BLASTX nr result

ID: Bupleurum21_contig00003963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00003963
         (1314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94686.1| unknown [Populus trichocarpa]                          384   e-104
ref|XP_002528545.1| nucleic acid binding protein, putative [Rici...   380   e-103
ref|XP_003534286.1| PREDICTED: uncharacterized protein LOC100797...   372   e-101
gb|ACU23146.1| unknown [Glycine max]                                  371   e-100
ref|XP_003516994.1| PREDICTED: uncharacterized protein LOC100809...   369   e-100

>gb|ABK94686.1| unknown [Populus trichocarpa]
          Length = 280

 Score =  384 bits (986), Expect = e-104
 Identities = 197/278 (70%), Positives = 235/278 (84%)
 Frame = +3

Query: 120 MTIKSVKVSNVSLGATLQDIQEFFSFSGDILYVEMQSHDERSQIAFVTFKDAEGAETAVL 299
           M++K+VKVSNVSLGA+ +D++EFFSFSGDI YVEM+S +ERSQIA+VTFKD++GA+TAVL
Sbjct: 1   MSVKTVKVSNVSLGASERDLKEFFSFSGDIEYVEMKSDNERSQIAYVTFKDSQGADTAVL 60

Query: 300 LSGATIVDSTVTVAVDPEYQXXXXXXXXXXXTENITPKSGGTALNKAEDVVTSMLAKGFV 479
           LSGATIVD +VTVA+DP+YQ           T N  P    +AL KAEDVV+ MLAKGF+
Sbjct: 61  LSGATIVDLSVTVALDPDYQLPPAALAELSATGNKAP-GDESALRKAEDVVSGMLAKGFI 119

Query: 480 LGKDAVSKAKAIDEKHKLTSTASSTVSSFDKKIGFTEKISIGTSIVTDKVKEVDQKLQVS 659
           LGKDA++KAK  DEKH+LTSTAS+ V SFDKKIG TEKIS GT++V DKV+EVDQK QVS
Sbjct: 120 LGKDAINKAKGFDEKHQLTSTASAKVVSFDKKIGLTEKISAGTTVVGDKVREVDQKFQVS 179

Query: 660 DKAKSAFSVAEQKVSSAGSAVMKNRYVFTGATWVTGAFNKVAKAAGEVGQHTKEKVSMAE 839
           +K KSAF+VAEQKVSSAGSA+M NRYVFTGA WVTGAFNKVAKAAG+VGQ  KEK  MAE
Sbjct: 180 EKTKSAFAVAEQKVSSAGSAIMSNRYVFTGAAWVTGAFNKVAKAAGDVGQKAKEKAGMAE 239

Query: 840 DEKRRKMVDEYAQVHLSESPKAAEAIEHKPSKPAPAEG 953
           +E++RKMVD++AQVHLSESPKA+ A + KPSKP PA+G
Sbjct: 240 EEQKRKMVDDFAQVHLSESPKASSASDQKPSKPPPAQG 277


>ref|XP_002528545.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532047|gb|EEF33857.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 275

 Score =  380 bits (975), Expect = e-103
 Identities = 194/278 (69%), Positives = 234/278 (84%)
 Frame = +3

Query: 120 MTIKSVKVSNVSLGATLQDIQEFFSFSGDILYVEMQSHDERSQIAFVTFKDAEGAETAVL 299
           M +++VKVSNVSLGAT +D++EFFSFSGDI YVE++  DE+SQIA+VT+KD++GAETAVL
Sbjct: 1   MRVRTVKVSNVSLGATERDLREFFSFSGDIEYVEVRRDDEKSQIAYVTYKDSQGAETAVL 60

Query: 300 LSGATIVDSTVTVAVDPEYQXXXXXXXXXXXTENITPKSGGTALNKAEDVVTSMLAKGFV 479
           LSGATIVD +V++ +DP+YQ           T+N TP    +AL KAEDVVTSMLAKGF+
Sbjct: 61  LSGATIVDLSVSITLDPDYQLPPAV------TQNKTPGGAESALRKAEDVVTSMLAKGFI 114

Query: 480 LGKDAVSKAKAIDEKHKLTSTASSTVSSFDKKIGFTEKISIGTSIVTDKVKEVDQKLQVS 659
           LGKDAV+KAK  D+KH+LTSTAS+ V S DKKIG T+KIS GT+IV+DKV+EVDQK QVS
Sbjct: 115 LGKDAVNKAKTFDDKHQLTSTASAKVVSLDKKIGLTDKISAGTTIVSDKVREVDQKFQVS 174

Query: 660 DKAKSAFSVAEQKVSSAGSAVMKNRYVFTGATWVTGAFNKVAKAAGEVGQHTKEKVSMAE 839
           +K K+AF+ AEQKVSSAG A+MKNRYVFTGA+WVTGAFNKVAKAAGEVGQ  KEKV MAE
Sbjct: 175 EKTKTAFAAAEQKVSSAGVAIMKNRYVFTGASWVTGAFNKVAKAAGEVGQKAKEKVGMAE 234

Query: 840 DEKRRKMVDEYAQVHLSESPKAAEAIEHKPSKPAPAEG 953
           DE++RKMVD++AQVHLSESPKA+   EH P KPAP +G
Sbjct: 235 DEQKRKMVDDFAQVHLSESPKASSEGEHLPFKPAPVQG 272


>ref|XP_003534286.1| PREDICTED: uncharacterized protein LOC100797009 [Glycine max]
          Length = 280

 Score =  372 bits (956), Expect = e-101
 Identities = 196/279 (70%), Positives = 234/279 (83%), Gaps = 1/279 (0%)
 Frame = +3

Query: 120 MTIKSVKVSNVSLGATLQDIQEFFSFSGDILYVEMQSHDERSQIAFVTFKDAEGAETAVL 299
           MTIK+VKVSNVSLGAT QDI+EFFSFSGDI YVE+QSHDERSQIAF+TFKD++GAETAVL
Sbjct: 1   MTIKTVKVSNVSLGATEQDIKEFFSFSGDIEYVELQSHDERSQIAFITFKDSQGAETAVL 60

Query: 300 LSGATIVDSTVTVAVDPEYQXXXXXXXXXXXTENITPKSGG-TALNKAEDVVTSMLAKGF 476
           LSGATIVD  VT+++DP+YQ            E  TP  G  +A  KAEDVV+ MLAKGF
Sbjct: 61  LSGATIVDMPVTISLDPDYQLPPAALASPVR-ETRTPGGGADSAFRKAEDVVSGMLAKGF 119

Query: 477 VLGKDAVSKAKAIDEKHKLTSTASSTVSSFDKKIGFTEKISIGTSIVTDKVKEVDQKLQV 656
           +LGKDAV+KAK  DEKH+L+STAS+ V+SFD+KIG +EKIS G ++V D+V+EVDQK QV
Sbjct: 120 ILGKDAVNKAKTFDEKHQLSSTASAKVASFDQKIGLSEKISAGATVVGDRVREVDQKFQV 179

Query: 657 SDKAKSAFSVAEQKVSSAGSAVMKNRYVFTGATWVTGAFNKVAKAAGEVGQHTKEKVSMA 836
           S+K KSAF+ AEQ VS+AGSA+MKNRYV TGA+WVTGAF+KV+KAAGEVGQ TKEKV  A
Sbjct: 180 SEKTKSAFAAAEQTVSNAGSAIMKNRYVLTGASWVTGAFSKVSKAAGEVGQKTKEKVESA 239

Query: 837 EDEKRRKMVDEYAQVHLSESPKAAEAIEHKPSKPAPAEG 953
           E++++RK+ D+YAQV LSESPKAAEA E K SKPAPA+G
Sbjct: 240 EEQQKRKVEDQYAQV-LSESPKAAEASEQKSSKPAPAQG 277


>gb|ACU23146.1| unknown [Glycine max]
          Length = 280

 Score =  371 bits (953), Expect = e-100
 Identities = 196/279 (70%), Positives = 233/279 (83%), Gaps = 1/279 (0%)
 Frame = +3

Query: 120 MTIKSVKVSNVSLGATLQDIQEFFSFSGDILYVEMQSHDERSQIAFVTFKDAEGAETAVL 299
           MTIK+VKVSNVSLGAT QDI+EFFSFSGDI YVE+QSHDERSQIAF+TFKD++GAETAVL
Sbjct: 1   MTIKTVKVSNVSLGATEQDIKEFFSFSGDIEYVELQSHDERSQIAFITFKDSQGAETAVL 60

Query: 300 LSGATIVDSTVTVAVDPEYQXXXXXXXXXXXTENITPKSGG-TALNKAEDVVTSMLAKGF 476
           LSGATIVD  VT+++DP+YQ            E  TP  G  +A  KAEDVV+ MLAKGF
Sbjct: 61  LSGATIVDMPVTISLDPDYQLPPAALASPVR-ETRTPGGGADSAFRKAEDVVSGMLAKGF 119

Query: 477 VLGKDAVSKAKAIDEKHKLTSTASSTVSSFDKKIGFTEKISIGTSIVTDKVKEVDQKLQV 656
           +LGKDAV+KAK  DEKH+L+STAS+ V+SFD+KIG +EKIS G ++V D+V+EVDQK QV
Sbjct: 120 ILGKDAVNKAKTFDEKHQLSSTASAKVASFDQKIGLSEKISAGATVVGDRVREVDQKFQV 179

Query: 657 SDKAKSAFSVAEQKVSSAGSAVMKNRYVFTGATWVTGAFNKVAKAAGEVGQHTKEKVSMA 836
           S+K KSAF+ AEQ VS+AGSA+MKNRYV TGA+WVTGAF+KV KAAGEVGQ TKEKV  A
Sbjct: 180 SEKTKSAFAAAEQTVSNAGSAIMKNRYVLTGASWVTGAFSKVFKAAGEVGQKTKEKVESA 239

Query: 837 EDEKRRKMVDEYAQVHLSESPKAAEAIEHKPSKPAPAEG 953
           E++++RK+ D+YAQV LSESPKAAEA E K SKPAPA+G
Sbjct: 240 EEQQKRKVEDQYAQV-LSESPKAAEASEQKSSKPAPAQG 277


>ref|XP_003516994.1| PREDICTED: uncharacterized protein LOC100809613 [Glycine max]
          Length = 279

 Score =  369 bits (948), Expect = e-100
 Identities = 193/278 (69%), Positives = 232/278 (83%)
 Frame = +3

Query: 120 MTIKSVKVSNVSLGATLQDIQEFFSFSGDILYVEMQSHDERSQIAFVTFKDAEGAETAVL 299
           MTIK+VKVSNVSLGAT QDI+EFFSFSGDI YVE++SHDERSQIA++TFKD++GAETA+L
Sbjct: 1   MTIKTVKVSNVSLGATEQDIKEFFSFSGDIEYVELRSHDERSQIAYITFKDSQGAETALL 60

Query: 300 LSGATIVDSTVTVAVDPEYQXXXXXXXXXXXTENITPKSGGTALNKAEDVVTSMLAKGFV 479
           LSGATIVD  VT+  DP+YQ            E  TP    +AL KAEDVV+ MLAKGF+
Sbjct: 61  LSGATIVDMPVTITQDPDYQLPPAALASSVR-ETQTPGGADSALRKAEDVVSGMLAKGFI 119

Query: 480 LGKDAVSKAKAIDEKHKLTSTASSTVSSFDKKIGFTEKISIGTSIVTDKVKEVDQKLQVS 659
           LGKDAV+KAK  DEKH+L+STAS+ V+SFD+KIG +EKIS G ++V+D+V+EVDQK QVS
Sbjct: 120 LGKDAVNKAKTFDEKHQLSSTASAKVASFDQKIGLSEKISAGATVVSDRVREVDQKFQVS 179

Query: 660 DKAKSAFSVAEQKVSSAGSAVMKNRYVFTGATWVTGAFNKVAKAAGEVGQHTKEKVSMAE 839
           +K KSAF+ AEQ VS+AGSA+MKNRYV TGA+WVTGAF+KV+KAAGEVGQ TKEKV  AE
Sbjct: 180 EKTKSAFAAAEQTVSNAGSALMKNRYVLTGASWVTGAFSKVSKAAGEVGQKTKEKVEGAE 239

Query: 840 DEKRRKMVDEYAQVHLSESPKAAEAIEHKPSKPAPAEG 953
           + ++RK+ D+YAQV LSESPKAAEA E K SKPAPA+G
Sbjct: 240 EHQKRKVEDQYAQV-LSESPKAAEASEQKSSKPAPAQG 276


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