVPAWQ-G 177
           +RA WYCAADDAFLCQ CDS VHSAN LA RHERVRLK AS K S++   ++ +P+W  G
Sbjct: 25  KRASWYCAADDAFLCQACDSSVHSANLLARRHERVRLKSASLKSSDAGSKENSMPSWHGG 84

Query: 178 FTRKARTPRHTKPGPNHCVKE-ERMVNSSLVPEMGSEDASLEEENEAQLLYRVPVFDPFA 354
           FTRKARTPRH KP     ++E  R +   LVPE+GS++ SLE+  E  LLYRVP+FDPFA
Sbjct: 85  FTRKARTPRHGKPVSRSKIEETTRNIPIPLVPEVGSDEISLEDNEEEHLLYRVPIFDPFA 144

Query: 355 VELC---NVSNEA 384
            ELC    VSNEA
Sbjct: 145 AELCTSTTVSNEA 157


>ref|XP_002311458.1| predicted protein [Populus trichocarpa] gi|222851278|gb|EEE88825.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  152 bits (385), Expect = 2e-35
 Identities = 79/133 (59%), Positives = 93/133 (69%), Gaps = 5/133 (3%)
 Frame = +1

Query: 1   RRARWYCAADDAFLCQVCDSLVHSANQLASRHERVRLKVASFKLSESVPDDDLVPAWQ-G 177
           +RARWYCAADDAFLCQ CDS VHSAN LA RHERVRLK AS K  +    ++ VP+W  G
Sbjct: 22  KRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTASLKSLDLCSKENSVPSWHGG 81

Query: 178 FTRKARTPRHTKPGPNHCVKEE-RMVNSSLVPEMGSEDASLEEENEAQLLYRVPVFDPFA 354
           FTRKARTPRH KP     + E  R +   LVPE+GS++ S E+  E  LLYRVP+FDPF 
Sbjct: 82  FTRKARTPRHGKPVSQSKIAETIRNIPIPLVPEVGSDEISHEDNEEEHLLYRVPIFDPFV 141

Query: 355 VELC---NVSNEA 384
            +LC    +SNEA
Sbjct: 142 ADLCASTTISNEA 154


>gb|ABK95116.1| unknown [Populus trichocarpa]
          Length = 444

 Score =  152 bits (385), Expect = 2e-35
 Identities = 79/133 (59%), Positives = 93/133 (69%), Gaps = 5/133 (3%)
 Frame = +1

Query: 1   RRARWYCAADDAFLCQVCDSLVHSANQLASRHERVRLKVASFKLSESVPDDDLVPAWQ-G 177
           +RARWYCAADDAFLCQ CDS VHSAN LA RHERVRLK AS K  +    ++ VP+W  G
Sbjct: 25  KRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTASLKSLDLCSKENSVPSWHGG 84

Query: 178 FTRKARTPRHTKPGPNHCVKEE-RMVNSSLVPEMGSEDASLEEENEAQLLYRVPVFDPFA 354
           FTRKARTPRH KP     + E  R +   LVPE+GS++ S E+  E  LLYRVP+FDPF 
Sbjct: 85  FTRKARTPRHGKPVSQSKIAETIRNIPIPLVPEVGSDEISHEDNEEEHLLYRVPIFDPFV 144

Query: 355 VELC---NVSNEA 384
            +LC    +SNEA
Sbjct: 145 ADLCASTTISNEA 157


>ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
           gi|297737819|emb|CBI27020.3| unnamed protein product
           [Vitis vinifera]
          Length = 432

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/132 (57%), Positives = 95/132 (71%), Gaps = 3/132 (2%)
 Frame = +1

Query: 1   RRARWYCAADDAFLCQVCDSLVHSANQLASRHERVRLKVASFKLSESVPDDDLVPAW-QG 177
           +RAR+YCAADDAFLCQ CD  VHSAN LA RHERVRLK AS KL  +   ++ +P+W QG
Sbjct: 25  KRARFYCAADDAFLCQACDMSVHSANPLARRHERVRLKTASLKLPGADSLENSMPSWHQG 84

Query: 178 FTRKARTPRHTKPGPNHCVKEERMVNSSL--VPEMGSEDASLEEENEAQLLYRVPVFDPF 351
           FTRKARTPRH KP  +   K + +  + L  VPE+G+++ S  ++NE QLLYRVP+FDPF
Sbjct: 85  FTRKARTPRHGKPAAHPAFKSDELTRNPLPFVPEIGADETSY-DDNEEQLLYRVPIFDPF 143

Query: 352 AVELCNVSNEAE 387
             ELC  +N  E
Sbjct: 144 VAELCASTNSNE 155


>ref|XP_002531628.1| conserved hypothetical protein [Ricinus communis]
           gi|223528746|gb|EEF30756.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 468

 Score =  142 bits (358), Expect = 3e-32
 Identities = 82/144 (56%), Positives = 99/144 (68%), Gaps = 13/144 (9%)
 Frame = +1

Query: 1   RRARWYCAADDAFLCQVCDSLVHSANQLASRHERVRLKVASFKLSESVPDDD---LVPAW 171
           +RARWYCAADDAFLCQ CDS VHSAN LA RHERVRLK++S K  + +        VP+W
Sbjct: 25  KRARWYCAADDAFLCQSCDSSVHSANPLARRHERVRLKISSLKSLDIISKGSSVITVPSW 84

Query: 172 -QGFTRKARTPRH---TKPGPNHCVKEERMVNS-SLVPEMGSEDASLEEEN--EAQLLYR 330
            QGFTRKARTPR+    KP  +    EE+  N   LVPE+GS+D    E+N  E QLLYR
Sbjct: 85  HQGFTRKARTPRNGHGNKPLLSLLKIEEKSRNPIPLVPEVGSDDQISHEDNNEEEQLLYR 144

Query: 331 VPVFDPFAVELC---NVSNEAEKS 393
           VP+FDPF  ELC    +SNEA+++
Sbjct: 145 VPIFDPFVAELCTPTTISNEADQT 168


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